RNA–Protein interactions for RNA: ENST00000559790.1

CDC42BPB-206, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 713 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-206ENST00000559790 THNSL1Q8IYQ7 743 aa21.13■□□□□ 0.97
CDC42BPB-206ENST00000559790 LRRC43Q8N309 656 aa21.13■□□□□ 0.97
CDC42BPB-206ENST00000559790 MRPS27Q92552 414 aaKnown RBP21.13■□□□□ 0.97
CDC42BPB-206ENST00000559790 MUTYHQ9UIF7 546 aa21.13■□□□□ 0.97
CDC42BPB-206ENST00000559790 A0A087WZ62 844 aa21.12■□□□□ 0.97
CDC42BPB-206ENST00000559790 HIDE1A8MVS5 230 aa21.12■□□□□ 0.97
CDC42BPB-206ENST00000559790 LOC730098B7Z3J9 87 aa21.12■□□□□ 0.97
CDC42BPB-206ENST00000559790 MAFO75444 373 aaPredicted RBP21.12■□□□□ 0.97
CDC42BPB-206ENST00000559790 ALADP13716 330 aa21.12■□□□□ 0.97
CDC42BPB-206ENST00000559790 FDPSP14324 419 aaKnown RBP21.12■□□□□ 0.97
CDC42BPB-206ENST00000559790 HOXD11P31277 338 aaPredicted RBP21.12■□□□□ 0.97
CDC42BPB-206ENST00000559790 CBX2Q14781 532 aaPredicted RBP21.12■□□□□ 0.97
CDC42BPB-206ENST00000559790 RNF135Q8IUD6 432 aa21.12■□□□□ 0.97
CDC42BPB-206ENST00000559790 KSR1Q8IVT5 923 aa21.12■□□□□ 0.97
CDC42BPB-206ENST00000559790 SLC39A11Q8N1S5 342 aa21.12■□□□□ 0.97
CDC42BPB-206ENST00000559790 ZNF710Q8N1W2 664 aa21.12■□□□□ 0.97
CDC42BPB-206ENST00000559790 HELQQ8TDG4 1101 aa21.12■□□□□ 0.97
CDC42BPB-206ENST00000559790 FDXACB1Q9BRP7 624 aaPredicted RBP21.12■□□□□ 0.97
CDC42BPB-206ENST00000559790 TRAIPQ9BWF2 469 aa21.12■□□□□ 0.97
CDC42BPB-206ENST00000559790 WNT7AO00755 349 aa21.11■□□□□ 0.97
CDC42BPB-206ENST00000559790 NPEPPSP55786 919 aa21.11■□□□□ 0.97
CDC42BPB-206ENST00000559790 ST3GAL1Q11201 340 aa21.11■□□□□ 0.97
CDC42BPB-206ENST00000559790 CSPP1Q1MSJ5 1256 aa21.11■□□□□ 0.97
CDC42BPB-206ENST00000559790 SPOUT1Q5T280 376 aaKnown RBP21.11■□□□□ 0.97
CDC42BPB-206ENST00000559790 PLPP4Q5VZY2 271 aa21.11■□□□□ 0.97
CDC42BPB-206ENST00000559790 TMEM184AQ6ZMB5 413 aa21.11■□□□□ 0.97
CDC42BPB-206ENST00000559790 BCL7CQ8WUZ0 217 aaPredicted RBP21.11■□□□□ 0.97
CDC42BPB-206ENST00000559790 NLRP7Q8WX94 980 aa21.11■□□□□ 0.97
CDC42BPB-206ENST00000559790 FAM122AQ96E09 287 aa21.11■□□□□ 0.97
CDC42BPB-206ENST00000559790 S1PR5Q9H228 398 aa21.11■□□□□ 0.97
CDC42BPB-206ENST00000559790 TLE6Q9H808 572 aa21.11■□□□□ 0.97
CDC42BPB-206ENST00000559790 IFT122Q9HBG6 1241 aa21.11■□□□□ 0.97
CDC42BPB-206ENST00000559790 AAASQ9NRG9 546 aa21.11■□□□□ 0.97
CDC42BPB-206ENST00000559790 CDH22Q9UJ99 828 aa21.11■□□□□ 0.97
CDC42BPB-206ENST00000559790 HCN4Q9Y3Q4 1203 aa21.11■□□□□ 0.97
CDC42BPB-206ENST00000559790 MTCL1Q9Y4B5 1905 aaKnown RBP21.1■□□□□ 0.97
CDC42BPB-206ENST00000559790 LETM2Q2VYF4 491 aa21.1■□□□□ 0.97
CDC42BPB-206ENST00000559790 PPP4R3AQ6IN85 833 aa21.1■□□□□ 0.97
CDC42BPB-206ENST00000559790 SYCE2Q6PIF2 218 aa21.1■□□□□ 0.97
CDC42BPB-206ENST00000559790 NEK8Q86SG6 692 aa21.1■□□□□ 0.97
CDC42BPB-206ENST00000559790 POTEDQ86YR6 584 aa21.1■□□□□ 0.97
CDC42BPB-206ENST00000559790 PPP2R3CQ969Q6 453 aa21.1■□□□□ 0.97
CDC42BPB-206ENST00000559790 RNF216Q9NWF9 866 aaPredicted RBP21.1■□□□□ 0.97
CDC42BPB-206ENST00000559790 TRIP11Q15643 1979 aa21.1■□□□□ 0.97
CDC42BPB-206ENST00000559790 HOXA2O43364 376 aa21.09■□□□□ 0.97
CDC42BPB-206ENST00000559790 PHKA2P46019 1235 aa21.09■□□□□ 0.97
CDC42BPB-206ENST00000559790 AK2P54819 239 aa21.09■□□□□ 0.97
CDC42BPB-206ENST00000559790 PSMC5P62195 406 aa21.09■□□□□ 0.97
CDC42BPB-206ENST00000559790 HFE2Q6ZVN8 426 aa21.09■□□□□ 0.97
CDC42BPB-206ENST00000559790 ZNF410Q86VK4 478 aa21.09■□□□□ 0.97
CDC42BPB-206ENST00000559790 FEZF2Q8TBJ5 459 aa21.09■□□□□ 0.97
CDC42BPB-206ENST00000559790 LPPQ93052 612 aa21.09■□□□□ 0.97
CDC42BPB-206ENST00000559790 ZNF558Q96NG5 402 aa21.09■□□□□ 0.97
CDC42BPB-206ENST00000559790 POP1Q99575 1024 aaKnown RBP21.09■□□□□ 0.97
CDC42BPB-206ENST00000559790 TCF25Q9BQ70 676 aa21.09■□□□□ 0.97
CDC42BPB-206ENST00000559790 VN1R3Q9BXE9 311 aa21.09■□□□□ 0.97
CDC42BPB-206ENST00000559790 DHX33Q9H6R0 707 aaKnown RBP21.09■□□□□ 0.97
CDC42BPB-206ENST00000559790 MINDY3Q9H8M7 445 aa21.09■□□□□ 0.97
CDC42BPB-206ENST00000559790 DOCK8Q8NF50 2099 aa21.09■□□□□ 0.97
CDC42BPB-206ENST00000559790 CACNA1HO95180 2353 aa21.08■□□□□ 0.97
CDC42BPB-206ENST00000559790 EOMESO95936 686 aa21.08■□□□□ 0.97
CDC42BPB-206ENST00000559790 ZSCAN20P17040 1043 aaPredicted RBP21.08■□□□□ 0.97
CDC42BPB-206ENST00000559790 NR5A1Q13285 461 aa21.08■□□□□ 0.97
CDC42BPB-206ENST00000559790 PDE12Q6L8Q7 609 aaKnown RBP21.08■□□□□ 0.97
CDC42BPB-206ENST00000559790 RNF169Q8NCN4 708 aa21.08■□□□□ 0.97
CDC42BPB-206ENST00000559790 SCLT1Q96NL6 688 aa21.08■□□□□ 0.97
CDC42BPB-206ENST00000559790 CDCA3Q99618 268 aaPredicted RBP21.08■□□□□ 0.97
CDC42BPB-206ENST00000559790 CYP26B1Q9NR63 512 aa21.08■□□□□ 0.97
CDC42BPB-206ENST00000559790 SUCLA2Q9P2R7 463 aaPredicted RBP21.08■□□□□ 0.97
CDC42BPB-206ENST00000559790 DDX11L8A8MPP1 907 aa21.07■□□□□ 0.96
CDC42BPB-206ENST00000559790 ZBTB39O15060 712 aa21.07■□□□□ 0.96
CDC42BPB-206ENST00000559790 GCFC2P16383 781 aaKnown RBP21.07■□□□□ 0.96
CDC42BPB-206ENST00000559790 PPM1AP35813 382 aa21.07■□□□□ 0.96
CDC42BPB-206ENST00000559790 PIK3AP1Q6ZUJ8 805 aa21.07■□□□□ 0.96
CDC42BPB-206ENST00000559790 RHPN2Q8IUC4 686 aa21.07■□□□□ 0.96
CDC42BPB-206ENST00000559790 FAM20AQ96MK3 541 aa21.07■□□□□ 0.96
CDC42BPB-206ENST00000559790 GCOM2Q9BZD3 368 aaPredicted RBP21.07■□□□□ 0.96
CDC42BPB-206ENST00000559790 SLKQ9H2G2 1235 aaPredicted RBP21.07■□□□□ 0.96
CDC42BPB-206ENST00000559790 CHST12Q9NRB3 414 aa21.07■□□□□ 0.96
CDC42BPB-206ENST00000559790 SPG21Q9NZD8 308 aa21.07■□□□□ 0.96
CDC42BPB-206ENST00000559790 DOCK6Q96HP0 2047 aa21.07■□□□□ 0.96
CDC42BPB-206ENST00000559790 C2orf71A6NGG8 1288 aa21.06■□□□□ 0.96
CDC42BPB-206ENST00000559790 NT5C1B-RDH14C9J2C7 533 aa21.06■□□□□ 0.96
CDC42BPB-206ENST00000559790 QARSP47897 775 aaKnown RBP21.06■□□□□ 0.96
CDC42BPB-206ENST00000559790 AFF1P51825 1210 aaKnown RBP21.06■□□□□ 0.96
CDC42BPB-206ENST00000559790 BCAR1P56945 870 aa21.06■□□□□ 0.96
CDC42BPB-206ENST00000559790 ME3Q16798 604 aa21.06■□□□□ 0.96
CDC42BPB-206ENST00000559790 UBXN11Q5T124 520 aa21.06■□□□□ 0.96
CDC42BPB-206ENST00000559790 ANKRD54Q6NXT1 300 aa21.06■□□□□ 0.96
CDC42BPB-206ENST00000559790 CPLX2Q6PUV4 134 aaKnown RBP21.06■□□□□ 0.96
CDC42BPB-206ENST00000559790 NECAB1Q8N987 351 aa21.06■□□□□ 0.96
CDC42BPB-206ENST00000559790 MICAL1Q8TDZ2 1067 aa21.06■□□□□ 0.96
CDC42BPB-206ENST00000559790 NLRP4Q96MN2 994 aa21.06■□□□□ 0.96
CDC42BPB-206ENST00000559790 LXNQ9BS40 222 aa21.06■□□□□ 0.96
CDC42BPB-206ENST00000559790 XPNPEP1Q9NQW7 623 aa21.06■□□□□ 0.96
CDC42BPB-206ENST00000559790 AGPAT5Q9NUQ2 364 aa21.06■□□□□ 0.96
CDC42BPB-206ENST00000559790 DACT1Q9NYF0 836 aa21.06■□□□□ 0.96
CDC42BPB-206ENST00000559790 RGL1Q9NZL6 768 aa21.06■□□□□ 0.96
CDC42BPB-206ENST00000559790 PIN4Q9Y237 131 aaKnown RBP21.06■□□□□ 0.96
CDC42BPB-206ENST00000559790 CCDC194A0A1B0GVG4 234 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms