RNA–Protein interactions for RNA: ENST00000562477.1

TMEM249-202, Transcript of transmembrane protein 249, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TMEM249, Length 725 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM249-202ENST00000562477 FAM102BQ5T8I3 360 aa21.54■■□□□ 1.04
TMEM249-202ENST00000562477 IGSF22Q8N9C0 903 aa21.54■■□□□ 1.04
TMEM249-202ENST00000562477 GPRC5CQ9NQ84 441 aa21.54■■□□□ 1.04
TMEM249-202ENST00000562477 GTPBP6O43824 516 aaPredicted RBP21.53■■□□□ 1.04
TMEM249-202ENST00000562477 GAS2O43903 313 aaKnown RBP21.53■■□□□ 1.04
TMEM249-202ENST00000562477 DGAT1O75907 488 aa21.53■■□□□ 1.04
TMEM249-202ENST00000562477 XRCC6P12956 609 aaKnown RBP eCLIP21.53■■□□□ 1.04
TMEM249-202ENST00000562477 ZSCAN20P17040 1043 aaPredicted RBP21.53■■□□□ 1.04
TMEM249-202ENST00000562477 CTNNB1P35222 781 aa21.53■■□□□ 1.04
TMEM249-202ENST00000562477 MAEAQ7L5Y9 396 aa21.53■■□□□ 1.04
TMEM249-202ENST00000562477 CATSPER4Q7RTX7 472 aa21.53■■□□□ 1.04
TMEM249-202ENST00000562477 CMTR2Q8IYT2 770 aaKnown RBP21.53■■□□□ 1.04
TMEM249-202ENST00000562477 RNF149Q8NC42 400 aa21.53■■□□□ 1.04
TMEM249-202ENST00000562477 TCP11Q8WWU5 503 aa21.53■■□□□ 1.04
TMEM249-202ENST00000562477 NACC1Q96RE7 527 aa21.53■■□□□ 1.04
TMEM249-202ENST00000562477 RNF19AQ9NV58 838 aa21.53■■□□□ 1.04
TMEM249-202ENST00000562477 HCSTQ9UBK5 93 aa21.53■■□□□ 1.04
TMEM249-202ENST00000562477 TBKBP1A7MCY6 615 aa21.52■■□□□ 1.04
TMEM249-202ENST00000562477 LAD1O00515 517 aa21.52■■□□□ 1.04
TMEM249-202ENST00000562477 POU3F3P20264 500 aaPredicted RBP21.52■■□□□ 1.04
TMEM249-202ENST00000562477 SYT1P21579 422 aa21.52■■□□□ 1.04
TMEM249-202ENST00000562477 SFPQP23246 707 aaKnown RBP eCLIP21.52■■□□□ 1.04
TMEM249-202ENST00000562477 ARL2P36404 184 aa21.52■■□□□ 1.04
TMEM249-202ENST00000562477 PRPHP41219 470 aa21.52■■□□□ 1.04
TMEM249-202ENST00000562477 PDIA5Q14554 519 aa21.52■■□□□ 1.04
TMEM249-202ENST00000562477 HAUS3Q68CZ6 603 aa21.52■■□□□ 1.04
TMEM249-202ENST00000562477 DTHD1Q6ZMT9 781 aa21.52■■□□□ 1.04
TMEM249-202ENST00000562477 ECHDC2Q86YB7 292 aa21.52■■□□□ 1.04
TMEM249-202ENST00000562477 RNF169Q8NCN4 708 aa21.52■■□□□ 1.04
TMEM249-202ENST00000562477 SNX29Q8TEQ0 813 aa21.52■■□□□ 1.04
TMEM249-202ENST00000562477 SNX21Q969T3 373 aa21.52■■□□□ 1.04
TMEM249-202ENST00000562477 INTS4Q96HW7 963 aaKnown RBP21.52■■□□□ 1.04
TMEM249-202ENST00000562477 MMTAG2Q9BU76 263 aaKnown RBP21.52■■□□□ 1.04
TMEM249-202ENST00000562477 POLR3FQ9H1D9 316 aaPredicted RBP21.52■■□□□ 1.04
TMEM249-202ENST00000562477 DBR1Q9UK59 544 aaKnown RBP21.52■■□□□ 1.04
TMEM249-202ENST00000562477 PIN4Q9Y237 131 aaKnown RBP21.52■■□□□ 1.04
TMEM249-202ENST00000562477 SPTBN5Q9NRC6 3674 aaKnown RBP21.51■■□□□ 1.03
TMEM249-202ENST00000562477 ATF7P17544 494 aaPredicted RBP21.51■■□□□ 1.03
TMEM249-202ENST00000562477 GLRA2P23416 452 aa21.51■■□□□ 1.03
TMEM249-202ENST00000562477 CAPSQ13938 189 aa21.51■■□□□ 1.03
TMEM249-202ENST00000562477 PHF6Q8IWS0 365 aaKnown RBP eCLIP21.51■■□□□ 1.03
TMEM249-202ENST00000562477 CLP1Q92989 425 aaKnown RBP21.51■■□□□ 1.03
TMEM249-202ENST00000562477 SAMD11Q96NU1 681 aa21.51■■□□□ 1.03
TMEM249-202ENST00000562477 INO80BQ9C086 356 aaPredicted RBP21.51■■□□□ 1.03
TMEM249-202ENST00000562477 DDX19AQ9NUU7 478 aaKnown RBP21.51■■□□□ 1.03
TMEM249-202ENST00000562477 TMEM161AQ9NX61 479 aa21.51■■□□□ 1.03
TMEM249-202ENST00000562477 KIAA1024Q9UPX6 916 aa21.51■■□□□ 1.03
TMEM249-202ENST00000562477 BRWD1Q9NSI6 2320 aa21.51■■□□□ 1.03
TMEM249-202ENST00000562477 ARHGEF35A5YM69 484 aa21.5■■□□□ 1.03
TMEM249-202ENST00000562477 ASAP2O43150 1006 aa21.5■■□□□ 1.03
TMEM249-202ENST00000562477 PDCP20941 246 aa21.5■■□□□ 1.03
TMEM249-202ENST00000562477 BMPR1AP36894 532 aa21.5■■□□□ 1.03
TMEM249-202ENST00000562477 GPM6BQ13491 265 aa21.5■■□□□ 1.03
TMEM249-202ENST00000562477 PADI6Q6TGC4 694 aa21.5■■□□□ 1.03
TMEM249-202ENST00000562477 FAM43BQ6ZT52 329 aaPredicted RBP21.5■■□□□ 1.03
TMEM249-202ENST00000562477 BRAPQ7Z569 592 aa21.5■■□□□ 1.03
TMEM249-202ENST00000562477 SRGAP1Q7Z6B7 1085 aa21.5■■□□□ 1.03
TMEM249-202ENST00000562477 ELAC1Q9H777 363 aaKnown RBP21.5■■□□□ 1.03
TMEM249-202ENST00000562477 POLD4Q9HCU8 107 aa21.5■■□□□ 1.03
TMEM249-202ENST00000562477 VWA3AA6NCI4 1184 aa21.49■■□□□ 1.03
TMEM249-202ENST00000562477 H3BNC9 293 aa21.49■■□□□ 1.03
TMEM249-202ENST00000562477 PTENP60484 403 aa21.49■■□□□ 1.03
TMEM249-202ENST00000562477 RESTQ13127 1097 aa21.49■■□□□ 1.03
TMEM249-202ENST00000562477 MXD4Q14582 209 aaPredicted RBP21.49■■□□□ 1.03
TMEM249-202ENST00000562477 LONRF3Q496Y0 759 aa21.49■■□□□ 1.03
TMEM249-202ENST00000562477 TWF2Q6IBS0 349 aaKnown RBP21.49■■□□□ 1.03
TMEM249-202ENST00000562477 FAM173BQ6P4H8 233 aa21.49■■□□□ 1.03
TMEM249-202ENST00000562477 ZNF598Q86UK7 904 aaKnown RBP21.49■■□□□ 1.03
TMEM249-202ENST00000562477 RAB34Q9BZG1 259 aa21.49■■□□□ 1.03
TMEM249-202ENST00000562477 MTMR6Q9Y217 621 aa21.49■■□□□ 1.03
TMEM249-202ENST00000562477 NLRC5Q86WI3 1866 aa21.49■■□□□ 1.03
TMEM249-202ENST00000562477 A0A0U1RQF3 1178 aa21.48■■□□□ 1.03
TMEM249-202ENST00000562477 MUTP22033 750 aa21.48■■□□□ 1.03
TMEM249-202ENST00000562477 HOXA11P31270 313 aaPredicted RBP21.48■■□□□ 1.03
TMEM249-202ENST00000562477 PHKA2P46019 1235 aa21.48■■□□□ 1.03
TMEM249-202ENST00000562477 CLLU1OSQ5K130 101 aa21.48■■□□□ 1.03
TMEM249-202ENST00000562477 KRT79Q5XKE5 535 aa21.48■■□□□ 1.03
TMEM249-202ENST00000562477 KCNK18Q7Z418 384 aa21.48■■□□□ 1.03
TMEM249-202ENST00000562477 BSNDQ8WZ55 320 aa21.48■■□□□ 1.03
TMEM249-202ENST00000562477 CASD1Q96PB1 797 aa21.48■■□□□ 1.03
TMEM249-202ENST00000562477 BHMT2Q9H2M3 363 aa21.48■■□□□ 1.03
TMEM249-202ENST00000562477 CHST12Q9NRB3 414 aa21.48■■□□□ 1.03
TMEM249-202ENST00000562477 AGPAT5Q9NUQ2 364 aa21.48■■□□□ 1.03
TMEM249-202ENST00000562477 DACT1Q9NYF0 836 aa21.48■■□□□ 1.03
TMEM249-202ENST00000562477 E9PMD0 336 aa21.47■■□□□ 1.03
TMEM249-202ENST00000562477 C5orf67F2Z3F1 127 aa21.47■■□□□ 1.03
TMEM249-202ENST00000562477 GRM6O15303 877 aa21.47■■□□□ 1.03
TMEM249-202ENST00000562477 CSPG5O95196 566 aa21.47■■□□□ 1.03
TMEM249-202ENST00000562477 CYP11B2P19099 503 aa21.47■■□□□ 1.03
TMEM249-202ENST00000562477 GRIN1Q05586 938 aa21.47■■□□□ 1.03
TMEM249-202ENST00000562477 ZRSR1Q15695 479 aaKnown RBP21.47■■□□□ 1.03
TMEM249-202ENST00000562477 HSCBQ8IWL3 235 aa21.47■■□□□ 1.03
TMEM249-202ENST00000562477 MCPH1Q8NEM0 835 aa21.47■■□□□ 1.03
TMEM249-202ENST00000562477 LPPQ93052 612 aa21.47■■□□□ 1.03
TMEM249-202ENST00000562477 PLIN2Q99541 437 aa21.47■■□□□ 1.03
TMEM249-202ENST00000562477 TYW1Q9NV66 732 aaKnown RBP21.47■■□□□ 1.03
TMEM249-202ENST00000562477 FNDC1Q4ZHG4 1894 aaPredicted RBP21.47■■□□□ 1.03
TMEM249-202ENST00000562477 VCANP13611 3396 aa21.47■■□□□ 1.03
TMEM249-202ENST00000562477 MEIS3P2A8K0S8 358 aa21.46■■□□□ 1.03
TMEM249-202ENST00000562477 INO80B-WBP1J3KQ70 363 aa21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms