RNA–Protein interactions for RNA: ENST00000567400.1

GINS3-207, Transcript of GINS complex subunit 3, humanhuman

TSL 4

Gene GINS3, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-207ENST00000567400 TMEM143Q96AN5 459 aa8.42□□□□□ -1.06
GINS3-207ENST00000567400 CEP170P1Q96L14 293 aa8.42□□□□□ -1.06
GINS3-207ENST00000567400 NLRP4Q96MN2 994 aa8.42□□□□□ -1.06
GINS3-207ENST00000567400 SCLT1Q96NL6 688 aa8.42□□□□□ -1.06
GINS3-207ENST00000567400 LMAN2LQ9H0V9 348 aa8.42□□□□□ -1.06
GINS3-207ENST00000567400 TTC12Q9H892 705 aaPredicted RBP8.42□□□□□ -1.06
GINS3-207ENST00000567400 MINDY3Q9H8M7 445 aa8.42□□□□□ -1.06
GINS3-207ENST00000567400 CD320Q9NPF0 282 aa8.42□□□□□ -1.06
GINS3-207ENST00000567400 SH2B1Q9NRF2 756 aaPredicted RBP8.42□□□□□ -1.06
GINS3-207ENST00000567400 TYW1Q9NV66 732 aaKnown RBP8.42□□□□□ -1.06
GINS3-207ENST00000567400 LRFN2Q9ULH4 789 aa8.42□□□□□ -1.06
GINS3-207ENST00000567400 A0A087WWV3 80 aa8.41□□□□□ -1.06
GINS3-207ENST00000567400 LINC01565O15544 149 aa8.41□□□□□ -1.06
GINS3-207ENST00000567400 TBX10O75333 385 aa8.41□□□□□ -1.06
GINS3-207ENST00000567400 SPATA31C1P0DKV0 1188 aa8.41□□□□□ -1.06
GINS3-207ENST00000567400 HOXA11P31270 313 aaPredicted RBP8.41□□□□□ -1.06
GINS3-207ENST00000567400 TXKP42681 527 aa8.41□□□□□ -1.06
GINS3-207ENST00000567400 DNM2P50570 870 aa8.41□□□□□ -1.06
GINS3-207ENST00000567400 POLGP54098 1239 aaPredicted RBP8.41□□□□□ -1.06
GINS3-207ENST00000567400 LAMTOR4Q0VGL1 99 aa8.41□□□□□ -1.06
GINS3-207ENST00000567400 TRIM29Q14134 588 aa8.41□□□□□ -1.06
GINS3-207ENST00000567400 NBR1Q14596 966 aa8.41□□□□□ -1.06
GINS3-207ENST00000567400 EMC2Q15006 297 aa8.41□□□□□ -1.06
GINS3-207ENST00000567400 NAALADL2Q58DX5 795 aa8.41□□□□□ -1.06
GINS3-207ENST00000567400 TPH2Q8IWU9 490 aa8.41□□□□□ -1.06
GINS3-207ENST00000567400 COLGALT1Q8NBJ5 622 aa8.41□□□□□ -1.06
GINS3-207ENST00000567400 POF1BQ8WVV4 589 aa8.41□□□□□ -1.06
GINS3-207ENST00000567400 PRPF31Q8WWY3 499 aaKnown RBP8.41□□□□□ -1.06
GINS3-207ENST00000567400 SLC7A3Q8WY07 619 aa8.41□□□□□ -1.06
GINS3-207ENST00000567400 PABPC5Q96DU9 382 aaKnown RBP8.41□□□□□ -1.06
GINS3-207ENST00000567400 C8orf76Q96K31 380 aa8.41□□□□□ -1.06
GINS3-207ENST00000567400 ZSCAN31Q96LW9 406 aaPredicted RBP8.41□□□□□ -1.06
GINS3-207ENST00000567400 TRAIPQ9BWF2 469 aa8.41□□□□□ -1.06
GINS3-207ENST00000567400 GCOM2Q9BZD3 368 aaPredicted RBP8.41□□□□□ -1.06
GINS3-207ENST00000567400 TMEM117Q9H0C3 514 aa8.41□□□□□ -1.06
GINS3-207ENST00000567400 FOXP1Q9H334 677 aaPredicted RBP8.41□□□□□ -1.06
GINS3-207ENST00000567400 ZSWIM4Q9H7M6 989 aa8.41□□□□□ -1.06
GINS3-207ENST00000567400 ATP6V0A4Q9HBG4 840 aa8.41□□□□□ -1.06
GINS3-207ENST00000567400 PCDHA12Q9UN75 941 aa8.41□□□□□ -1.06
GINS3-207ENST00000567400 COL4A3BPQ9Y5P4 624 aa8.41□□□□□ -1.06
GINS3-207ENST00000567400 FSCN2O14926 492 aa8.4□□□□□ -1.06
GINS3-207ENST00000567400 MARCH6O60337 910 aa8.4□□□□□ -1.06
GINS3-207ENST00000567400 B4GALT3O60512 393 aa8.4□□□□□ -1.06
GINS3-207ENST00000567400 MED24O75448 989 aa8.4□□□□□ -1.06
GINS3-207ENST00000567400 FGF18O76093 207 aa8.4□□□□□ -1.06
GINS3-207ENST00000567400 BAG4O95429 457 aaKnown RBP8.4□□□□□ -1.06
GINS3-207ENST00000567400 GLP2RO95838 553 aa8.4□□□□□ -1.06
GINS3-207ENST00000567400 IL9P15248 144 aa8.4□□□□□ -1.06
GINS3-207ENST00000567400 ZSCAN20P17040 1043 aaPredicted RBP8.4□□□□□ -1.06
GINS3-207ENST00000567400 ATP2B1P20020 1258 aa8.4□□□□□ -1.06
GINS3-207ENST00000567400 SFPQP23246 707 aaKnown RBP eCLIP8.4□□□□□ -1.06
GINS3-207ENST00000567400 U2AF2P26368 475 aaKnown RBP eCLIP8.4□□□□□ -1.06
GINS3-207ENST00000567400 RFC5P40937 340 aa8.4□□□□□ -1.06
GINS3-207ENST00000567400 PHKA2P46019 1235 aa8.4□□□□□ -1.06
GINS3-207ENST00000567400 RARRES1P49788 294 aa8.4□□□□□ -1.06
GINS3-207ENST00000567400 TOB1P50616 345 aaPredicted RBP8.4□□□□□ -1.06
GINS3-207ENST00000567400 HMGN5P82970 282 aaKnown RBP8.4□□□□□ -1.06
GINS3-207ENST00000567400 RBM10P98175 930 aaKnown RBP8.4□□□□□ -1.06
GINS3-207ENST00000567400 CDC42EP1Q00587 391 aa8.4□□□□□ -1.06
GINS3-207ENST00000567400 RABEP1Q15276 862 aa8.4□□□□□ -1.06
GINS3-207ENST00000567400 LONRF3Q496Y0 759 aa8.4□□□□□ -1.06
GINS3-207ENST00000567400 XKR9Q5GH70 373 aa8.4□□□□□ -1.06
GINS3-207ENST00000567400 UBXN11Q5T124 520 aa8.4□□□□□ -1.06
GINS3-207ENST00000567400 PTCRAQ6ISU1 281 aaPredicted RBP8.4□□□□□ -1.06
GINS3-207ENST00000567400 FERMT3Q86UX7 667 aa8.4□□□□□ -1.06
GINS3-207ENST00000567400 NOSTRINQ8IVI9 506 aa8.4□□□□□ -1.06
GINS3-207ENST00000567400 C4orf32Q8N8J7 132 aa8.4□□□□□ -1.06
GINS3-207ENST00000567400 RNF169Q8NCN4 708 aa8.4□□□□□ -1.06
GINS3-207ENST00000567400 IL27Q8NEV9 243 aa8.4□□□□□ -1.06
GINS3-207ENST00000567400 VN1R2Q8NFZ6 395 aa8.4□□□□□ -1.06
GINS3-207ENST00000567400 HELQQ8TDG4 1101 aa8.4□□□□□ -1.06
GINS3-207ENST00000567400 ASAP3Q8TDY4 903 aa8.4□□□□□ -1.06
GINS3-207ENST00000567400 PIGOQ8TEQ8 1089 aa8.4□□□□□ -1.06
GINS3-207ENST00000567400 PSPC1Q8WXF1 523 aaKnown RBP8.4□□□□□ -1.06
GINS3-207ENST00000567400 LPPQ93052 612 aa8.4□□□□□ -1.06
GINS3-207ENST00000567400 JPH2Q9BR39 696 aaPredicted RBP8.4□□□□□ -1.06
GINS3-207ENST00000567400 AGPAT5Q9NUQ2 364 aa8.4□□□□□ -1.06
GINS3-207ENST00000567400 CLDND1Q9NY35 253 aa8.4□□□□□ -1.06
GINS3-207ENST00000567400 PIN4Q9Y237 131 aaKnown RBP8.4□□□□□ -1.06
GINS3-207ENST00000567400 PPME1Q9Y570 386 aa8.4□□□□□ -1.06
GINS3-207ENST00000567400 GRXCR2A6NFK2 248 aa8.39□□□□□ -1.07
GINS3-207ENST00000567400 GAS2O43903 313 aaKnown RBP8.39□□□□□ -1.07
GINS3-207ENST00000567400 DKC1O60832 514 aaKnown RBP eCLIP8.39□□□□□ -1.07
GINS3-207ENST00000567400 EOMESO95936 686 aa8.39□□□□□ -1.07
GINS3-207ENST00000567400 SRGAP2CP0DJJ0 459 aa8.39□□□□□ -1.07
GINS3-207ENST00000567400 LAG3P18627 525 aa8.39□□□□□ -1.07
GINS3-207ENST00000567400 AFF1P51825 1210 aaKnown RBP8.39□□□□□ -1.07
GINS3-207ENST00000567400 ERVFC1P60507 584 aa8.39□□□□□ -1.07
GINS3-207ENST00000567400 ADAM15Q13444 863 aa8.39□□□□□ -1.07
GINS3-207ENST00000567400 CAPSQ13938 189 aa8.39□□□□□ -1.07
GINS3-207ENST00000567400 SAFBQ15424 915 aaKnown RBP eCLIP8.39□□□□□ -1.07
GINS3-207ENST00000567400 ZNF174Q15697 407 aa8.39□□□□□ -1.07
GINS3-207ENST00000567400 ECM1Q16610 540 aa8.39□□□□□ -1.07
GINS3-207ENST00000567400 TWF2Q6IBS0 349 aaKnown RBP8.39□□□□□ -1.07
GINS3-207ENST00000567400 POTEGQ6S5H5 508 aa8.39□□□□□ -1.07
GINS3-207ENST00000567400 OTUD6AQ7L8S5 288 aa8.39□□□□□ -1.07
GINS3-207ENST00000567400 CATSPER4Q7RTX7 472 aa8.39□□□□□ -1.07
GINS3-207ENST00000567400 TMEM173Q86WV6 379 aaPredicted RBP8.39□□□□□ -1.07
GINS3-207ENST00000567400 CATSPER3Q86XQ3 398 aa8.39□□□□□ -1.07
GINS3-207ENST00000567400 FAM178BQ8IXR5 827 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms