RNA–Protein interactions for RNA: ENST00000558988.5

SPG11-213, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 3

Gene SPG11, Length 620 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-213ENST00000558988 TEX13BQ9BXU2 312 aa8.67□□□□□ -1.02
SPG11-213ENST00000558988 MTMR4Q9NYA4 1195 aa8.67□□□□□ -1.02
SPG11-213ENST00000558988 ZNFX1Q9P2E3 1918 aaKnown RBP8.67□□□□□ -1.02
SPG11-213ENST00000558988 ZHX1Q9UKY1 873 aaPredicted RBP8.67□□□□□ -1.02
SPG11-213ENST00000558988 ZNF236Q9UL36 1845 aa8.67□□□□□ -1.02
SPG11-213ENST00000558988 ZNF214Q9UL59 606 aaPredicted RBP8.67□□□□□ -1.02
SPG11-213ENST00000558988 STX8Q9UNK0 236 aa8.67□□□□□ -1.02
SPG11-213ENST00000558988 GREB1LQ9C091 1923 aaPredicted RBP8.66□□□□□ -1.02
SPG11-213ENST00000558988 TMEM232C9JQI7 657 aa8.66□□□□□ -1.02
SPG11-213ENST00000558988 DNM1LO00429 736 aa8.66□□□□□ -1.02
SPG11-213ENST00000558988 SEPT4O43236 478 aa8.66□□□□□ -1.02
SPG11-213ENST00000558988 RANBP6O60518 1105 aaKnown RBP8.66□□□□□ -1.02
SPG11-213ENST00000558988 PGK1P00558 417 aa8.66□□□□□ -1.02
SPG11-213ENST00000558988 RARBP10826 455 aa8.66□□□□□ -1.02
SPG11-213ENST00000558988 COL6A1P12109 1028 aa8.66□□□□□ -1.02
SPG11-213ENST00000558988 MCCP23508 829 aa8.66□□□□□ -1.02
SPG11-213ENST00000558988 ADCYAP1R1P41586 468 aa8.66□□□□□ -1.02
SPG11-213ENST00000558988 SLC1A4P43007 532 aa8.66□□□□□ -1.02
SPG11-213ENST00000558988 PDE1AP54750 535 aa8.66□□□□□ -1.02
SPG11-213ENST00000558988 CCDC96Q2M329 555 aa8.66□□□□□ -1.02
SPG11-213ENST00000558988 TRIM60Q495X7 471 aa8.66□□□□□ -1.02
SPG11-213ENST00000558988 VPS53Q5VIR6 699 aa8.66□□□□□ -1.02
SPG11-213ENST00000558988 CCDC174Q6PII3 467 aa8.66□□□□□ -1.02
SPG11-213ENST00000558988 RASGRP2Q7LDG7 609 aa8.66□□□□□ -1.02
SPG11-213ENST00000558988 CCNJLQ8IV13 435 aa8.66□□□□□ -1.02
SPG11-213ENST00000558988 ABRAQ8N0Z2 381 aa8.66□□□□□ -1.02
SPG11-213ENST00000558988 ANKRD35Q8N283 1001 aa8.66□□□□□ -1.02
SPG11-213ENST00000558988 PRPF38AQ8NAV1 312 aaKnown RBP8.66□□□□□ -1.02
SPG11-213ENST00000558988 REPS2Q8NFH8 660 aa8.66□□□□□ -1.02
SPG11-213ENST00000558988 EVI5LQ96CN4 794 aa8.66□□□□□ -1.02
SPG11-213ENST00000558988 FAM227BQ96M60 508 aa8.66□□□□□ -1.02
SPG11-213ENST00000558988 PRO3102Q9H379 93 aa8.66□□□□□ -1.02
SPG11-213ENST00000558988 CCDC86Q9H6F5 360 aaKnown RBP8.66□□□□□ -1.02
SPG11-213ENST00000558988 XPNPEP3Q9NQH7 507 aa8.66□□□□□ -1.02
SPG11-213ENST00000558988 CNPY2Q9Y2B0 182 aa8.66□□□□□ -1.02
SPG11-213ENST00000558988 RIPK3Q9Y572 518 aa8.66□□□□□ -1.02
SPG11-213ENST00000558988 MKI67P46013 3256 aaKnown RBP8.66□□□□□ -1.02
SPG11-213ENST00000558988 PLXNA1Q9UIW2 1896 aa8.66□□□□□ -1.02
SPG11-213ENST00000558988 IGKV6D-41A0A0C4DH26 115 aa8.65□□□□□ -1.02
SPG11-213ENST00000558988 A0A0D9SFI3 127 aa8.65□□□□□ -1.02
SPG11-213ENST00000558988 SLFN14P0C7P3 912 aa8.65□□□□□ -1.02
SPG11-213ENST00000558988 SRFP11831 508 aa8.65□□□□□ -1.02
SPG11-213ENST00000558988 COPB2P35606 906 aa8.65□□□□□ -1.02
SPG11-213ENST00000558988 HAND2P61296 217 aa8.65□□□□□ -1.02
SPG11-213ENST00000558988 NMIQ13287 307 aaPredicted RBP8.65□□□□□ -1.02
SPG11-213ENST00000558988 LRRC41Q15345 812 aa8.65□□□□□ -1.02
SPG11-213ENST00000558988 KCTD1Q719H9 257 aa8.65□□□□□ -1.02
SPG11-213ENST00000558988 Q7L0L9 218 aa8.65□□□□□ -1.02
SPG11-213ENST00000558988 ABHD4Q8TB40 342 aa8.65□□□□□ -1.02
SPG11-213ENST00000558988 SNX29Q8TEQ0 813 aa8.65□□□□□ -1.02
SPG11-213ENST00000558988 GDF15Q99988 308 aa8.65□□□□□ -1.02
SPG11-213ENST00000558988 TINF2Q9BSI4 451 aa8.65□□□□□ -1.02
SPG11-213ENST00000558988 GTF2IRD1Q9UHL9 959 aa8.65□□□□□ -1.02
SPG11-213ENST00000558988 FEM1BQ9UK73 627 aa8.65□□□□□ -1.02
SPG11-213ENST00000558988 ADAMTS5Q9UNA0 930 aa8.65□□□□□ -1.02
SPG11-213ENST00000558988 SMCHD1A6NHR9 2005 aa8.64□□□□□ -1.03
SPG11-213ENST00000558988 FRMPD2Q68DX3 1309 aaPredicted RBP8.64□□□□□ -1.03
SPG11-213ENST00000558988 SALL3Q9BXA9 1300 aa8.64□□□□□ -1.03
SPG11-213ENST00000558988 A0A1W2PPC1 479 aa8.64□□□□□ -1.03
SPG11-213ENST00000558988 FOXP2O15409 715 aa8.64□□□□□ -1.03
SPG11-213ENST00000558988 TRIM13O60858 407 aa8.64□□□□□ -1.03
SPG11-213ENST00000558988 CELA3BP08861 270 aa8.64□□□□□ -1.03
SPG11-213ENST00000558988 ALAS1P13196 640 aa8.64□□□□□ -1.03
SPG11-213ENST00000558988 MZF1P28698 734 aaPredicted RBP8.64□□□□□ -1.03
SPG11-213ENST00000558988 CLCN7P51798 805 aa8.64□□□□□ -1.03
SPG11-213ENST00000558988 HDAC1Q13547 482 aaPredicted RBP8.64□□□□□ -1.03
SPG11-213ENST00000558988 ZXDCQ2QGD7 858 aaPredicted RBP8.64□□□□□ -1.03
SPG11-213ENST00000558988 SLC39A5Q6ZMH5 540 aa8.64□□□□□ -1.03
SPG11-213ENST00000558988 NOL8Q76FK4 1167 aaKnown RBP8.64□□□□□ -1.03
SPG11-213ENST00000558988 TDHQ8IZJ6 230 aa8.64□□□□□ -1.03
SPG11-213ENST00000558988 EXOC6Q8TAG9 804 aa8.64□□□□□ -1.03
SPG11-213ENST00000558988 RWDD1Q9H446 243 aaPredicted RBP8.64□□□□□ -1.03
SPG11-213ENST00000558988 PLIN4Q96Q06 1357 aa8.63□□□□□ -1.03
SPG11-213ENST00000558988 BRCA2P51587 3418 aa8.63□□□□□ -1.03
SPG11-213ENST00000558988 MCM3APO60318 1980 aa8.63□□□□□ -1.03
SPG11-213ENST00000558988 ADAMTS20P59510 1910 aa8.63□□□□□ -1.03
SPG11-213ENST00000558988 PQBP1O60828 265 aaKnown RBP8.63□□□□□ -1.03
SPG11-213ENST00000558988 AKR1A1P14550 325 aa8.63□□□□□ -1.03
SPG11-213ENST00000558988 SLC16A2P36021 539 aa8.63□□□□□ -1.03
SPG11-213ENST00000558988 STAT2P52630 851 aa8.63□□□□□ -1.03
SPG11-213ENST00000558988 IRX6P78412 446 aaPredicted RBP8.63□□□□□ -1.03
SPG11-213ENST00000558988 CNTN2Q02246 1040 aa8.63□□□□□ -1.03
SPG11-213ENST00000558988 MCMDC2Q4G0Z9 681 aa8.63□□□□□ -1.03
SPG11-213ENST00000558988 NSMFQ6X4W1 530 aa8.63□□□□□ -1.03
SPG11-213ENST00000558988 RNF180Q86T96 592 aa8.63□□□□□ -1.03
SPG11-213ENST00000558988 ZNF589Q86UQ0 364 aaPredicted RBP8.63□□□□□ -1.03
SPG11-213ENST00000558988 GMCL1P1Q8NEA9 526 aa8.63□□□□□ -1.03
SPG11-213ENST00000558988 BAHD1Q8TBE0 780 aaPredicted RBP8.63□□□□□ -1.03
SPG11-213ENST00000558988 TCF12Q99081 682 aa8.63□□□□□ -1.03
SPG11-213ENST00000558988 SLC38A10Q9HBR0 1119 aa8.63□□□□□ -1.03
SPG11-213ENST00000558988 HELLSQ9NRZ9 838 aa8.63□□□□□ -1.03
SPG11-213ENST00000558988 RNF146Q9NTX7 359 aa8.63□□□□□ -1.03
SPG11-213ENST00000558988 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.63□□□□□ -1.03
SPG11-213ENST00000558988 TACC3Q9Y6A5 838 aa8.63□□□□□ -1.03
SPG11-213ENST00000558988 DDX49Q9Y6V7 483 aaKnown RBP8.63□□□□□ -1.03
SPG11-213ENST00000558988 MYADML2A6NDP7 307 aa8.62□□□□□ -1.03
SPG11-213ENST00000558988 SUV39H1O43463 412 aa8.62□□□□□ -1.03
SPG11-213ENST00000558988 ZNF862O60290 1169 aa8.62□□□□□ -1.03
SPG11-213ENST00000558988 SNAI1O95863 264 aaPredicted RBP8.62□□□□□ -1.03
SPG11-213ENST00000558988 IGHA2P01877 340 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms