RNA–Protein interactions for RNA: ENST00000566016.5

SHCBP1-205, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 1 (best)

Gene SHCBP1, Length 1,482 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-205ENST00000566016 SFPQP23246 707 aaKnown RBP eCLIP23.36■■□□□ 1.33
SHCBP1-205ENST00000566016 GLRA2P23416 452 aa23.36■■□□□ 1.33
SHCBP1-205ENST00000566016 PHKA2P46019 1235 aa23.36■■□□□ 1.33
SHCBP1-205ENST00000566016 SLC12A3P55017 1021 aa23.36■■□□□ 1.33
SHCBP1-205ENST00000566016 DEFB103AP81534 67 aa23.36■■□□□ 1.33
SHCBP1-205ENST00000566016 NFX1Q12986 1120 aaKnown RBP23.36■■□□□ 1.33
SHCBP1-205ENST00000566016 PCBP1Q15365 356 aaKnown RBP eCLIP23.36■■□□□ 1.33
SHCBP1-205ENST00000566016 SPECC1Q5M775 1068 aa23.36■■□□□ 1.33
SHCBP1-205ENST00000566016 RNF149Q8NC42 400 aa23.36■■□□□ 1.33
SHCBP1-205ENST00000566016 ASAP3Q8TDY4 903 aa23.36■■□□□ 1.33
SHCBP1-205ENST00000566016 KIFAP3Q92845 792 aa23.36■■□□□ 1.33
SHCBP1-205ENST00000566016 ZNF668Q96K58 619 aaPredicted RBP23.36■■□□□ 1.33
SHCBP1-205ENST00000566016 TMX1Q9H3N1 280 aa23.36■■□□□ 1.33
SHCBP1-205ENST00000566016 BLOC1S4Q9NUP1 217 aa23.36■■□□□ 1.33
SHCBP1-205ENST00000566016 STK17AQ9UEE5 414 aa23.36■■□□□ 1.33
SHCBP1-205ENST00000566016 COL4A6Q14031 1691 aa23.36■■□□□ 1.33
SHCBP1-205ENST00000566016 PLA2G4BP0C869 781 aa23.36■■□□□ 1.33
SHCBP1-205ENST00000566016 GUCY2CP25092 1073 aa23.36■■□□□ 1.33
SHCBP1-205ENST00000566016 PTENP60484 403 aa23.36■■□□□ 1.33
SHCBP1-205ENST00000566016 CAPSQ13938 189 aa23.36■■□□□ 1.33
SHCBP1-205ENST00000566016 AXDND1Q5T1B0 1012 aaPredicted RBP23.36■■□□□ 1.33
SHCBP1-205ENST00000566016 RINT1Q6NUQ1 792 aa23.36■■□□□ 1.33
SHCBP1-205ENST00000566016 C1orf186Q6ZWK4 172 aa23.36■■□□□ 1.33
SHCBP1-205ENST00000566016 HERC6Q8IVU3 1022 aa23.36■■□□□ 1.33
SHCBP1-205ENST00000566016 PLIN2Q99541 437 aa23.36■■□□□ 1.33
SHCBP1-205ENST00000566016 GPRC5CQ9NQ84 441 aa23.36■■□□□ 1.33
SHCBP1-205ENST00000566016 SRGAP2CP0DJJ0 459 aa23.35■■□□□ 1.33
SHCBP1-205ENST00000566016 PPP2R5AQ15172 486 aa23.35■■□□□ 1.33
SHCBP1-205ENST00000566016 FAM102BQ5T8I3 360 aa23.35■■□□□ 1.33
SHCBP1-205ENST00000566016 LIN28BQ6ZN17 250 aaKnown RBP eCLIP23.35■■□□□ 1.33
SHCBP1-205ENST00000566016 LRRC15Q8TF66 581 aa23.35■■□□□ 1.33
SHCBP1-205ENST00000566016 LINC01599Q8WXQ3 324 aa23.35■■□□□ 1.33
SHCBP1-205ENST00000566016 RUSC1Q9BVN2 902 aa23.35■■□□□ 1.33
SHCBP1-205ENST00000566016 SCAND2PQ9GZW5 306 aaPredicted RBP23.35■■□□□ 1.33
SHCBP1-205ENST00000566016 ENPP3O14638 875 aa23.34■■□□□ 1.33
SHCBP1-205ENST00000566016 GJB5O95377 273 aa23.34■■□□□ 1.33
SHCBP1-205ENST00000566016 ME1P48163 572 aa23.34■■□□□ 1.33
SHCBP1-205ENST00000566016 RAB30Q15771 203 aa23.34■■□□□ 1.33
SHCBP1-205ENST00000566016 CCDC73Q6ZRK6 1079 aa23.34■■□□□ 1.33
SHCBP1-205ENST00000566016 LARP4BQ92615 738 aaKnown RBP23.34■■□□□ 1.33
SHCBP1-205ENST00000566016 RAD54LQ92698 747 aa23.34■■□□□ 1.33
SHCBP1-205ENST00000566016 DRC1Q96MC2 740 aa23.34■■□□□ 1.33
SHCBP1-205ENST00000566016 C17orf75Q9HAS0 396 aa23.34■■□□□ 1.33
SHCBP1-205ENST00000566016 C1orf112Q9NSG2 853 aa23.34■■□□□ 1.33
SHCBP1-205ENST00000566016 PCDHA11Q9Y5I1 949 aa23.34■■□□□ 1.33
SHCBP1-205ENST00000566016 CHD7Q9P2D1 2997 aa23.34■■□□□ 1.33
SHCBP1-205ENST00000566016 MYO9BQ13459 2157 aa23.33■■□□□ 1.33
SHCBP1-205ENST00000566016 CDH23Q9H251 3354 aa23.33■■□□□ 1.33
SHCBP1-205ENST00000566016 TMEM265A0A087WTH1 108 aa23.33■■□□□ 1.33
SHCBP1-205ENST00000566016 RBAK-RBAKDNI3L0D1 243 aa23.33■■□□□ 1.33
SHCBP1-205ENST00000566016 NAMPTP43490 491 aa23.33■■□□□ 1.33
SHCBP1-205ENST00000566016 DSC3Q14574 896 aa23.33■■□□□ 1.33
SHCBP1-205ENST00000566016 CDCA2Q69YH5 1023 aaPredicted RBP23.33■■□□□ 1.33
SHCBP1-205ENST00000566016 MAEAQ7L5Y9 396 aa23.33■■□□□ 1.33
SHCBP1-205ENST00000566016 MYOCDQ8IZQ8 938 aa23.33■■□□□ 1.33
SHCBP1-205ENST00000566016 LEO1Q8WVC0 666 aaPredicted RBP23.33■■□□□ 1.33
SHCBP1-205ENST00000566016 TOP1MTQ969P6 601 aa23.33■■□□□ 1.33
SHCBP1-205ENST00000566016 PBX4Q9BYU1 374 aa23.33■■□□□ 1.33
SHCBP1-205ENST00000566016 CHST12Q9NRB3 414 aa23.33■■□□□ 1.33
SHCBP1-205ENST00000566016 RGS18Q9NS28 235 aa23.33■■□□□ 1.33
SHCBP1-205ENST00000566016 PCDHA7Q9UN72 937 aa23.33■■□□□ 1.33
SHCBP1-205ENST00000566016 DENND3A2RUS2 1198 aa23.32■■□□□ 1.32
SHCBP1-205ENST00000566016 GRXCR1A8MXD5 290 aa23.32■■□□□ 1.32
SHCBP1-205ENST00000566016 SSBP05455 408 aaKnown RBP eCLIP23.32■■□□□ 1.32
SHCBP1-205ENST00000566016 NCLP19338 710 aaKnown RBP23.32■■□□□ 1.32
SHCBP1-205ENST00000566016 DNAJB2P25686 324 aa23.32■■□□□ 1.32
SHCBP1-205ENST00000566016 RRAGBQ5VZM2 374 aa23.32■■□□□ 1.32
SHCBP1-205ENST00000566016 RTN4RL1Q86UN2 441 aaPredicted RBP23.32■■□□□ 1.32
SHCBP1-205ENST00000566016 DAW1Q8N136 415 aa23.32■■□□□ 1.32
SHCBP1-205ENST00000566016 LRCH3Q96II8 777 aa23.32■■□□□ 1.32
SHCBP1-205ENST00000566016 SPATA32Q96LK8 384 aa23.32■■□□□ 1.32
SHCBP1-205ENST00000566016 MINDY3Q9H8M7 445 aa23.32■■□□□ 1.32
SHCBP1-205ENST00000566016 RNF216Q9NWF9 866 aaPredicted RBP23.32■■□□□ 1.32
SHCBP1-205ENST00000566016 MGEA5O60502 916 aa23.31■■□□□ 1.32
SHCBP1-205ENST00000566016 CSDE1O75534 798 aaKnown RBP23.31■■□□□ 1.32
SHCBP1-205ENST00000566016 MAPK7Q13164 816 aa23.31■■□□□ 1.32
SHCBP1-205ENST00000566016 NAALADL2Q58DX5 795 aa23.31■■□□□ 1.32
SHCBP1-205ENST00000566016 SHC4Q6S5L8 630 aa23.31■■□□□ 1.32
SHCBP1-205ENST00000566016 SLC24A5Q71RS6 500 aa23.31■■□□□ 1.32
SHCBP1-205ENST00000566016 CRIPAKQ8N1N5 446 aa23.31■■□□□ 1.32
SHCBP1-205ENST00000566016 IFT74Q96LB3 600 aa23.31■■□□□ 1.32
SHCBP1-205ENST00000566016 ADAM2Q99965 735 aa23.31■■□□□ 1.32
SHCBP1-205ENST00000566016 TRAIPQ9BWF2 469 aa23.31■■□□□ 1.32
SHCBP1-205ENST00000566016 AGPAT5Q9NUQ2 364 aa23.31■■□□□ 1.32
SHCBP1-205ENST00000566016 DACT1Q9NYF0 836 aa23.31■■□□□ 1.32
SHCBP1-205ENST00000566016 ODF2LQ9ULJ1 636 aa23.31■■□□□ 1.32
SHCBP1-205ENST00000566016 LRRIQ4A6NIV6 560 aa23.3■■□□□ 1.32
SHCBP1-205ENST00000566016 HIP1RO75146 1068 aa23.3■■□□□ 1.32
SHCBP1-205ENST00000566016 ZSCAN20P17040 1043 aaPredicted RBP23.3■■□□□ 1.32
SHCBP1-205ENST00000566016 MBTD1Q05BQ5 628 aa23.3■■□□□ 1.32
SHCBP1-205ENST00000566016 CATSPER4Q7RTX7 472 aa23.3■■□□□ 1.32
SHCBP1-205ENST00000566016 BSNDQ8WZ55 320 aa23.3■■□□□ 1.32
SHCBP1-205ENST00000566016 C2orf40Q9H1Z8 148 aa23.3■■□□□ 1.32
SHCBP1-205ENST00000566016 MSRAQ9UJ68 235 aa23.3■■□□□ 1.32
SHCBP1-205ENST00000566016 A0A087X0B3 334 aa23.3■■□□□ 1.32
SHCBP1-205ENST00000566016 C9IYK1 514 aa23.3■■□□□ 1.32
SHCBP1-205ENST00000566016 FGFR4P22455 802 aa23.3■■□□□ 1.32
SHCBP1-205ENST00000566016 STAT6P42226 847 aa23.3■■□□□ 1.32
SHCBP1-205ENST00000566016 SARSP49591 514 aaKnown RBP23.3■■□□□ 1.32
SHCBP1-205ENST00000566016 HTRA4P83105 476 aaPredicted RBP23.3■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms