RNA–Protein interactions for RNA: ENST00000560424.1

SMAD3-215, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-215ENST00000560424 DPP7Q9UHL4 492 aa10.53□□□□□ -0.72
SMAD3-215ENST00000560424 GMEB2Q9UKD1 530 aa10.53□□□□□ -0.72
SMAD3-215ENST00000560424 UBIAD1Q9Y5Z9 338 aa10.53□□□□□ -0.72
SMAD3-215ENST00000560424 IRAK3Q9Y616 596 aa10.53□□□□□ -0.72
SMAD3-215ENST00000560424 OTOGLQ3ZCN5 2332 aa10.52□□□□□ -0.72
SMAD3-215ENST00000560424 MEIS2O14770 477 aa10.52□□□□□ -0.73
SMAD3-215ENST00000560424 SLC27A2O14975 620 aa10.52□□□□□ -0.73
SMAD3-215ENST00000560424 VTNP04004 478 aa10.52□□□□□ -0.73
SMAD3-215ENST00000560424 PSMA5P28066 241 aa10.52□□□□□ -0.73
SMAD3-215ENST00000560424 KIF5BP33176 963 aa10.52□□□□□ -0.73
SMAD3-215ENST00000560424 RNASELQ05823 741 aaKnown RBP10.52□□□□□ -0.73
SMAD3-215ENST00000560424 WTAPQ15007 396 aa10.52□□□□□ -0.73
SMAD3-215ENST00000560424 SEC23AQ15436 765 aa10.52□□□□□ -0.73
SMAD3-215ENST00000560424 ZNF484Q5JVG2 852 aa10.52□□□□□ -0.73
SMAD3-215ENST00000560424 DCLRE1AQ6PJP8 1040 aa10.52□□□□□ -0.73
SMAD3-215ENST00000560424 CATIPQ7Z7H3 387 aa10.52□□□□□ -0.73
SMAD3-215ENST00000560424 DDX53Q86TM3 631 aaKnown RBP10.52□□□□□ -0.73
SMAD3-215ENST00000560424 HSCBQ8IWL3 235 aa10.52□□□□□ -0.73
SMAD3-215ENST00000560424 RASEFQ8IZ41 740 aa10.52□□□□□ -0.73
SMAD3-215ENST00000560424 CTCFLQ8NI51 663 aaPredicted RBP10.52□□□□□ -0.73
SMAD3-215ENST00000560424 SLC22A17Q8WUG5 538 aa10.52□□□□□ -0.73
SMAD3-215ENST00000560424 MAP7D2Q96T17 732 aa10.52□□□□□ -0.73
SMAD3-215ENST00000560424 ZSWIM6Q9HCJ5 1215 aa10.52□□□□□ -0.73
SMAD3-215ENST00000560424 DACT1Q9NYF0 836 aa10.52□□□□□ -0.73
SMAD3-215ENST00000560424 STK39Q9UEW8 545 aa10.52□□□□□ -0.73
SMAD3-215ENST00000560424 TCEAL9Q9UHQ7 104 aa10.52□□□□□ -0.73
SMAD3-215ENST00000560424 AKT3Q9Y243 479 aa10.52□□□□□ -0.73
SMAD3-215ENST00000560424 NFASCO94856 1347 aa10.52□□□□□ -0.73
SMAD3-215ENST00000560424 K7ELQ4 463 aaPredicted RBP10.51□□□□□ -0.73
SMAD3-215ENST00000560424 SSBP05455 408 aaKnown RBP eCLIP10.51□□□□□ -0.73
SMAD3-215ENST00000560424 KCNA4P22459 653 aa10.51□□□□□ -0.73
SMAD3-215ENST00000560424 TMOD1P28289 359 aa10.51□□□□□ -0.73
SMAD3-215ENST00000560424 CSTF1Q05048 431 aaKnown RBP10.51□□□□□ -0.73
SMAD3-215ENST00000560424 DSC3Q14574 896 aa10.51□□□□□ -0.73
SMAD3-215ENST00000560424 ZNF528Q3MIS6 628 aa10.51□□□□□ -0.73
SMAD3-215ENST00000560424 CLLU1OSQ5K130 101 aa10.51□□□□□ -0.73
SMAD3-215ENST00000560424 PDXDC2PQ6P474 469 aa10.51□□□□□ -0.73
SMAD3-215ENST00000560424 TRMT1LQ7Z2T5 733 aaKnown RBP10.51□□□□□ -0.73
SMAD3-215ENST00000560424 SLC44A3Q8N4M1 653 aa10.51□□□□□ -0.73
SMAD3-215ENST00000560424 PJA1Q8NG27 643 aa10.51□□□□□ -0.73
SMAD3-215ENST00000560424 RSPH1Q8WYR4 309 aa10.51□□□□□ -0.73
SMAD3-215ENST00000560424 PIDD1Q9HB75 910 aa10.51□□□□□ -0.73
SMAD3-215ENST00000560424 ZNF302Q9NR11 478 aa10.51□□□□□ -0.73
SMAD3-215ENST00000560424 KCNH7Q9NS40 1196 aa10.51□□□□□ -0.73
SMAD3-215ENST00000560424 RNF19AQ9NV58 838 aa10.51□□□□□ -0.73
SMAD3-215ENST00000560424 DAXXQ9UER7 740 aaPredicted RBP10.51□□□□□ -0.73
SMAD3-215ENST00000560424 SMG5Q9UPR3 1016 aaKnown RBP10.51□□□□□ -0.73
SMAD3-215ENST00000560424 PCDHGA2Q9Y5H1 932 aa10.51□□□□□ -0.73
SMAD3-215ENST00000560424 FANCMQ8IYD8 2048 aa10.51□□□□□ -0.73
SMAD3-215ENST00000560424 SPTBN2O15020 2390 aa10.51□□□□□ -0.73
SMAD3-215ENST00000560424 DDX39AO00148 427 aaKnown RBP10.5□□□□□ -0.73
SMAD3-215ENST00000560424 CYP21A2P08686 494 aa10.5□□□□□ -0.73
SMAD3-215ENST00000560424 HMGB1P09429 215 aaKnown RBP10.5□□□□□ -0.73
SMAD3-215ENST00000560424 CLCN4P51793 760 aa10.5□□□□□ -0.73
SMAD3-215ENST00000560424 COL9A2Q14055 689 aaPredicted RBP10.5□□□□□ -0.73
SMAD3-215ENST00000560424 UBE2SQ16763 222 aa10.5□□□□□ -0.73
SMAD3-215ENST00000560424 SLC35G1Q2M3R5 365 aa10.5□□□□□ -0.73
SMAD3-215ENST00000560424 PPM1JQ5JR12 505 aa10.5□□□□□ -0.73
SMAD3-215ENST00000560424 MIS18BP1Q6P0N0 1132 aa10.5□□□□□ -0.73
SMAD3-215ENST00000560424 CYB5R4Q7L1T6 521 aa10.5□□□□□ -0.73
SMAD3-215ENST00000560424 RALYLQ86SE5 291 aaKnown RBP10.5□□□□□ -0.73
SMAD3-215ENST00000560424 FBXL16Q8N461 479 aa10.5□□□□□ -0.73
SMAD3-215ENST00000560424 IGSF21Q96ID5 467 aa10.5□□□□□ -0.73
SMAD3-215ENST00000560424 MXRA8Q9BRK3 442 aa10.5□□□□□ -0.73
SMAD3-215ENST00000560424 FOXQ1Q9C009 403 aa10.5□□□□□ -0.73
SMAD3-215ENST00000560424 GBP3Q9H0R5 595 aa10.5□□□□□ -0.73
SMAD3-215ENST00000560424 WDR6Q9NNW5 1121 aaKnown RBP10.5□□□□□ -0.73
SMAD3-215ENST00000560424 MAN1C1Q9NR34 630 aa10.5□□□□□ -0.73
SMAD3-215ENST00000560424 MRPL17Q9NRX2 175 aaKnown RBP10.5□□□□□ -0.73
SMAD3-215ENST00000560424 DLGAP2Q9P1A6 1054 aa10.5□□□□□ -0.73
SMAD3-215ENST00000560424 EPS15L1Q9UBC2 864 aa10.5□□□□□ -0.73
SMAD3-215ENST00000560424 FBXO4Q9UKT5 387 aa10.5□□□□□ -0.73
SMAD3-215ENST00000560424 RAB23Q9ULC3 237 aa10.5□□□□□ -0.73
SMAD3-215ENST00000560424 PCDHA6Q9UN73 950 aa10.5□□□□□ -0.73
SMAD3-215ENST00000560424 CEP131Q9UPN4 1083 aa10.5□□□□□ -0.73
SMAD3-215ENST00000560424 PCDHA8Q9Y5H6 950 aa10.5□□□□□ -0.73
SMAD3-215ENST00000560424 CLUHO75153 1309 aa10.5□□□□□ -0.73
SMAD3-215ENST00000560424 EVPLQ92817 2033 aa10.5□□□□□ -0.73
SMAD3-215ENST00000560424 MAP1BP46821 2468 aaKnown RBP10.49□□□□□ -0.73
SMAD3-215ENST00000560424 C2orf16Q68DN1 1984 aa10.49□□□□□ -0.73
SMAD3-215ENST00000560424 A0A0U1RQF3 1178 aa10.49□□□□□ -0.73
SMAD3-215ENST00000560424 CCDC195A0A1B0GUA6 201 aa10.49□□□□□ -0.73
SMAD3-215ENST00000560424 POTEMA6NI47 508 aa10.49□□□□□ -0.73
SMAD3-215ENST00000560424 INPPL1O15357 1258 aa10.49□□□□□ -0.73
SMAD3-215ENST00000560424 GPR32O75388 356 aa10.49□□□□□ -0.73
SMAD3-215ENST00000560424 EIF4BP23588 611 aaKnown RBP10.49□□□□□ -0.73
SMAD3-215ENST00000560424 NEK4P51957 841 aa10.49□□□□□ -0.73
SMAD3-215ENST00000560424 NLRP11P59045 1033 aaKnown RBP10.49□□□□□ -0.73
SMAD3-215ENST00000560424 TROAPQ12815 778 aa10.49□□□□□ -0.73
SMAD3-215ENST00000560424 UBXN2BQ14CS0 331 aa10.49□□□□□ -0.73
SMAD3-215ENST00000560424 POTEGQ6S5H5 508 aa10.49□□□□□ -0.73
SMAD3-215ENST00000560424 GLB1LQ6UWU2 654 aa10.49□□□□□ -0.73
SMAD3-215ENST00000560424 CYP26C1Q6V0L0 522 aa10.49□□□□□ -0.73
SMAD3-215ENST00000560424 RUFY3Q7L099 469 aa10.49□□□□□ -0.73
SMAD3-215ENST00000560424 ZNF710Q8N1W2 664 aa10.49□□□□□ -0.73
SMAD3-215ENST00000560424 CMASQ8NFW8 434 aaPredicted RBP10.49□□□□□ -0.73
SMAD3-215ENST00000560424 PHKBQ93100 1093 aa10.49□□□□□ -0.73
SMAD3-215ENST00000560424 KLHL5Q96PQ7 755 aa10.49□□□□□ -0.73
SMAD3-215ENST00000560424 FAM193BQ96PV7 902 aaPredicted RBP10.49□□□□□ -0.73
SMAD3-215ENST00000560424 SPZ1Q9BXG8 430 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms