RNA–Protein interactions for RNA: ENST00000565003.5

CMTM3-209, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-209ENST00000565003 ZBTB39O15060 712 aa11.23□□□□□ -0.61
CMTM3-209ENST00000565003 DKC1O60832 514 aaKnown RBP eCLIP11.23□□□□□ -0.61
CMTM3-209ENST00000565003 YWHABP31946 246 aaKnown RBP11.23□□□□□ -0.61
CMTM3-209ENST00000565003 POLGP54098 1239 aaPredicted RBP11.23□□□□□ -0.61
CMTM3-209ENST00000565003 GUCY1B3Q02153 619 aa11.23□□□□□ -0.61
CMTM3-209ENST00000565003 CALCRLQ16602 461 aa11.23□□□□□ -0.61
CMTM3-209ENST00000565003 ZNF598Q86UK7 904 aaKnown RBP11.23□□□□□ -0.61
CMTM3-209ENST00000565003 CCDC83Q8IWF9 413 aa11.23□□□□□ -0.61
CMTM3-209ENST00000565003 FAM178BQ8IXR5 827 aa11.23□□□□□ -0.61
CMTM3-209ENST00000565003 C4orf19Q8IY42 314 aa11.23□□□□□ -0.61
CMTM3-209ENST00000565003 LRRC43Q8N309 656 aa11.23□□□□□ -0.61
CMTM3-209ENST00000565003 SLC7A3Q8WY07 619 aa11.23□□□□□ -0.61
CMTM3-209ENST00000565003 TMEM143Q96AN5 459 aa11.23□□□□□ -0.61
CMTM3-209ENST00000565003 CEP170P1Q96L14 293 aa11.23□□□□□ -0.61
CMTM3-209ENST00000565003 DHX33Q9H6R0 707 aaKnown RBP11.23□□□□□ -0.61
CMTM3-209ENST00000565003 IFT122Q9HBG6 1241 aa11.23□□□□□ -0.61
CMTM3-209ENST00000565003 PCDHB12Q9Y5F1 795 aa11.23□□□□□ -0.61
CMTM3-209ENST00000565003 HOXA2O43364 376 aa11.22□□□□□ -0.61
CMTM3-209ENST00000565003 NCK2O43639 380 aa11.22□□□□□ -0.61
CMTM3-209ENST00000565003 NEMFO60524 1076 aa11.22□□□□□ -0.61
CMTM3-209ENST00000565003 FGF18O76093 207 aa11.22□□□□□ -0.61
CMTM3-209ENST00000565003 SLITRK3O94933 977 aa11.22□□□□□ -0.61
CMTM3-209ENST00000565003 BAG4O95429 457 aaKnown RBP11.22□□□□□ -0.61
CMTM3-209ENST00000565003 LAG3P18627 525 aa11.22□□□□□ -0.61
CMTM3-209ENST00000565003 SFPQP23246 707 aaKnown RBP eCLIP11.22□□□□□ -0.61
CMTM3-209ENST00000565003 PBX3P40426 434 aa11.22□□□□□ -0.61
CMTM3-209ENST00000565003 CDC42EP1Q00587 391 aa11.22□□□□□ -0.61
CMTM3-209ENST00000565003 UBE3AQ05086 875 aa11.22□□□□□ -0.61
CMTM3-209ENST00000565003 TRIM29Q14134 588 aa11.22□□□□□ -0.61
CMTM3-209ENST00000565003 EMC2Q15006 297 aa11.22□□□□□ -0.61
CMTM3-209ENST00000565003 CLUL1Q15846 466 aa11.22□□□□□ -0.61
CMTM3-209ENST00000565003 ARID2Q68CP9 1835 aa11.22□□□□□ -0.61
CMTM3-209ENST00000565003 THNSL1Q8IYQ7 743 aa11.22□□□□□ -0.61
CMTM3-209ENST00000565003 ABI1Q8IZP0 508 aa11.22□□□□□ -0.61
CMTM3-209ENST00000565003 EIF2AK1Q9BQI3 630 aaKnown RBP11.22□□□□□ -0.61
CMTM3-209ENST00000565003 JPH2Q9BR39 696 aaPredicted RBP11.22□□□□□ -0.61
CMTM3-209ENST00000565003 IGFLR1Q9H665 355 aa11.22□□□□□ -0.61
CMTM3-209ENST00000565003 EPHX3Q9H6B9 360 aa11.22□□□□□ -0.61
CMTM3-209ENST00000565003 ZSWIM4Q9H7M6 989 aa11.22□□□□□ -0.61
CMTM3-209ENST00000565003 TTC12Q9H892 705 aaPredicted RBP11.22□□□□□ -0.61
CMTM3-209ENST00000565003 CHST12Q9NRB3 414 aa11.22□□□□□ -0.61
CMTM3-209ENST00000565003 AAASQ9NRG9 546 aa11.22□□□□□ -0.61
CMTM3-209ENST00000565003 DACT1Q9NYF0 836 aa11.22□□□□□ -0.61
CMTM3-209ENST00000565003 PIN4Q9Y237 131 aaKnown RBP11.22□□□□□ -0.61
CMTM3-209ENST00000565003 COL4A3BPQ9Y5P4 624 aa11.22□□□□□ -0.61
CMTM3-209ENST00000565003 GLP2RO95838 553 aa11.21□□□□□ -0.61
CMTM3-209ENST00000565003 RFC5P40937 340 aa11.21□□□□□ -0.61
CMTM3-209ENST00000565003 PHKA2P46019 1235 aa11.21□□□□□ -0.61
CMTM3-209ENST00000565003 NRIP1P48552 1158 aa11.21□□□□□ -0.61
CMTM3-209ENST00000565003 LAMTOR4Q0VGL1 99 aa11.21□□□□□ -0.61
CMTM3-209ENST00000565003 ADAM15Q13444 863 aa11.21□□□□□ -0.61
CMTM3-209ENST00000565003 PUS10Q3MIT2 529 aaKnown RBP11.21□□□□□ -0.61
CMTM3-209ENST00000565003 XKR9Q5GH70 373 aa11.21□□□□□ -0.61
CMTM3-209ENST00000565003 TWF2Q6IBS0 349 aaKnown RBP11.21□□□□□ -0.61
CMTM3-209ENST00000565003 CATSPER4Q7RTX7 472 aa11.21□□□□□ -0.61
CMTM3-209ENST00000565003 RBM23Q86U06 439 aaKnown RBP11.21□□□□□ -0.61
CMTM3-209ENST00000565003 TPH2Q8IWU9 490 aa11.21□□□□□ -0.61
CMTM3-209ENST00000565003 EFHBQ8N7U6 833 aa11.21□□□□□ -0.61
CMTM3-209ENST00000565003 HELQQ8TDG4 1101 aa11.21□□□□□ -0.61
CMTM3-209ENST00000565003 PSPC1Q8WXF1 523 aaKnown RBP11.21□□□□□ -0.61
CMTM3-209ENST00000565003 LPPQ93052 612 aa11.21□□□□□ -0.61
CMTM3-209ENST00000565003 PPP2R3CQ969Q6 453 aa11.21□□□□□ -0.61
CMTM3-209ENST00000565003 MTMR9Q96QG7 549 aa11.21□□□□□ -0.61
CMTM3-209ENST00000565003 HSD17B14Q9BPX1 270 aa11.21□□□□□ -0.61
CMTM3-209ENST00000565003 TRAIPQ9BWF2 469 aa11.21□□□□□ -0.61
CMTM3-209ENST00000565003 TMEM60Q9H2L4 133 aa11.21□□□□□ -0.61
CMTM3-209ENST00000565003 MINDY3Q9H8M7 445 aa11.21□□□□□ -0.61
CMTM3-209ENST00000565003 XPNPEP1Q9NQW7 623 aa11.21□□□□□ -0.61
CMTM3-209ENST00000565003 TLR9Q9NR96 1032 aa11.21□□□□□ -0.61
CMTM3-209ENST00000565003 PCDHA12Q9UN75 941 aa11.21□□□□□ -0.61
CMTM3-209ENST00000565003 PPME1Q9Y570 386 aa11.21□□□□□ -0.61
CMTM3-209ENST00000565003 POTEMA6NI47 508 aa11.2□□□□□ -0.62
CMTM3-209ENST00000565003 MEIS3P2A8K0S8 358 aa11.2□□□□□ -0.62
CMTM3-209ENST00000565003 FSCN2O14926 492 aa11.2□□□□□ -0.62
CMTM3-209ENST00000565003 MBTPS2O43462 519 aa11.2□□□□□ -0.62
CMTM3-209ENST00000565003 LYPLA2O95372 231 aa11.2□□□□□ -0.62
CMTM3-209ENST00000565003 EOMESO95936 686 aa11.2□□□□□ -0.62
CMTM3-209ENST00000565003 SRGAP2CP0DJJ0 459 aa11.2□□□□□ -0.62
CMTM3-209ENST00000565003 MCM7P33993 719 aa11.2□□□□□ -0.62
CMTM3-209ENST00000565003 TXKP42681 527 aa11.2□□□□□ -0.62
CMTM3-209ENST00000565003 NDUFV1P49821 464 aa11.2□□□□□ -0.62
CMTM3-209ENST00000565003 ERVFC1P60507 584 aa11.2□□□□□ -0.62
CMTM3-209ENST00000565003 RBM10P98175 930 aaKnown RBP11.2□□□□□ -0.62
CMTM3-209ENST00000565003 PLCB3Q01970 1234 aa11.2□□□□□ -0.62
CMTM3-209ENST00000565003 CSPP1Q1MSJ5 1256 aa11.2□□□□□ -0.62
CMTM3-209ENST00000565003 LONRF3Q496Y0 759 aa11.2□□□□□ -0.62
CMTM3-209ENST00000565003 KCNT2Q6UVM3 1135 aa11.2□□□□□ -0.62
CMTM3-209ENST00000565003 OTUD6AQ7L8S5 288 aa11.2□□□□□ -0.62
CMTM3-209ENST00000565003 FERMT3Q86UX7 667 aa11.2□□□□□ -0.62
CMTM3-209ENST00000565003 GJD3Q8N144 294 aa11.2□□□□□ -0.62
CMTM3-209ENST00000565003 VN1R2Q8NFZ6 395 aa11.2□□□□□ -0.62
CMTM3-209ENST00000565003 MICAL1Q8TDZ2 1067 aa11.2□□□□□ -0.62
CMTM3-209ENST00000565003 PRPF31Q8WWY3 499 aaKnown RBP11.2□□□□□ -0.62
CMTM3-209ENST00000565003 C8orf76Q96K31 380 aa11.2□□□□□ -0.62
CMTM3-209ENST00000565003 ZNF558Q96NG5 402 aa11.2□□□□□ -0.62
CMTM3-209ENST00000565003 MTRQ99707 1265 aa11.2□□□□□ -0.62
CMTM3-209ENST00000565003 LLPHQ9BRT6 129 aaKnown RBP11.2□□□□□ -0.62
CMTM3-209ENST00000565003 INO80BQ9C086 356 aaPredicted RBP11.2□□□□□ -0.62
CMTM3-209ENST00000565003 AGPAT5Q9NUQ2 364 aa11.2□□□□□ -0.62
CMTM3-209ENST00000565003 FAM105AQ9NUU6 356 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms