RNA–Protein interactions for RNA: ENST00000559556.5

TPM1-220, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TPM1, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-220ENST00000559556 B3GNT9Q6UX72 402 aa14.76□□□□□ -0.05
TPM1-220ENST00000559556 ZNF668Q96K58 619 aaPredicted RBP14.76□□□□□ -0.05
TPM1-220ENST00000559556 CEP89Q96ST8 783 aa14.76□□□□□ -0.05
TPM1-220ENST00000559556 NCOA5Q9HCD5 579 aaKnown RBP14.76□□□□□ -0.05
TPM1-220ENST00000559556 DACT1Q9NYF0 836 aa14.76□□□□□ -0.05
TPM1-220ENST00000559556 SPG21Q9NZD8 308 aa14.76□□□□□ -0.05
TPM1-220ENST00000559556 CYP3A7-CYP3A51PA0A087WV96 503 aa14.75□□□□□ -0.05
TPM1-220ENST00000559556 CYP3A7P24462 503 aa14.75□□□□□ -0.05
TPM1-220ENST00000559556 PDIA3P30101 505 aaKnown RBP14.75□□□□□ -0.05
TPM1-220ENST00000559556 Q4G0T1 1027 aa14.75□□□□□ -0.05
TPM1-220ENST00000559556 SLC39A11Q8N1S5 342 aa14.75□□□□□ -0.05
TPM1-220ENST00000559556 FBXL6Q8N531 539 aa14.75□□□□□ -0.05
TPM1-220ENST00000559556 PRSS33Q8NF86 280 aa14.75□□□□□ -0.05
TPM1-220ENST00000559556 HELQQ8TDG4 1101 aa14.75□□□□□ -0.05
TPM1-220ENST00000559556 TBCKQ8TEA7 893 aa14.75□□□□□ -0.05
TPM1-220ENST00000559556 NLRP7Q8WX94 980 aa14.75□□□□□ -0.05
TPM1-220ENST00000559556 RSPH1Q8WYR4 309 aa14.75□□□□□ -0.05
TPM1-220ENST00000559556 PBXIP1Q96AQ6 731 aa14.75□□□□□ -0.05
TPM1-220ENST00000559556 SCLT1Q96NL6 688 aa14.75□□□□□ -0.05
TPM1-220ENST00000559556 TRAIPQ9BWF2 469 aa14.75□□□□□ -0.05
TPM1-220ENST00000559556 MRPL9Q9BYD2 267 aaKnown RBP14.75□□□□□ -0.05
TPM1-220ENST00000559556 NIFKQ9BYG3 293 aaKnown RBP14.75□□□□□ -0.05
TPM1-220ENST00000559556 C22orf23Q9BZE7 217 aa14.75□□□□□ -0.05
TPM1-220ENST00000559556 PDCD11Q14690 1871 aaKnown RBP14.75□□□□□ -0.05
TPM1-220ENST00000559556 IGKV6-21A0A0C4DH24 114 aa14.74□□□□□ -0.05
TPM1-220ENST00000559556 M0R2N6 131 aa14.74□□□□□ -0.05
TPM1-220ENST00000559556 STBD1O95210 358 aa14.74□□□□□ -0.05
TPM1-220ENST00000559556 FGFR4P22455 802 aa14.74□□□□□ -0.05
TPM1-220ENST00000559556 PSMA5P28066 241 aa14.74□□□□□ -0.05
TPM1-220ENST00000559556 NLRP5P59047 1200 aa14.74□□□□□ -0.05
TPM1-220ENST00000559556 CCT2P78371 535 aaKnown RBP14.74□□□□□ -0.05
TPM1-220ENST00000559556 CDC42EP1Q00587 391 aa14.74□□□□□ -0.05
TPM1-220ENST00000559556 DRP2Q13474 957 aa14.74□□□□□ -0.05
TPM1-220ENST00000559556 TOB2Q14106 344 aaPredicted RBP14.74□□□□□ -0.05
TPM1-220ENST00000559556 SMC1AQ14683 1233 aaKnown RBP14.74□□□□□ -0.05
TPM1-220ENST00000559556 PTPN21Q16825 1174 aa14.74□□□□□ -0.05
TPM1-220ENST00000559556 XKR3Q5GH77 459 aa14.74□□□□□ -0.05
TPM1-220ENST00000559556 LLGL2Q6P1M3 1020 aa14.74□□□□□ -0.05
TPM1-220ENST00000559556 MOXD1Q6UVY6 613 aa14.74□□□□□ -0.05
TPM1-220ENST00000559556 MIER3Q7Z3K6 550 aa14.74□□□□□ -0.05
TPM1-220ENST00000559556 TMC7Q7Z402 723 aa14.74□□□□□ -0.05
TPM1-220ENST00000559556 SUGP1Q8IWZ8 645 aaKnown RBP14.74□□□□□ -0.05
TPM1-220ENST00000559556 RNF169Q8NCN4 708 aa14.74□□□□□ -0.05
TPM1-220ENST00000559556 GJA10Q969M2 543 aa14.74□□□□□ -0.05
TPM1-220ENST00000559556 ASIC4Q96FT7 647 aa14.74□□□□□ -0.05
TPM1-220ENST00000559556 MBOAT7Q96N66 472 aa14.74□□□□□ -0.05
TPM1-220ENST00000559556 PRRX2Q99811 253 aa14.74□□□□□ -0.05
TPM1-220ENST00000559556 CHST12Q9NRB3 414 aa14.74□□□□□ -0.05
TPM1-220ENST00000559556 SEPT9Q9UHD8 586 aaPredicted RBP14.74□□□□□ -0.05
TPM1-220ENST00000559556 PCDHA4Q9UN74 947 aa14.74□□□□□ -0.05
TPM1-220ENST00000559556 DCHS1Q96JQ0 3298 aa14.74□□□□□ -0.05
TPM1-220ENST00000559556 C2orf71A6NGG8 1288 aa14.73□□□□□ -0.05
TPM1-220ENST00000559556 REC8O95072 547 aa14.73□□□□□ -0.05
TPM1-220ENST00000559556 TDP2O95551 362 aa14.73□□□□□ -0.05
TPM1-220ENST00000559556 PHKA2P46019 1235 aa14.73□□□□□ -0.05
TPM1-220ENST00000559556 BCAR1P56945 870 aa14.73□□□□□ -0.05
TPM1-220ENST00000559556 NPY5RQ15761 445 aa14.73□□□□□ -0.05
TPM1-220ENST00000559556 MTERF2Q49AM1 385 aa14.73□□□□□ -0.05
TPM1-220ENST00000559556 ZNF410Q86VK4 478 aa14.73□□□□□ -0.05
TPM1-220ENST00000559556 TRIM22Q8IYM9 498 aa14.73□□□□□ -0.05
TPM1-220ENST00000559556 FAM177A1Q8N128 213 aaPredicted RBP14.73□□□□□ -0.05
TPM1-220ENST00000559556 MRPL43Q8N983 215 aaKnown RBP14.73□□□□□ -0.05
TPM1-220ENST00000559556 DAGLBQ8NCG7 672 aa14.73□□□□□ -0.05
TPM1-220ENST00000559556 ETNPPLQ8TBG4 499 aa14.73□□□□□ -0.05
TPM1-220ENST00000559556 CASP10Q92851 521 aa14.73□□□□□ -0.05
TPM1-220ENST00000559556 GCOM2Q9BZD3 368 aaPredicted RBP14.73□□□□□ -0.05
TPM1-220ENST00000559556 HCFC2Q9Y5Z7 792 aa14.73□□□□□ -0.05
TPM1-220ENST00000559556 CACNA1IQ9P0X4 2223 aa14.73□□□□□ -0.05
TPM1-220ENST00000559556 EP300Q09472 2414 aaPredicted RBP14.73□□□□□ -0.05
TPM1-220ENST00000559556 A0A087WZ62 844 aa14.72□□□□□ -0.05
TPM1-220ENST00000559556 CARNS1A5YM72 827 aa14.72□□□□□ -0.05
TPM1-220ENST00000559556 TMEM150BA6NC51 233 aa14.72□□□□□ -0.05
TPM1-220ENST00000559556 CSDE1O75534 798 aaKnown RBP14.72□□□□□ -0.05
TPM1-220ENST00000559556 SFPQP23246 707 aaKnown RBP eCLIP14.72□□□□□ -0.05
TPM1-220ENST00000559556 ALDH7A1P49419 539 aaKnown RBP14.72□□□□□ -0.05
TPM1-220ENST00000559556 DNM2P50570 870 aa14.72□□□□□ -0.05
TPM1-220ENST00000559556 PTPN5P54829 565 aa14.72□□□□□ -0.05
TPM1-220ENST00000559556 SSRP1Q08945 709 aaKnown RBP14.72□□□□□ -0.05
TPM1-220ENST00000559556 TPRNQ4KMQ1 711 aa14.72□□□□□ -0.05
TPM1-220ENST00000559556 IER5LQ5T953 404 aa14.72□□□□□ -0.05
TPM1-220ENST00000559556 RUFY3Q7L099 469 aa14.72□□□□□ -0.05
TPM1-220ENST00000559556 BLIDQ8IZY5 108 aa14.72□□□□□ -0.05
TPM1-220ENST00000559556 TMEM169Q96HH4 297 aa14.72□□□□□ -0.05
TPM1-220ENST00000559556 FDXACB1Q9BRP7 624 aaPredicted RBP14.72□□□□□ -0.05
TPM1-220ENST00000559556 APOL5Q9BWW9 433 aa14.72□□□□□ -0.05
TPM1-220ENST00000559556 ZBP1Q9H171 429 aa14.72□□□□□ -0.05
TPM1-220ENST00000559556 NR2E1Q9Y466 385 aa14.72□□□□□ -0.05
TPM1-220ENST00000559556 EPB41L2O43491 1005 aaKnown RBP14.71□□□□□ -0.05
TPM1-220ENST00000559556 ZC3H11AO75152 810 aaKnown RBP eCLIP14.71□□□□□ -0.05
TPM1-220ENST00000559556 MAFO75444 373 aaPredicted RBP14.71□□□□□ -0.05
TPM1-220ENST00000559556 DEXIO95424 95 aa14.71□□□□□ -0.05
TPM1-220ENST00000559556 SKIP12755 728 aa14.71□□□□□ -0.05
TPM1-220ENST00000559556 ITIH3Q06033 890 aa14.71□□□□□ -0.05
TPM1-220ENST00000559556 TWF2Q6IBS0 349 aaKnown RBP14.71□□□□□ -0.05
TPM1-220ENST00000559556 GALNT17Q6IS24 598 aa14.71□□□□□ -0.05
TPM1-220ENST00000559556 ZNF274Q96GC6 653 aaPredicted RBP14.71□□□□□ -0.05
TPM1-220ENST00000559556 NECTIN4Q96NY8 510 aa14.71□□□□□ -0.05
TPM1-220ENST00000559556 INO80BQ9C086 356 aaPredicted RBP14.71□□□□□ -0.05
TPM1-220ENST00000559556 POMKQ9H5K3 350 aa14.71□□□□□ -0.05
TPM1-220ENST00000559556 ZSWIM6Q9HCJ5 1215 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms