RNA–Protein interactions for RNA: ENST00000563790.5

HDGFL3-204, Transcript of HDGF like 3, humanhuman

TSL 3

Gene HDGFL3, Length 934 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-204ENST00000563790 CYP2D7A0A087X1C5 515 aa12.58□□□□□ -0.4
HDGFL3-204ENST00000563790 LGALS2P05162 132 aa12.58□□□□□ -0.4
HDGFL3-204ENST00000563790 FGFR1P11362 822 aa12.58□□□□□ -0.4
HDGFL3-204ENST00000563790 ZNF76P36508 570 aa12.58□□□□□ -0.4
HDGFL3-204ENST00000563790 RARSP54136 660 aaKnown RBP12.58□□□□□ -0.4
HDGFL3-204ENST00000563790 FAM193AP78312 1265 aa12.58□□□□□ -0.4
HDGFL3-204ENST00000563790 PAK2Q13177 524 aa12.58□□□□□ -0.4
HDGFL3-204ENST00000563790 SLFN13Q68D06 897 aa12.58□□□□□ -0.4
HDGFL3-204ENST00000563790 GPR155Q7Z3F1 870 aa12.58□□□□□ -0.4
HDGFL3-204ENST00000563790 LRRC43Q8N309 656 aa12.58□□□□□ -0.4
HDGFL3-204ENST00000563790 ZNF512BQ96KM6 892 aaPredicted RBP12.58□□□□□ -0.4
HDGFL3-204ENST00000563790 TMEM117Q9H0C3 514 aa12.58□□□□□ -0.4
HDGFL3-204ENST00000563790 ADAMTS10Q9H324 1103 aa12.58□□□□□ -0.4
HDGFL3-204ENST00000563790 MAN1C1Q9NR34 630 aa12.58□□□□□ -0.4
HDGFL3-204ENST00000563790 FANCIQ9NVI1 1328 aa12.58□□□□□ -0.4
HDGFL3-204ENST00000563790 IGKV6D-41A0A0C4DH26 115 aa12.57□□□□□ -0.4
HDGFL3-204ENST00000563790 CCDC163A0A0D9SF12 145 aa12.57□□□□□ -0.4
HDGFL3-204ENST00000563790 KHNYNO15037 678 aaKnown RBP12.57□□□□□ -0.4
HDGFL3-204ENST00000563790 CFBP00751 764 aa12.57□□□□□ -0.4
HDGFL3-204ENST00000563790 CHRNB1P11230 501 aa12.57□□□□□ -0.4
HDGFL3-204ENST00000563790 KLRC2P26717 231 aa12.57□□□□□ -0.4
HDGFL3-204ENST00000563790 MRPS6P82932 125 aaKnown RBP12.57□□□□□ -0.4
HDGFL3-204ENST00000563790 CREB5Q02930 508 aa12.57□□□□□ -0.4
HDGFL3-204ENST00000563790 CYP4F3Q08477 520 aa12.57□□□□□ -0.4
HDGFL3-204ENST00000563790 SEMA3BQ13214 749 aa12.57□□□□□ -0.4
HDGFL3-204ENST00000563790 PLK5Q496M5 336 aa12.57□□□□□ -0.4
HDGFL3-204ENST00000563790 ZNF574Q6ZN55 896 aaPredicted RBP12.57□□□□□ -0.4
HDGFL3-204ENST00000563790 PHKBQ93100 1093 aa12.57□□□□□ -0.4
HDGFL3-204ENST00000563790 TMEM169Q96HH4 297 aa12.57□□□□□ -0.4
HDGFL3-204ENST00000563790 DCBLD2Q96PD2 775 aa12.57□□□□□ -0.4
HDGFL3-204ENST00000563790 SEMA4CQ9C0C4 833 aa12.57□□□□□ -0.4
HDGFL3-204ENST00000563790 C1orf112Q9NSG2 853 aa12.57□□□□□ -0.4
HDGFL3-204ENST00000563790 MRVI1Q9Y6F6 885 aa12.57□□□□□ -0.4
HDGFL3-204ENST00000563790 IGSF9BQ9UPX0 1349 aa12.57□□□□□ -0.4
HDGFL3-204ENST00000563790 CEP192Q8TEP8 1941 aa12.56□□□□□ -0.4
HDGFL3-204ENST00000563790 C9IYK1 514 aa12.56□□□□□ -0.4
HDGFL3-204ENST00000563790 CCDC192P0DO97 292 aa12.56□□□□□ -0.4
HDGFL3-204ENST00000563790 STXBP2Q15833 593 aa12.56□□□□□ -0.4
HDGFL3-204ENST00000563790 CCDC158Q5M9N0 1113 aa12.56□□□□□ -0.4
HDGFL3-204ENST00000563790 CELF3Q5SZQ8 465 aaKnown RBP12.56□□□□□ -0.4
HDGFL3-204ENST00000563790 SLC24A5Q71RS6 500 aa12.56□□□□□ -0.4
HDGFL3-204ENST00000563790 FMNL3Q8IVF7 1028 aa12.56□□□□□ -0.4
HDGFL3-204ENST00000563790 LIN37Q96GY3 246 aaPredicted RBP12.56□□□□□ -0.4
HDGFL3-204ENST00000563790 GMCL1Q96IK5 515 aa12.56□□□□□ -0.4
HDGFL3-204ENST00000563790 CASD1Q96PB1 797 aa12.56□□□□□ -0.4
HDGFL3-204ENST00000563790 PHF20Q9BVI0 1012 aa12.56□□□□□ -0.4
HDGFL3-204ENST00000563790 TMEM161AQ9NX61 479 aa12.56□□□□□ -0.4
HDGFL3-204ENST00000563790 HSPBP1Q9NZL4 362 aa12.56□□□□□ -0.4
HDGFL3-204ENST00000563790 ISY1Q9ULR0 285 aaKnown RBP12.56□□□□□ -0.4
HDGFL3-204ENST00000563790 MGEA5O60502 916 aa12.55□□□□□ -0.4
HDGFL3-204ENST00000563790 RFPL2O75678 378 aa12.55□□□□□ -0.4
HDGFL3-204ENST00000563790 RASA1P20936 1047 aa12.55□□□□□ -0.4
HDGFL3-204ENST00000563790 HOXC13P31276 330 aa12.55□□□□□ -0.4
HDGFL3-204ENST00000563790 PTGDRQ13258 359 aa12.55□□□□□ -0.4
HDGFL3-204ENST00000563790 TAF1BQ53T94 588 aaPredicted RBP12.55□□□□□ -0.4
HDGFL3-204ENST00000563790 PDXDC1Q6P996 788 aa12.55□□□□□ -0.4
HDGFL3-204ENST00000563790 DNAJB3Q8WWF6 145 aa12.55□□□□□ -0.4
HDGFL3-204ENST00000563790 DNASE1L2Q92874 299 aa12.55□□□□□ -0.4
HDGFL3-204ENST00000563790 EMILIN2Q9BXX0 1053 aa12.55□□□□□ -0.4
HDGFL3-204ENST00000563790 DUSP15Q9H1R2 295 aaPredicted RBP12.55□□□□□ -0.4
HDGFL3-204ENST00000563790 ATP6V0A4Q9HBG4 840 aa12.55□□□□□ -0.4
HDGFL3-204ENST00000563790 RGS18Q9NS28 235 aa12.55□□□□□ -0.4
HDGFL3-204ENST00000563790 CDH7Q9ULB5 785 aa12.55□□□□□ -0.4
HDGFL3-204ENST00000563790 ANKHD1Q8IWZ3 2542 aaKnown RBP12.54□□□□□ -0.4
HDGFL3-204ENST00000563790 A0A1B0GTL3 188 aa12.54□□□□□ -0.4
HDGFL3-204ENST00000563790 CCDC194A0A1B0GVG4 234 aa12.54□□□□□ -0.4
HDGFL3-204ENST00000563790 CNPP09543 421 aaKnown RBP12.54□□□□□ -0.4
HDGFL3-204ENST00000563790 CR2P20023 1033 aa12.54□□□□□ -0.4
HDGFL3-204ENST00000563790 IL12RB1P42701 662 aa12.54□□□□□ -0.4
HDGFL3-204ENST00000563790 LY6DQ14210 128 aa12.54□□□□□ -0.4
HDGFL3-204ENST00000563790 ELMSAN1Q6PJG2 1045 aa12.54□□□□□ -0.4
HDGFL3-204ENST00000563790 DDX53Q86TM3 631 aaKnown RBP12.54□□□□□ -0.4
HDGFL3-204ENST00000563790 AMOTL1Q8IY63 956 aa12.54□□□□□ -0.4
HDGFL3-204ENST00000563790 KXD1Q9BQD3 176 aa12.54□□□□□ -0.4
HDGFL3-204ENST00000563790 RANBP17Q9H2T7 1088 aaKnown RBP12.54□□□□□ -0.4
HDGFL3-204ENST00000563790 ELAC1Q9H777 363 aaKnown RBP12.54□□□□□ -0.4
HDGFL3-204ENST00000563790 ATP8A2Q9NTI2 1148 aa12.54□□□□□ -0.4
HDGFL3-204ENST00000563790 C2orf42Q9NWW7 574 aa12.54□□□□□ -0.4
HDGFL3-204ENST00000563790 DPP7Q9UHL4 492 aa12.54□□□□□ -0.4
HDGFL3-204ENST00000563790 RPLP2P05387 115 aaKnown RBP12.53□□□□□ -0.4
HDGFL3-204ENST00000563790 SLC1A4P43007 532 aa12.53□□□□□ -0.4
HDGFL3-204ENST00000563790 METAP2P50579 478 aaKnown RBP eCLIP12.53□□□□□ -0.4
HDGFL3-204ENST00000563790 SEMA3FQ13275 785 aa12.53□□□□□ -0.4
HDGFL3-204ENST00000563790 HNRNPDQ14103 355 aaKnown RBP12.53□□□□□ -0.4
HDGFL3-204ENST00000563790 UBAP2LQ14157 1087 aaKnown RBP12.53□□□□□ -0.4
HDGFL3-204ENST00000563790 CEP95Q96GE4 821 aa12.53□□□□□ -0.4
HDGFL3-204ENST00000563790 IWS1Q96ST2 819 aa12.53□□□□□ -0.4
HDGFL3-204ENST00000563790 ARID3AQ99856 593 aa12.53□□□□□ -0.4
HDGFL3-204ENST00000563790 ADAM2Q99965 735 aa12.53□□□□□ -0.4
HDGFL3-204ENST00000563790 PIDD1Q9HB75 910 aa12.53□□□□□ -0.4
HDGFL3-204ENST00000563790 RNF19AQ9NV58 838 aa12.53□□□□□ -0.4
HDGFL3-204ENST00000563790 MTMR4Q9NYA4 1195 aa12.53□□□□□ -0.4
HDGFL3-204ENST00000563790 MED13Q9UHV7 2174 aa12.53□□□□□ -0.4
HDGFL3-204ENST00000563790 NBEAL1Q6ZS30 2694 aa12.52□□□□□ -0.41
HDGFL3-204ENST00000563790 NT5C1B-RDH14C9J2C7 533 aa12.52□□□□□ -0.41
HDGFL3-204ENST00000563790 MEFVO15553 781 aaPredicted RBP12.52□□□□□ -0.41
HDGFL3-204ENST00000563790 HOXA2O43364 376 aa12.52□□□□□ -0.41
HDGFL3-204ENST00000563790 GGPS1O95749 300 aa12.52□□□□□ -0.41
HDGFL3-204ENST00000563790 TTLL1O95922 423 aa12.52□□□□□ -0.41
HDGFL3-204ENST00000563790 FSHRP23945 695 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms