RNA–Protein interactions for RNA: ENST00000562543.5

TCF4-213, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 598 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-213ENST00000562543 GPR108Q9NPR9 543 aa7.24□□□□□ -1.25
TCF4-213ENST00000562543 ZSCAN32Q9NX65 697 aa7.24□□□□□ -1.25
TCF4-213ENST00000562543 CDH22Q9UJ99 828 aa7.24□□□□□ -1.25
TCF4-213ENST00000562543 LAMA1P25391 3075 aa7.23□□□□□ -1.25
TCF4-213ENST00000562543 FSD2A1L4K1 749 aa7.23□□□□□ -1.25
TCF4-213ENST00000562543 PRR19A6NJB7 356 aa7.23□□□□□ -1.25
TCF4-213ENST00000562543 DYNC1LI2O43237 492 aaPredicted RBP7.23□□□□□ -1.25
TCF4-213ENST00000562543 FOXD2O60548 495 aaPredicted RBP7.23□□□□□ -1.25
TCF4-213ENST00000562543 PTPN11Q06124 597 aaPredicted RBP7.23□□□□□ -1.25
TCF4-213ENST00000562543 ZNF252P-AS1Q0IIN9 211 aa7.23□□□□□ -1.25
TCF4-213ENST00000562543 TDGQ13569 410 aa7.23□□□□□ -1.25
TCF4-213ENST00000562543 KCNC3Q14003 757 aa7.23□□□□□ -1.25
TCF4-213ENST00000562543 DUOXA2Q1HG44 320 aa7.23□□□□□ -1.25
TCF4-213ENST00000562543 FAM47CQ5HY64 1035 aa7.23□□□□□ -1.25
TCF4-213ENST00000562543 TMEM63BQ5T3F8 832 aa7.23□□□□□ -1.25
TCF4-213ENST00000562543 TTC39BQ5VTQ0 682 aaPredicted RBP7.23□□□□□ -1.25
TCF4-213ENST00000562543 ANKRD54Q6NXT1 300 aa7.23□□□□□ -1.25
TCF4-213ENST00000562543 NFRKBQ6P4R8 1299 aa7.23□□□□□ -1.25
TCF4-213ENST00000562543 TMEM184AQ6ZMB5 413 aa7.23□□□□□ -1.25
TCF4-213ENST00000562543 FIBCD1Q8N539 461 aa7.23□□□□□ -1.25
TCF4-213ENST00000562543 TDRD5Q8NAT2 981 aaKnown RBP7.23□□□□□ -1.25
TCF4-213ENST00000562543 STK32AQ8WU08 396 aa7.23□□□□□ -1.25
TCF4-213ENST00000562543 DHX38Q92620 1227 aaKnown RBP7.23□□□□□ -1.25
TCF4-213ENST00000562543 KLHDC7BQ96G42 594 aa7.23□□□□□ -1.25
TCF4-213ENST00000562543 FAM46AQ96IP4 442 aaKnown RBP7.23□□□□□ -1.25
TCF4-213ENST00000562543 SPACA7Q96KW9 195 aa7.23□□□□□ -1.25
TCF4-213ENST00000562543 TANGO6Q9C0B7 1094 aa7.23□□□□□ -1.25
TCF4-213ENST00000562543 AP5M1Q9H0R1 490 aa7.23□□□□□ -1.25
TCF4-213ENST00000562543 PLAGL2Q9UPG8 496 aa7.23□□□□□ -1.25
TCF4-213ENST00000562543 ACACAQ13085 2346 aa7.22□□□□□ -1.25
TCF4-213ENST00000562543 GSC2O15499 205 aa7.22□□□□□ -1.25
TCF4-213ENST00000562543 SMNDC1O75940 238 aaKnown RBP eCLIP7.22□□□□□ -1.25
TCF4-213ENST00000562543 PDE8BO95263 885 aa7.22□□□□□ -1.25
TCF4-213ENST00000562543 MAP4K4O95819 1239 aaPredicted RBP7.22□□□□□ -1.25
TCF4-213ENST00000562543 FGFR2P21802 821 aa7.22□□□□□ -1.25
TCF4-213ENST00000562543 COPB2P35606 906 aa7.22□□□□□ -1.25
TCF4-213ENST00000562543 ZAP70P43403 619 aa7.22□□□□□ -1.25
TCF4-213ENST00000562543 PLCD1P51178 756 aa7.22□□□□□ -1.25
TCF4-213ENST00000562543 TROAPQ12815 778 aa7.22□□□□□ -1.25
TCF4-213ENST00000562543 PHLDB3Q6NSJ2 640 aa7.22□□□□□ -1.25
TCF4-213ENST00000562543 NOL8Q76FK4 1167 aaKnown RBP7.22□□□□□ -1.25
TCF4-213ENST00000562543 ZNF843Q8N446 348 aa7.22□□□□□ -1.25
TCF4-213ENST00000562543 FAM133AQ8N9E0 248 aa7.22□□□□□ -1.25
TCF4-213ENST00000562543 PPP1R13LQ8WUF5 828 aa7.22□□□□□ -1.25
TCF4-213ENST00000562543 P2RX5Q93086 422 aa7.22□□□□□ -1.25
TCF4-213ENST00000562543 NECTIN4Q96NY8 510 aa7.22□□□□□ -1.25
TCF4-213ENST00000562543 DHX36Q9H2U1 1008 aaKnown RBP7.22□□□□□ -1.25
TCF4-213ENST00000562543 RC3H2Q9HBD1 1191 aaKnown RBP7.22□□□□□ -1.25
TCF4-213ENST00000562543 WNT16Q9UBV4 365 aa7.22□□□□□ -1.25
TCF4-213ENST00000562543 Q9Y3F1 56 aa7.22□□□□□ -1.25
TCF4-213ENST00000562543 SIT1Q9Y3P8 196 aa7.22□□□□□ -1.25
TCF4-213ENST00000562543 NEUROG3Q9Y4Z2 214 aa7.22□□□□□ -1.25
TCF4-213ENST00000562543 CREBBPQ92793 2442 aa7.22□□□□□ -1.25
TCF4-213ENST00000562543 CACNA1FO60840 1977 aa7.22□□□□□ -1.25
TCF4-213ENST00000562543 ZFHX3Q15911 3703 aa7.22□□□□□ -1.25
TCF4-213ENST00000562543 ENO4A6NNW6 628 aa7.21□□□□□ -1.26
TCF4-213ENST00000562543 PER2O15055 1255 aa7.21□□□□□ -1.26
TCF4-213ENST00000562543 WDR46O15213 610 aaKnown RBP7.21□□□□□ -1.26
TCF4-213ENST00000562543 ITGB1P05556 798 aa7.21□□□□□ -1.26
TCF4-213ENST00000562543 CKBP12277 381 aa7.21□□□□□ -1.26
TCF4-213ENST00000562543 ACPPP15309 386 aa7.21□□□□□ -1.26
TCF4-213ENST00000562543 CSTF1Q05048 431 aaKnown RBP7.21□□□□□ -1.26
TCF4-213ENST00000562543 DUSP6Q16828 381 aa7.21□□□□□ -1.26
TCF4-213ENST00000562543 RNF43Q68DV7 783 aa7.21□□□□□ -1.26
TCF4-213ENST00000562543 DZIP1Q86YF9 867 aaKnown RBP7.21□□□□□ -1.26
TCF4-213ENST00000562543 CCDC144CPQ8IYA2 1237 aa7.21□□□□□ -1.26
TCF4-213ENST00000562543 SPPL3Q8TCT6 385 aa7.21□□□□□ -1.26
TCF4-213ENST00000562543 LRIG1Q96JA1 1093 aa7.21□□□□□ -1.26
TCF4-213ENST00000562543 MYRFLQ96LU7 910 aa7.21□□□□□ -1.26
TCF4-213ENST00000562543 CDCA3Q99618 268 aaPredicted RBP7.21□□□□□ -1.26
TCF4-213ENST00000562543 APOL5Q9BWW9 433 aa7.21□□□□□ -1.26
TCF4-213ENST00000562543 CEP41Q9BYV8 373 aa7.21□□□□□ -1.26
TCF4-213ENST00000562543 MYH16Q9H6N6 1097 aa7.21□□□□□ -1.26
TCF4-213ENST00000562543 TLE6Q9H808 572 aa7.21□□□□□ -1.26
TCF4-213ENST00000562543 ZNF214Q9UL59 606 aaPredicted RBP7.21□□□□□ -1.26
TCF4-213ENST00000562543 ADAMTS5Q9UNA0 930 aa7.21□□□□□ -1.26
TCF4-213ENST00000562543 ADGRA3Q8IWK6 1321 aa7.21□□□□□ -1.26
TCF4-213ENST00000562543 DOPEY2Q9Y3R5 2298 aa7.2□□□□□ -1.26
TCF4-213ENST00000562543 APC2O95996 2303 aa7.2□□□□□ -1.26
TCF4-213ENST00000562543 GIPC1O14908 333 aa7.2□□□□□ -1.26
TCF4-213ENST00000562543 LAMTOR5O43504 91 aa7.2□□□□□ -1.26
TCF4-213ENST00000562543 NARSO43776 548 aaKnown RBP7.2□□□□□ -1.26
TCF4-213ENST00000562543 FLOT1O75955 427 aa7.2□□□□□ -1.26
TCF4-213ENST00000562543 STAT3P40763 770 aa7.2□□□□□ -1.26
TCF4-213ENST00000562543 TECP42680 631 aa7.2□□□□□ -1.26
TCF4-213ENST00000562543 LPAL2Q16609 132 aa7.2□□□□□ -1.26
TCF4-213ENST00000562543 PTGISQ16647 500 aa7.2□□□□□ -1.26
TCF4-213ENST00000562543 METTL24Q5JXM2 366 aa7.2□□□□□ -1.26
TCF4-213ENST00000562543 SNRNP48Q6IEG0 339 aaKnown RBP7.2□□□□□ -1.26
TCF4-213ENST00000562543 FOXP4Q8IVH2 680 aaPredicted RBP7.2□□□□□ -1.26
TCF4-213ENST00000562543 CACTIN-AS1Q8N1I8 211 aa7.2□□□□□ -1.26
TCF4-213ENST00000562543 CEP120Q8N960 986 aa7.2□□□□□ -1.26
TCF4-213ENST00000562543 DBF4BQ8NFT6 615 aa7.2□□□□□ -1.26
TCF4-213ENST00000562543 PJA1Q8NG27 643 aa7.2□□□□□ -1.26
TCF4-213ENST00000562543 ZNF384Q8TF68 577 aa7.2□□□□□ -1.26
TCF4-213ENST00000562543 POF1BQ8WVV4 589 aa7.2□□□□□ -1.26
TCF4-213ENST00000562543 IL17RAQ96F46 866 aa7.2□□□□□ -1.26
TCF4-213ENST00000562543 MTG1Q9BT17 334 aaPredicted RBP7.2□□□□□ -1.26
TCF4-213ENST00000562543 KCNF1Q9H3M0 494 aa7.2□□□□□ -1.26
TCF4-213ENST00000562543 KANSL3Q9P2N6 904 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms