RNA–Protein interactions for RNA: ENST00000560549.5

TMOD3-207, Transcript of tropomodulin 3, humanhuman

TSL 1 (best)

Gene TMOD3, Length 1,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMOD3-207ENST00000560549 SLC52A2Q9HAB3 445 aa5.45□□□□□ -1.54
TMOD3-207ENST00000560549 NTMQ9P121 344 aa5.45□□□□□ -1.54
TMOD3-207ENST00000560549 ADGRB2O60241 1585 aa5.45□□□□□ -1.54
TMOD3-207ENST00000560549 AATKQ6ZMQ8 1374 aa5.45□□□□□ -1.54
TMOD3-207ENST00000560549 FANCIQ9NVI1 1328 aa5.45□□□□□ -1.54
TMOD3-207ENST00000560549 CCDC163A0A0D9SF12 145 aa5.45□□□□□ -1.54
TMOD3-207ENST00000560549 DNAJC6O75061 913 aa5.45□□□□□ -1.54
TMOD3-207ENST00000560549 DNAJC8O75937 253 aaPredicted RBP5.45□□□□□ -1.54
TMOD3-207ENST00000560549 IGHDP01880 384 aa5.45□□□□□ -1.54
TMOD3-207ENST00000560549 POU3F3P20264 500 aaPredicted RBP5.45□□□□□ -1.54
TMOD3-207ENST00000560549 RPL13P26373 211 aaKnown RBP5.45□□□□□ -1.54
TMOD3-207ENST00000560549 SARSP49591 514 aaKnown RBP5.45□□□□□ -1.54
TMOD3-207ENST00000560549 EXOSC9Q06265 439 aaKnown RBP5.45□□□□□ -1.54
TMOD3-207ENST00000560549 HSP90AB2PQ58FF8 381 aa5.45□□□□□ -1.54
TMOD3-207ENST00000560549 TMC5Q6UXY8 1006 aa5.45□□□□□ -1.54
TMOD3-207ENST00000560549 FGD2Q7Z6J4 655 aa5.45□□□□□ -1.54
TMOD3-207ENST00000560549 ZC3H18Q86VM9 953 aaKnown RBP5.45□□□□□ -1.54
TMOD3-207ENST00000560549 MRPL4Q9BYD3 311 aaKnown RBP5.45□□□□□ -1.54
TMOD3-207ENST00000560549 SPC25Q9HBM1 224 aa5.45□□□□□ -1.54
TMOD3-207ENST00000560549 PCDHA8Q9Y5H6 950 aa5.45□□□□□ -1.54
TMOD3-207ENST00000560549 PTCH1Q13635 1447 aa5.44□□□□□ -1.54
TMOD3-207ENST00000560549 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.44□□□□□ -1.54
TMOD3-207ENST00000560549 VIL1P09327 827 aaKnown RBP5.44□□□□□ -1.54
TMOD3-207ENST00000560549 ZNF28P17035 718 aa5.44□□□□□ -1.54
TMOD3-207ENST00000560549 USP6P35125 1406 aa5.44□□□□□ -1.54
TMOD3-207ENST00000560549 DCCP43146 1447 aa5.44□□□□□ -1.54
TMOD3-207ENST00000560549 MLLT6P55198 1093 aaPredicted RBP5.44□□□□□ -1.54
TMOD3-207ENST00000560549 NKX3-2P78367 333 aa5.44□□□□□ -1.54
TMOD3-207ENST00000560549 TUSC3Q13454 348 aa5.44□□□□□ -1.54
TMOD3-207ENST00000560549 EIF4A2Q14240 407 aaKnown RBP5.44□□□□□ -1.54
TMOD3-207ENST00000560549 FNDC3BQ53EP0 1204 aaKnown RBP5.44□□□□□ -1.54
TMOD3-207ENST00000560549 BRAPQ7Z569 592 aa5.44□□□□□ -1.54
TMOD3-207ENST00000560549 FERMT3Q86UX7 667 aa5.44□□□□□ -1.54
TMOD3-207ENST00000560549 THNSL2Q86YJ6 484 aa5.44□□□□□ -1.54
TMOD3-207ENST00000560549 NIM1KQ8IY84 436 aa5.44□□□□□ -1.54
TMOD3-207ENST00000560549 PHOSPHO1Q8TCT1 267 aa5.44□□□□□ -1.54
TMOD3-207ENST00000560549 ZCCHC14Q8WYQ9 949 aaKnown RBP5.44□□□□□ -1.54
TMOD3-207ENST00000560549 YIPF4Q9BSR8 244 aa5.44□□□□□ -1.54
TMOD3-207ENST00000560549 CD244Q9BZW8 370 aa5.44□□□□□ -1.54
TMOD3-207ENST00000560549 TMX1Q9H3N1 280 aa5.44□□□□□ -1.54
TMOD3-207ENST00000560549 DDX56Q9NY93 547 aaKnown RBP5.44□□□□□ -1.54
TMOD3-207ENST00000560549 ANKRD26Q9UPS8 1709 aa5.44□□□□□ -1.54
TMOD3-207ENST00000560549 PLAAQ9Y263 795 aa5.44□□□□□ -1.54
TMOD3-207ENST00000560549 PRKAB1Q9Y478 270 aa5.44□□□□□ -1.54
TMOD3-207ENST00000560549 MAPK8IP3Q9UPT6 1336 aa5.43□□□□□ -1.54
TMOD3-207ENST00000560549 NALCNQ8IZF0 1738 aa5.43□□□□□ -1.54
TMOD3-207ENST00000560549 OVOS2A0A0J9YW53 1432 aa5.43□□□□□ -1.54
TMOD3-207ENST00000560549 OVOS2Q6IE36 1432 aa5.43□□□□□ -1.54
TMOD3-207ENST00000560549 ADGRL3Q9HAR2 1447 aa5.43□□□□□ -1.54
TMOD3-207ENST00000560549 ACOT7O00154 380 aa5.43□□□□□ -1.54
TMOD3-207ENST00000560549 KRIT1O00522 736 aa5.43□□□□□ -1.54
TMOD3-207ENST00000560549 DDX3XO00571 662 aaKnown RBP eCLIP5.43□□□□□ -1.54
TMOD3-207ENST00000560549 AMY2AP04746 511 aa5.43□□□□□ -1.54
TMOD3-207ENST00000560549 GNAT1P11488 350 aa5.43□□□□□ -1.54
TMOD3-207ENST00000560549 COL6A1P12109 1028 aa5.43□□□□□ -1.54
TMOD3-207ENST00000560549 ATF3P18847 181 aa5.43□□□□□ -1.54
TMOD3-207ENST00000560549 AMY2BP19961 511 aa5.43□□□□□ -1.54
TMOD3-207ENST00000560549 MCTP2Q6DN12 878 aa5.43□□□□□ -1.54
TMOD3-207ENST00000560549 CYP4F22Q6NT55 531 aa5.43□□□□□ -1.54
TMOD3-207ENST00000560549 MAMDC2Q7Z304 686 aaPredicted RBP5.43□□□□□ -1.54
TMOD3-207ENST00000560549 SMC5Q8IY18 1101 aa5.43□□□□□ -1.54
TMOD3-207ENST00000560549 GOLGA6L2Q8N9W4 650 aaPredicted RBP5.43□□□□□ -1.54
TMOD3-207ENST00000560549 TTLL11Q8NHH1 800 aa5.43□□□□□ -1.54
TMOD3-207ENST00000560549 MORC4Q8TE76 937 aa5.43□□□□□ -1.54
TMOD3-207ENST00000560549 SSH1Q8WYL5 1049 aa5.43□□□□□ -1.54
TMOD3-207ENST00000560549 DDX1Q92499 740 aaKnown RBP5.43□□□□□ -1.54
TMOD3-207ENST00000560549 FRAT1Q92837 279 aaPredicted RBP5.43□□□□□ -1.54
TMOD3-207ENST00000560549 PTPRN2Q92932 1015 aa5.43□□□□□ -1.54
TMOD3-207ENST00000560549 CBLCQ9ULV8 474 aa5.43□□□□□ -1.54
TMOD3-207ENST00000560549 PCDHA9Q9Y5H5 950 aa5.43□□□□□ -1.54
TMOD3-207ENST00000560549 IL16Q14005 1332 aa5.42□□□□□ -1.54
TMOD3-207ENST00000560549 KIF20BQ96Q89 1820 aa5.42□□□□□ -1.54
TMOD3-207ENST00000560549 GSG1L2A8MUP6 293 aa5.42□□□□□ -1.54
TMOD3-207ENST00000560549 ARVCFO00192 962 aa5.42□□□□□ -1.54
TMOD3-207ENST00000560549 TCERG1O14776 1098 aaKnown RBP5.42□□□□□ -1.54
TMOD3-207ENST00000560549 WNT9AO14904 365 aa5.42□□□□□ -1.54
TMOD3-207ENST00000560549 PEX14O75381 377 aa5.42□□□□□ -1.54
TMOD3-207ENST00000560549 ZNF853P0CG23 659 aa5.42□□□□□ -1.54
TMOD3-207ENST00000560549 EPHA5P54756 1037 aa5.42□□□□□ -1.54
TMOD3-207ENST00000560549 AMPD3Q01432 767 aa5.42□□□□□ -1.54
TMOD3-207ENST00000560549 DCTN1Q14203 1278 aa5.42□□□□□ -1.54
TMOD3-207ENST00000560549 ZNF460Q14592 562 aa5.42□□□□□ -1.54
TMOD3-207ENST00000560549 FSTL4Q6MZW2 842 aa5.42□□□□□ -1.54
TMOD3-207ENST00000560549 TTLL7Q6ZT98 887 aa5.42□□□□□ -1.54
TMOD3-207ENST00000560549 TSPYL6Q8N831 410 aa5.42□□□□□ -1.54
TMOD3-207ENST00000560549 PCDH19Q8TAB3 1148 aa5.42□□□□□ -1.54
TMOD3-207ENST00000560549 MFSD3Q96ES6 412 aa5.42□□□□□ -1.54
TMOD3-207ENST00000560549 SLKQ9H2G2 1235 aaPredicted RBP5.42□□□□□ -1.54
TMOD3-207ENST00000560549 HSPBP1Q9NZL4 362 aa5.42□□□□□ -1.54
TMOD3-207ENST00000560549 NDOR1Q9UHB4 597 aa5.42□□□□□ -1.54
TMOD3-207ENST00000560549 SFMBT1Q9UHJ3 866 aa5.42□□□□□ -1.54
TMOD3-207ENST00000560549 MON2Q7Z3U7 1717 aa5.42□□□□□ -1.54
TMOD3-207ENST00000560549 CDK12Q9NYV4 1490 aaPredicted RBP5.42□□□□□ -1.54
TMOD3-207ENST00000560549 CEP350Q5VT06 3117 aa5.42□□□□□ -1.54
TMOD3-207ENST00000560549 TOPAZ1Q8N9V7 1692 aa5.42□□□□□ -1.54
TMOD3-207ENST00000560549 ROBO1Q9Y6N7 1651 aa5.42□□□□□ -1.54
TMOD3-207ENST00000560549 MAP3K19Q56UN5 1328 aa5.41□□□□□ -1.54
TMOD3-207ENST00000560549 FAM47E-STBD1D6RA91 191 aa5.41□□□□□ -1.54
TMOD3-207ENST00000560549 RASGRP1O95267 797 aa5.41□□□□□ -1.54
TMOD3-207ENST00000560549 CRTAMO95727 393 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms