RNA–Protein interactions for RNA: ENST00000566292.5

USB1-213, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-213ENST00000566292 SMAD2Q15796 467 aaKnown RBP20.54■□□□□ 0.88
USB1-213ENST00000566292 ZNF410Q86VK4 478 aa20.54■□□□□ 0.88
USB1-213ENST00000566292 RHPN2Q8IUC4 686 aa20.54■□□□□ 0.88
USB1-213ENST00000566292 KSR1Q8IVT5 923 aa20.54■□□□□ 0.88
USB1-213ENST00000566292 RNF169Q8NCN4 708 aa20.54■□□□□ 0.88
USB1-213ENST00000566292 MSLNLQ96KJ4 702 aa20.54■□□□□ 0.88
USB1-213ENST00000566292 NAP1L4Q99733 375 aaKnown RBP20.54■□□□□ 0.88
USB1-213ENST00000566292 LRFN3Q9BTN0 628 aa20.54■□□□□ 0.88
USB1-213ENST00000566292 TLR9Q9NR96 1032 aa20.54■□□□□ 0.88
USB1-213ENST00000566292 CLEC1BQ9P126 229 aa20.54■□□□□ 0.88
USB1-213ENST00000566292 PRKAG3Q9UGI9 489 aa20.54■□□□□ 0.88
USB1-213ENST00000566292 CD207Q9UJ71 328 aa20.54■□□□□ 0.88
USB1-213ENST00000566292 C19orf67A6NJJ6 358 aa20.53■□□□□ 0.88
USB1-213ENST00000566292 GLP2RO95838 553 aa20.53■□□□□ 0.88
USB1-213ENST00000566292 NDUFV1P49821 464 aa20.53■□□□□ 0.88
USB1-213ENST00000566292 SPIRE1Q08AE8 756 aa20.53■□□□□ 0.88
USB1-213ENST00000566292 SMAD4Q13485 552 aaKnown RBP20.53■□□□□ 0.88
USB1-213ENST00000566292 EPHA7Q15375 998 aa20.53■□□□□ 0.88
USB1-213ENST00000566292 CSPP1Q1MSJ5 1256 aa20.53■□□□□ 0.88
USB1-213ENST00000566292 LRRC43Q8N309 656 aa20.53■□□□□ 0.88
USB1-213ENST00000566292 DACT1Q9NYF0 836 aa20.53■□□□□ 0.88
USB1-213ENST00000566292 RGL1Q9NZL6 768 aa20.53■□□□□ 0.88
USB1-213ENST00000566292 FAM86C2PA6NEL3 165 aa20.52■□□□□ 0.88
USB1-213ENST00000566292 FSCN2O14926 492 aa20.52■□□□□ 0.88
USB1-213ENST00000566292 JAK2O60674 1132 aa20.52■□□□□ 0.88
USB1-213ENST00000566292 EOMESO95936 686 aa20.52■□□□□ 0.88
USB1-213ENST00000566292 PBX3P40426 434 aa20.52■□□□□ 0.88
USB1-213ENST00000566292 NEK4P51957 841 aa20.52■□□□□ 0.88
USB1-213ENST00000566292 PLCB3Q01970 1234 aa20.52■□□□□ 0.88
USB1-213ENST00000566292 ST3GAL1Q11201 340 aa20.52■□□□□ 0.88
USB1-213ENST00000566292 TMEM31Q5JXX7 168 aa20.52■□□□□ 0.88
USB1-213ENST00000566292 NCAPH2Q6IBW4 605 aa20.52■□□□□ 0.88
USB1-213ENST00000566292 KCNT2Q6UVM3 1135 aa20.52■□□□□ 0.88
USB1-213ENST00000566292 ADHFE1Q8IWW8 467 aa20.52■□□□□ 0.88
USB1-213ENST00000566292 C4orf19Q8IY42 314 aa20.52■□□□□ 0.88
USB1-213ENST00000566292 ABI1Q8IZP0 508 aa20.52■□□□□ 0.88
USB1-213ENST00000566292 HELQQ8TDG4 1101 aa20.52■□□□□ 0.88
USB1-213ENST00000566292 MICAL1Q8TDZ2 1067 aa20.52■□□□□ 0.88
USB1-213ENST00000566292 JPH2Q9BR39 696 aaPredicted RBP20.52■□□□□ 0.88
USB1-213ENST00000566292 LXNQ9BS40 222 aa20.52■□□□□ 0.88
USB1-213ENST00000566292 CHST12Q9NRB3 414 aa20.52■□□□□ 0.88
USB1-213ENST00000566292 PER2O15055 1255 aa20.51■□□□□ 0.87
USB1-213ENST00000566292 MARCH6O60337 910 aa20.51■□□□□ 0.87
USB1-213ENST00000566292 DKC1O60832 514 aaKnown RBP eCLIP20.51■□□□□ 0.871e-5■■■■□ 25.7
USB1-213ENST00000566292 GPR37L1O60883 481 aa20.51■□□□□ 0.87
USB1-213ENST00000566292 EYA4O95677 639 aa20.51■□□□□ 0.87
USB1-213ENST00000566292 SFPQP23246 707 aaKnown RBP eCLIP20.51■□□□□ 0.87
USB1-213ENST00000566292 FOSBP53539 338 aa20.51■□□□□ 0.87
USB1-213ENST00000566292 MRPS27Q92552 414 aaKnown RBP20.51■□□□□ 0.87
USB1-213ENST00000566292 DYDC2Q96IM9 177 aa20.51■□□□□ 0.87
USB1-213ENST00000566292 CEP170P1Q96L14 293 aa20.51■□□□□ 0.87
USB1-213ENST00000566292 NLRP4Q96MN2 994 aa20.51■□□□□ 0.87
USB1-213ENST00000566292 TRAIPQ9BWF2 469 aa20.51■□□□□ 0.87
USB1-213ENST00000566292 INO80BQ9C086 356 aaPredicted RBP20.51■□□□□ 0.87
USB1-213ENST00000566292 DHX33Q9H6R0 707 aaKnown RBP20.51■□□□□ 0.87
USB1-213ENST00000566292 TLE6Q9H808 572 aa20.51■□□□□ 0.87
USB1-213ENST00000566292 IFT122Q9HBG6 1241 aa20.51■□□□□ 0.87
USB1-213ENST00000566292 BRMS1Q9HCU9 246 aa20.51■□□□□ 0.87
USB1-213ENST00000566292 BARX2Q9UMQ3 279 aaPredicted RBP20.51■□□□□ 0.87
USB1-213ENST00000566292 LZTS1Q9Y250 596 aa20.51■□□□□ 0.87
USB1-213ENST00000566292 BTBD18B2RXH4 712 aa20.5■□□□□ 0.87
USB1-213ENST00000566292 WNT7AO00755 349 aa20.5■□□□□ 0.87
USB1-213ENST00000566292 ZBTB39O15060 712 aa20.5■□□□□ 0.87
USB1-213ENST00000566292 PHKA2P46019 1235 aa20.5■□□□□ 0.87
USB1-213ENST00000566292 RBM10P98175 930 aaKnown RBP20.5■□□□□ 0.87
USB1-213ENST00000566292 CTTNQ14247 550 aaKnown RBP20.5■□□□□ 0.87
USB1-213ENST00000566292 SLFN12Q8IYM2 578 aa20.5■□□□□ 0.87
USB1-213ENST00000566292 VN1R2Q8NFZ6 395 aa20.5■□□□□ 0.87
USB1-213ENST00000566292 SLC7A3Q8WY07 619 aa20.5■□□□□ 0.87
USB1-213ENST00000566292 ZNF558Q96NG5 402 aa20.5■□□□□ 0.87
USB1-213ENST00000566292 PIN4Q9Y237 131 aaKnown RBP20.5■□□□□ 0.87
USB1-213ENST00000566292 COL4A3BPQ9Y5P4 624 aa20.5■□□□□ 0.87
USB1-213ENST00000566292 BAG4O95429 457 aaKnown RBP20.49■□□□□ 0.87
USB1-213ENST00000566292 YWHABP31946 246 aaKnown RBP20.49■□□□□ 0.87
USB1-213ENST00000566292 POLGP54098 1239 aaPredicted RBP20.49■□□□□ 0.87
USB1-213ENST00000566292 CYP4A11Q02928 519 aa20.49■□□□□ 0.87
USB1-213ENST00000566292 COASYQ13057 564 aa20.49■□□□□ 0.87
USB1-213ENST00000566292 DUSP6Q16828 381 aa20.49■□□□□ 0.87
USB1-213ENST00000566292 PLPP4Q5VZY2 271 aa20.49■□□□□ 0.87
USB1-213ENST00000566292 TWF2Q6IBS0 349 aaKnown RBP20.49■□□□□ 0.87
USB1-213ENST00000566292 PDE12Q6L8Q7 609 aaKnown RBP20.49■□□□□ 0.87
USB1-213ENST00000566292 CATSPER4Q7RTX7 472 aa20.49■□□□□ 0.87
USB1-213ENST00000566292 DIS3L2Q8IYB7 885 aaKnown RBP20.49■□□□□ 0.87
USB1-213ENST00000566292 SMRP1Q8NCR6 262 aa20.49■□□□□ 0.87
USB1-213ENST00000566292 LPPQ93052 612 aa20.49■□□□□ 0.87
USB1-213ENST00000566292 TMEM143Q96AN5 459 aa20.49■□□□□ 0.87
USB1-213ENST00000566292 BMP2KQ9NSY1 1161 aaPredicted RBP20.49■□□□□ 0.87
USB1-213ENST00000566292 PPME1Q9Y570 386 aa20.49■□□□□ 0.87
USB1-213ENST00000566292 MEIS3P2A8K0S8 358 aa20.48■□□□□ 0.87
USB1-213ENST00000566292 PPM1AP35813 382 aa20.48■□□□□ 0.87
USB1-213ENST00000566292 RFC5P40937 340 aa20.48■□□□□ 0.87
USB1-213ENST00000566292 SLC39A11Q8N1S5 342 aa20.48■□□□□ 0.87
USB1-213ENST00000566292 PRPF31Q8WWY3 499 aaKnown RBP20.48■□□□□ 0.87
USB1-213ENST00000566292 TCF25Q9BQ70 676 aa20.48■□□□□ 0.87
USB1-213ENST00000566292 ZSWIM4Q9H7M6 989 aa20.48■□□□□ 0.87
USB1-213ENST00000566292 MINDY3Q9H8M7 445 aa20.48■□□□□ 0.87
USB1-213ENST00000566292 SPG21Q9NZD8 308 aa20.48■□□□□ 0.87
USB1-213ENST00000566292 EIF5BO60841 1220 aaKnown RBP20.47■□□□□ 0.87
USB1-213ENST00000566292 SLITRK3O94933 977 aa20.47■□□□□ 0.87
USB1-213ENST00000566292 LAMTOR4Q0VGL1 99 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms