RNA–Protein interactions for RNA: ENST00000559179.1

TRPM1-210, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

TSL 1 (best) BASIC

Gene TRPM1, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-210ENST00000559179 POMKQ9H5K3 350 aa13.91□□□□□ -0.18
TRPM1-210ENST00000559179 FAM217BQ9NTX9 383 aaPredicted RBP13.91□□□□□ -0.18
TRPM1-210ENST00000559179 RNF19AQ9NV58 838 aa13.91□□□□□ -0.18
TRPM1-210ENST00000559179 CDH22Q9UJ99 828 aa13.91□□□□□ -0.18
TRPM1-210ENST00000559179 PIEZO1Q92508 2521 aa13.91□□□□□ -0.18
TRPM1-210ENST00000559179 A0A0U1RQF3 1178 aa13.9□□□□□ -0.18
TRPM1-210ENST00000559179 ESYT2A0FGR8 921 aa13.9□□□□□ -0.18
TRPM1-210ENST00000559179 C2CD4DB7Z1M9 353 aa13.9□□□□□ -0.18
TRPM1-210ENST00000559179 PRPF3O43395 683 aaKnown RBP13.9□□□□□ -0.18
TRPM1-210ENST00000559179 SKIP12755 728 aa13.9□□□□□ -0.18
TRPM1-210ENST00000559179 CPA1P15085 419 aa13.9□□□□□ -0.18
TRPM1-210ENST00000559179 SFNP31947 248 aa13.9□□□□□ -0.18
TRPM1-210ENST00000559179 JAK3P52333 1124 aa13.9□□□□□ -0.18
TRPM1-210ENST00000559179 RCAN1P53805 252 aa13.9□□□□□ -0.18
TRPM1-210ENST00000559179 CDC42EP1Q00587 391 aa13.9□□□□□ -0.18
TRPM1-210ENST00000559179 KCNC3Q14003 757 aa13.9□□□□□ -0.18
TRPM1-210ENST00000559179 MIER3Q7Z3K6 550 aa13.9□□□□□ -0.18
TRPM1-210ENST00000559179 RASEFQ8IZ41 740 aa13.9□□□□□ -0.18
TRPM1-210ENST00000559179 AUTS2Q8WXX7 1259 aa13.9□□□□□ -0.18
TRPM1-210ENST00000559179 BRF1Q92994 677 aa13.9□□□□□ -0.18
TRPM1-210ENST00000559179 JAKMIP1Q96N16 626 aaKnown RBP13.9□□□□□ -0.18
TRPM1-210ENST00000559179 INO80BQ9C086 356 aaPredicted RBP13.9□□□□□ -0.18
TRPM1-210ENST00000559179 LIMD1Q9UGP4 676 aa13.9□□□□□ -0.18
TRPM1-210ENST00000559179 ZNF318Q5VUA4 2279 aa13.9□□□□□ -0.18
TRPM1-210ENST00000559179 KMT2EQ8IZD2 1858 aa13.89□□□□□ -0.19
TRPM1-210ENST00000559179 DDX11L8A8MPP1 907 aa13.89□□□□□ -0.19
TRPM1-210ENST00000559179 ADAMTS3O15072 1205 aa13.89□□□□□ -0.19
TRPM1-210ENST00000559179 MSH4O15457 936 aa13.89□□□□□ -0.19
TRPM1-210ENST00000559179 SFPQP23246 707 aaKnown RBP eCLIP13.89□□□□□ -0.19
TRPM1-210ENST00000559179 GIT2Q14161 759 aa13.89□□□□□ -0.19
TRPM1-210ENST00000559179 BLOC1S2Q6QNY1 142 aa13.89□□□□□ -0.19
TRPM1-210ENST00000559179 GLB1LQ6UWU2 654 aa13.89□□□□□ -0.19
TRPM1-210ENST00000559179 CABP7Q86V35 215 aa13.89□□□□□ -0.19
TRPM1-210ENST00000559179 PLCD3Q8N3E9 789 aa13.89□□□□□ -0.19
TRPM1-210ENST00000559179 LPPQ93052 612 aa13.89□□□□□ -0.19
TRPM1-210ENST00000559179 FAM193BQ96PV7 902 aaPredicted RBP13.89□□□□□ -0.19
TRPM1-210ENST00000559179 RIT2Q99578 217 aa13.89□□□□□ -0.19
TRPM1-210ENST00000559179 CHST12Q9NRB3 414 aa13.89□□□□□ -0.19
TRPM1-210ENST00000559179 DZANK1Q9NVP4 752 aa13.89□□□□□ -0.19
TRPM1-210ENST00000559179 PIN4Q9Y237 131 aaKnown RBP13.89□□□□□ -0.19
TRPM1-210ENST00000559179 A0A087WZ62 844 aa13.88□□□□□ -0.19
TRPM1-210ENST00000559179 CARNS1A5YM72 827 aa13.88□□□□□ -0.19
TRPM1-210ENST00000559179 STK25O00506 426 aa13.88□□□□□ -0.19
TRPM1-210ENST00000559179 GALR2O43603 387 aaPredicted RBP13.88□□□□□ -0.19
TRPM1-210ENST00000559179 ZNF862O60290 1169 aa13.88□□□□□ -0.19
TRPM1-210ENST00000559179 CDC45O75419 566 aa13.88□□□□□ -0.19
TRPM1-210ENST00000559179 BRD1O95696 1058 aa13.88□□□□□ -0.19
TRPM1-210ENST00000559179 SSBP05455 408 aaKnown RBP eCLIP13.88□□□□□ -0.19
TRPM1-210ENST00000559179 ASGR2P07307 311 aa13.88□□□□□ -0.19
TRPM1-210ENST00000559179 CIITAP33076 1130 aa13.88□□□□□ -0.19
TRPM1-210ENST00000559179 PHKA2P46019 1235 aa13.88□□□□□ -0.19
TRPM1-210ENST00000559179 NUBP1P53384 320 aa13.88□□□□□ -0.19
TRPM1-210ENST00000559179 UGCGQ16739 394 aa13.88□□□□□ -0.19
TRPM1-210ENST00000559179 TSGA10IPQ3SY00 556 aa13.88□□□□□ -0.19
TRPM1-210ENST00000559179 BMP2KLQ5H9B9 411 aa13.88□□□□□ -0.19
TRPM1-210ENST00000559179 KANK3Q6NY19 840 aa13.88□□□□□ -0.19
TRPM1-210ENST00000559179 CATSPER4Q7RTX7 472 aa13.88□□□□□ -0.19
TRPM1-210ENST00000559179 RHPN2Q8IUC4 686 aa13.88□□□□□ -0.19
TRPM1-210ENST00000559179 URGCPQ8TCY9 931 aa13.88□□□□□ -0.19
TRPM1-210ENST00000559179 CRYGNQ8WXF5 182 aa13.88□□□□□ -0.19
TRPM1-210ENST00000559179 ACSF2Q96CM8 615 aaPredicted RBP13.88□□□□□ -0.19
TRPM1-210ENST00000559179 PGBD4Q96DM1 585 aa13.88□□□□□ -0.19
TRPM1-210ENST00000559179 NLRP4Q96MN2 994 aa13.88□□□□□ -0.19
TRPM1-210ENST00000559179 SH2D3AQ9BRG2 576 aa13.88□□□□□ -0.19
TRPM1-210ENST00000559179 FDXACB1Q9BRP7 624 aaPredicted RBP13.88□□□□□ -0.19
TRPM1-210ENST00000559179 SLKQ9H2G2 1235 aaPredicted RBP13.88□□□□□ -0.19
TRPM1-210ENST00000559179 UNC45AQ9H3U1 944 aa13.88□□□□□ -0.19
TRPM1-210ENST00000559179 VPS54Q9P1Q0 977 aa13.88□□□□□ -0.19
TRPM1-210ENST00000559179 SUCLA2Q9P2R7 463 aaPredicted RBP13.88□□□□□ -0.19
TRPM1-210ENST00000559179 EPCAMP16422 314 aa13.87□□□□□ -0.19
TRPM1-210ENST00000559179 RFX1P22670 979 aa13.87□□□□□ -0.19
TRPM1-210ENST00000559179 KLRC2P26717 231 aa13.87□□□□□ -0.19
TRPM1-210ENST00000559179 USP11P51784 963 aa13.87□□□□□ -0.19
TRPM1-210ENST00000559179 CCT2P78371 535 aaKnown RBP13.87□□□□□ -0.19
TRPM1-210ENST00000559179 XKR3Q5GH77 459 aa13.87□□□□□ -0.19
TRPM1-210ENST00000559179 NOMO2Q5JPE7 1267 aa13.87□□□□□ -0.19
TRPM1-210ENST00000559179 TMC5Q6UXY8 1006 aa13.87□□□□□ -0.19
TRPM1-210ENST00000559179 PPFIBP1Q86W92 1011 aa13.87□□□□□ -0.19
TRPM1-210ENST00000559179 TRIM22Q8IYM9 498 aa13.87□□□□□ -0.19
TRPM1-210ENST00000559179 LINC01465Q8N7H1 131 aa13.87□□□□□ -0.19
TRPM1-210ENST00000559179 FLCNQ8NFG4 579 aa13.87□□□□□ -0.19
TRPM1-210ENST00000559179 GJA10Q969M2 543 aa13.87□□□□□ -0.19
TRPM1-210ENST00000559179 SNX27Q96L92 541 aa13.87□□□□□ -0.19
TRPM1-210ENST00000559179 EMILIN2Q9BXX0 1053 aa13.87□□□□□ -0.19
TRPM1-210ENST00000559179 SMOC2Q9H3U7 446 aa13.87□□□□□ -0.19
TRPM1-210ENST00000559179 MARCH6O60337 910 aa13.86□□□□□ -0.19
TRPM1-210ENST00000559179 POLGP54098 1239 aaPredicted RBP13.86□□□□□ -0.19
TRPM1-210ENST00000559179 DRP2Q13474 957 aa13.86□□□□□ -0.19
TRPM1-210ENST00000559179 ASTLQ6HA08 431 aaPredicted RBP13.86□□□□□ -0.19
TRPM1-210ENST00000559179 KIAA1841Q6NSI8 718 aa13.86□□□□□ -0.19
TRPM1-210ENST00000559179 DDX53Q86TM3 631 aaKnown RBP13.86□□□□□ -0.19
TRPM1-210ENST00000559179 ZNF598Q86UK7 904 aaKnown RBP13.86□□□□□ -0.19
TRPM1-210ENST00000559179 TBCKQ8TEA7 893 aa13.86□□□□□ -0.19
TRPM1-210ENST00000559179 SLC5A5Q92911 643 aa13.86□□□□□ -0.19
TRPM1-210ENST00000559179 IGSF21Q96ID5 467 aa13.86□□□□□ -0.19
TRPM1-210ENST00000559179 JPH2Q9BR39 696 aaPredicted RBP13.86□□□□□ -0.19
TRPM1-210ENST00000559179 RNF26Q9BY78 433 aaPredicted RBP13.86□□□□□ -0.19
TRPM1-210ENST00000559179 C22orf23Q9BZE7 217 aa13.86□□□□□ -0.19
TRPM1-210ENST00000559179 ZBP1Q9H171 429 aa13.86□□□□□ -0.19
TRPM1-210ENST00000559179 NRDE2Q9H7Z3 1164 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms