RNA–Protein interactions for RNA: ENST00000560620.1

CTDSPL2-209, Transcript of CTD small phosphatase like 2, humanhuman

TSL 3

Gene CTDSPL2, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-209ENST00000560620 ARHGEF35A5YM69 484 aa14.43□□□□□ -0.1
CTDSPL2-209ENST00000560620 TBKBP1A7MCY6 615 aa14.43□□□□□ -0.1
CTDSPL2-209ENST00000560620 ASAP2O43150 1006 aa14.43□□□□□ -0.1
CTDSPL2-209ENST00000560620 FGFR1P11362 822 aa14.43□□□□□ -0.1
CTDSPL2-209ENST00000560620 XRCC6P12956 609 aaKnown RBP eCLIP14.43□□□□□ -0.1
CTDSPL2-209ENST00000560620 PHKA2P46019 1235 aa14.43□□□□□ -0.1
CTDSPL2-209ENST00000560620 GATMP50440 423 aa14.43□□□□□ -0.1
CTDSPL2-209ENST00000560620 GPM6BQ13491 265 aa14.43□□□□□ -0.1
CTDSPL2-209ENST00000560620 TFDP1Q14186 410 aa14.43□□□□□ -0.1
CTDSPL2-209ENST00000560620 PDIA5Q14554 519 aa14.43□□□□□ -0.1
CTDSPL2-209ENST00000560620 MXD4Q14582 209 aaPredicted RBP14.43□□□□□ -0.1
CTDSPL2-209ENST00000560620 ZRSR1Q15695 479 aaKnown RBP14.43□□□□□ -0.1
CTDSPL2-209ENST00000560620 KRT79Q5XKE5 535 aa14.43□□□□□ -0.1
CTDSPL2-209ENST00000560620 TWF2Q6IBS0 349 aaKnown RBP14.43□□□□□ -0.1
CTDSPL2-209ENST00000560620 FERMT3Q86UX7 667 aa14.43□□□□□ -0.1
CTDSPL2-209ENST00000560620 CMTR2Q8IYT2 770 aaKnown RBP14.43□□□□□ -0.1
CTDSPL2-209ENST00000560620 ZNF689Q96CS4 500 aaPredicted RBP14.43□□□□□ -0.1
CTDSPL2-209ENST00000560620 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.43□□□□□ -0.1
CTDSPL2-209ENST00000560620 TMEM161AQ9NX61 479 aa14.43□□□□□ -0.1
CTDSPL2-209ENST00000560620 STK24Q9Y6E0 443 aa14.43□□□□□ -0.1
CTDSPL2-209ENST00000560620 NLRC5Q86WI3 1866 aa14.43□□□□□ -0.1
CTDSPL2-209ENST00000560620 ERLIN2O94905 339 aa14.42□□□□□ -0.1
CTDSPL2-209ENST00000560620 CSPG5O95196 566 aa14.42□□□□□ -0.1
CTDSPL2-209ENST00000560620 PRPHP41219 470 aa14.42□□□□□ -0.1
CTDSPL2-209ENST00000560620 NCBP1Q09161 790 aaKnown RBP14.42□□□□□ -0.1
CTDSPL2-209ENST00000560620 DSC3Q14574 896 aa14.42□□□□□ -0.1
CTDSPL2-209ENST00000560620 PTPROQ16827 1216 aa14.42□□□□□ -0.1
CTDSPL2-209ENST00000560620 FAM102BQ5T8I3 360 aa14.42□□□□□ -0.1
CTDSPL2-209ENST00000560620 BRAPQ7Z569 592 aa14.42□□□□□ -0.1
CTDSPL2-209ENST00000560620 SRGAP1Q7Z6B7 1085 aa14.42□□□□□ -0.1
CTDSPL2-209ENST00000560620 HSCBQ8IWL3 235 aa14.42□□□□□ -0.1
CTDSPL2-209ENST00000560620 C11orf84Q9BUA3 381 aaPredicted RBP14.42□□□□□ -0.1
CTDSPL2-209ENST00000560620 IFT122Q9HBG6 1241 aa14.42□□□□□ -0.1
CTDSPL2-209ENST00000560620 XPNPEP1Q9NQW7 623 aa14.42□□□□□ -0.1
CTDSPL2-209ENST00000560620 DDX19AQ9NUU7 478 aaKnown RBP14.42□□□□□ -0.1
CTDSPL2-209ENST00000560620 KIAA1024Q9UPX6 916 aa14.42□□□□□ -0.1
CTDSPL2-209ENST00000560620 MRPL42Q9Y6G3 142 aaKnown RBP14.42□□□□□ -0.1
CTDSPL2-209ENST00000560620 VWA3AA6NCI4 1184 aa14.41□□□□□ -0.1
CTDSPL2-209ENST00000560620 PP2D1A8MPX8 630 aa14.41□□□□□ -0.1
CTDSPL2-209ENST00000560620 INO80B-WBP1J3KQ70 363 aa14.41□□□□□ -0.1
CTDSPL2-209ENST00000560620 HOXA2O43364 376 aa14.41□□□□□ -0.1
CTDSPL2-209ENST00000560620 LPXNO60711 386 aa14.41□□□□□ -0.1
CTDSPL2-209ENST00000560620 CDC25AP30304 524 aa14.41□□□□□ -0.1
CTDSPL2-209ENST00000560620 BMPR1AP36894 532 aa14.41□□□□□ -0.1
CTDSPL2-209ENST00000560620 LONRF3Q496Y0 759 aa14.41□□□□□ -0.1
CTDSPL2-209ENST00000560620 ECHDC2Q86YB7 292 aa14.41□□□□□ -0.1
CTDSPL2-209ENST00000560620 CRIPAKQ8N1N5 446 aa14.41□□□□□ -0.1
CTDSPL2-209ENST00000560620 IGSF22Q8N9C0 903 aa14.41□□□□□ -0.1
CTDSPL2-209ENST00000560620 MCPH1Q8NEM0 835 aa14.41□□□□□ -0.1
CTDSPL2-209ENST00000560620 INTS4Q96HW7 963 aaKnown RBP14.41□□□□□ -0.1
CTDSPL2-209ENST00000560620 POLR3FQ9H1D9 316 aaPredicted RBP14.41□□□□□ -0.1
CTDSPL2-209ENST00000560620 ELAC1Q9H777 363 aaKnown RBP14.41□□□□□ -0.1
CTDSPL2-209ENST00000560620 RC3H2Q9HBD1 1191 aaKnown RBP14.41□□□□□ -0.1
CTDSPL2-209ENST00000560620 PRDM6Q9NQX0 595 aa14.41□□□□□ -0.1
CTDSPL2-209ENST00000560620 CHST12Q9NRB3 414 aa14.41□□□□□ -0.1
CTDSPL2-209ENST00000560620 DBR1Q9UK59 544 aaKnown RBP14.41□□□□□ -0.1
CTDSPL2-209ENST00000560620 PRUNE2Q8WUY3 3088 aa14.41□□□□□ -0.1
CTDSPL2-209ENST00000560620 RALGAPA2Q2PPJ7 1873 aa14.4□□□□□ -0.1
CTDSPL2-209ENST00000560620 COL4A6Q14031 1691 aa14.4□□□□□ -0.1
CTDSPL2-209ENST00000560620 A0A0U1RQF3 1178 aa14.4□□□□□ -0.1
CTDSPL2-209ENST00000560620 LRRIQ4A6NIV6 560 aa14.4□□□□□ -0.1
CTDSPL2-209ENST00000560620 H3BNC9 293 aa14.4□□□□□ -0.1
CTDSPL2-209ENST00000560620 SKIP12755 728 aa14.4□□□□□ -0.1
CTDSPL2-209ENST00000560620 POU3F3P20264 500 aaPredicted RBP14.4□□□□□ -0.1
CTDSPL2-209ENST00000560620 SYT1P21579 422 aa14.4□□□□□ -0.1
CTDSPL2-209ENST00000560620 MUTP22033 750 aa14.4□□□□□ -0.1
CTDSPL2-209ENST00000560620 FAM189BP81408 668 aa14.4□□□□□ -0.1
CTDSPL2-209ENST00000560620 ATP2C1P98194 919 aaPredicted RBP14.4□□□□□ -0.1
CTDSPL2-209ENST00000560620 PADI6Q6TGC4 694 aa14.4□□□□□ -0.1
CTDSPL2-209ENST00000560620 ASAP3Q8TDY4 903 aa14.4□□□□□ -0.1
CTDSPL2-209ENST00000560620 CLP1Q92989 425 aaKnown RBP14.4□□□□□ -0.1
CTDSPL2-209ENST00000560620 CDK5RAP3Q96JB5 506 aa14.4□□□□□ -0.1
CTDSPL2-209ENST00000560620 BHMT2Q9H2M3 363 aa14.4□□□□□ -0.1
CTDSPL2-209ENST00000560620 MINDY3Q9H8M7 445 aa14.4□□□□□ -0.1
CTDSPL2-209ENST00000560620 GPRC5CQ9NQ84 441 aa14.4□□□□□ -0.1
CTDSPL2-209ENST00000560620 AAASQ9NRG9 546 aa14.4□□□□□ -0.1
CTDSPL2-209ENST00000560620 LMCD1Q9NZU5 365 aa14.4□□□□□ -0.1
CTDSPL2-209ENST00000560620 DNM3Q9UQ16 869 aa14.4□□□□□ -0.1
CTDSPL2-209ENST00000560620 EOMESO95936 686 aa14.39□□□□□ -0.11
CTDSPL2-209ENST00000560620 RB1P06400 928 aa14.39□□□□□ -0.11
CTDSPL2-209ENST00000560620 ARL2P36404 184 aa14.39□□□□□ -0.11
CTDSPL2-209ENST00000560620 CAPSQ13938 189 aa14.39□□□□□ -0.11
CTDSPL2-209ENST00000560620 IL17AQ16552 155 aa14.39□□□□□ -0.11
CTDSPL2-209ENST00000560620 ECM1Q16610 540 aa14.39□□□□□ -0.11
CTDSPL2-209ENST00000560620 TMEM132AQ24JP5 1023 aa14.39□□□□□ -0.11
CTDSPL2-209ENST00000560620 HELQQ8TDG4 1101 aa14.39□□□□□ -0.11
CTDSPL2-209ENST00000560620 MRPL38Q96DV4 380 aaKnown RBP14.39□□□□□ -0.11
CTDSPL2-209ENST00000560620 PLVAPQ9BX97 442 aa14.39□□□□□ -0.11
CTDSPL2-209ENST00000560620 TMEM117Q9H0C3 514 aa14.39□□□□□ -0.11
CTDSPL2-209ENST00000560620 ALG13Q9NP73 1137 aaKnown RBP14.39□□□□□ -0.11
CTDSPL2-209ENST00000560620 AGPAT5Q9NUQ2 364 aa14.39□□□□□ -0.11
CTDSPL2-209ENST00000560620 THEGQ9P2T0 379 aa14.39□□□□□ -0.11
CTDSPL2-209ENST00000560620 PCDHB12Q9Y5F1 795 aa14.39□□□□□ -0.11
CTDSPL2-209ENST00000560620 TRANK1O15050 2925 aa14.39□□□□□ -0.11
CTDSPL2-209ENST00000560620 PRRC2BQ5JSZ5 2229 aaKnown RBP14.39□□□□□ -0.11
CTDSPL2-209ENST00000560620 E9PMD0 336 aa14.38□□□□□ -0.11
CTDSPL2-209ENST00000560620 C5orf67F2Z3F1 127 aa14.38□□□□□ -0.11
CTDSPL2-209ENST00000560620 BMP15O95972 392 aa14.38□□□□□ -0.11
CTDSPL2-209ENST00000560620 SSBP05455 408 aaKnown RBP eCLIP14.38□□□□□ -0.11
CTDSPL2-209ENST00000560620 LIG1P18858 919 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms