RNA–Protein interactions for RNA: ENST00000558910.2

TPM1-216, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-216ENST00000558910 RNF169Q8NCN4 708 aa13.45□□□□□ -0.26
TPM1-216ENST00000558910 RDM1Q8NG50 284 aa13.45□□□□□ -0.26
TPM1-216ENST00000558910 TOP1MTQ969P6 601 aa13.45□□□□□ -0.26
TPM1-216ENST00000558910 NLRP4Q96MN2 994 aa13.45□□□□□ -0.26
TPM1-216ENST00000558910 TGS1Q96RS0 853 aaKnown RBP13.45□□□□□ -0.26
TPM1-216ENST00000558910 EIF2AK1Q9BQI3 630 aaKnown RBP13.45□□□□□ -0.26
TPM1-216ENST00000558910 TMX1Q9H3N1 280 aa13.45□□□□□ -0.26
TPM1-216ENST00000558910 TTC12Q9H892 705 aaPredicted RBP13.45□□□□□ -0.26
TPM1-216ENST00000558910 PCDHA12Q9UN75 941 aa13.45□□□□□ -0.26
TPM1-216ENST00000558910 UNC80Q8N2C7 3258 aa13.44□□□□□ -0.26
TPM1-216ENST00000558910 MICAL3Q7RTP6 2002 aa13.44□□□□□ -0.26
TPM1-216ENST00000558910 SIP14410 1827 aa13.44□□□□□ -0.26
TPM1-216ENST00000558910 H3BQV1 296 aa13.44□□□□□ -0.26
TPM1-216ENST00000558910 GPR32O75388 356 aa13.44□□□□□ -0.26
TPM1-216ENST00000558910 STBD1O95210 358 aa13.44□□□□□ -0.26
TPM1-216ENST00000558910 P4HBP07237 508 aaKnown RBP13.44□□□□□ -0.26
TPM1-216ENST00000558910 TECP42680 631 aa13.44□□□□□ -0.26
TPM1-216ENST00000558910 GRB10Q13322 594 aa13.44□□□□□ -0.26
TPM1-216ENST00000558910 LONRF3Q496Y0 759 aa13.44□□□□□ -0.26
TPM1-216ENST00000558910 XKR9Q5GH70 373 aa13.44□□□□□ -0.26
TPM1-216ENST00000558910 TTC38Q5R3I4 469 aa13.44□□□□□ -0.26
TPM1-216ENST00000558910 SMYD5Q6GMV2 418 aa13.44□□□□□ -0.26
TPM1-216ENST00000558910 B3GNT9Q6UX72 402 aa13.44□□□□□ -0.26
TPM1-216ENST00000558910 MAEAQ7L5Y9 396 aa13.44□□□□□ -0.26
TPM1-216ENST00000558910 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.44□□□□□ -0.26
TPM1-216ENST00000558910 FBXO18Q8NFZ0 1043 aa13.44□□□□□ -0.26
TPM1-216ENST00000558910 TMEM143Q96AN5 459 aa13.44□□□□□ -0.26
TPM1-216ENST00000558910 CCDC43Q96MW1 224 aaKnown RBP13.44□□□□□ -0.26
TPM1-216ENST00000558910 ADAM2Q99965 735 aa13.44□□□□□ -0.26
TPM1-216ENST00000558910 ERVK-5Q9HDB9 667 aa13.44□□□□□ -0.26
TPM1-216ENST00000558910 SUCLA2Q9P2R7 463 aaPredicted RBP13.44□□□□□ -0.26
TPM1-216ENST00000558910 SMC3Q9UQE7 1217 aa13.44□□□□□ -0.26
TPM1-216ENST00000558910 A0A087WZ62 844 aa13.43□□□□□ -0.26
TPM1-216ENST00000558910 TBX3O15119 743 aa13.43□□□□□ -0.26
TPM1-216ENST00000558910 SRGAP2CP0DJJ0 459 aa13.43□□□□□ -0.26
TPM1-216ENST00000558910 YWHABP31946 246 aaKnown RBP13.43□□□□□ -0.26
TPM1-216ENST00000558910 CTNNB1P35222 781 aa13.43□□□□□ -0.26
TPM1-216ENST00000558910 CRYBB1P53674 252 aaPredicted RBP13.43□□□□□ -0.26
TPM1-216ENST00000558910 POLGP54098 1239 aaPredicted RBP13.43□□□□□ -0.26
TPM1-216ENST00000558910 BTG3Q14201 252 aaPredicted RBP13.43□□□□□ -0.26
TPM1-216ENST00000558910 SPOUT1Q5T280 376 aaKnown RBP13.43□□□□□ -0.26
TPM1-216ENST00000558910 NOSTRINQ8IVI9 506 aa13.43□□□□□ -0.26
TPM1-216ENST00000558910 FIBCD1Q8N539 461 aa13.43□□□□□ -0.26
TPM1-216ENST00000558910 PIGOQ8TEQ8 1089 aa13.43□□□□□ -0.26
TPM1-216ENST00000558910 FDXACB1Q9BRP7 624 aaPredicted RBP13.43□□□□□ -0.26
TPM1-216ENST00000558910 CYP26B1Q9NR63 512 aa13.43□□□□□ -0.26
TPM1-216ENST00000558910 NOL7Q9UMY1 257 aaKnown RBP13.43□□□□□ -0.26
TPM1-216ENST00000558910 LOXHD1Q8IVV2 1947 aa13.43□□□□□ -0.26
TPM1-216ENST00000558910 GPR182O15218 404 aa13.42□□□□□ -0.26
TPM1-216ENST00000558910 RPLP2P05387 115 aaKnown RBP13.42□□□□□ -0.26
TPM1-216ENST00000558910 DNM2P50570 870 aa13.42□□□□□ -0.26
TPM1-216ENST00000558910 GPC3P51654 580 aa13.42□□□□□ -0.26
TPM1-216ENST00000558910 SPIRE1Q08AE8 756 aa13.42□□□□□ -0.26
TPM1-216ENST00000558910 TARBP2Q15633 366 aaKnown RBP13.42□□□□□ -0.26
TPM1-216ENST00000558910 ZRSR1Q15695 479 aaKnown RBP13.42□□□□□ -0.26
TPM1-216ENST00000558910 NIFKQ9BYG3 293 aaKnown RBP13.42□□□□□ -0.26
TPM1-216ENST00000558910 BACH2Q9BYV9 841 aa13.42□□□□□ -0.26
TPM1-216ENST00000558910 ADAMTS10Q9H324 1103 aa13.42□□□□□ -0.26
TPM1-216ENST00000558910 FOXP1Q9H334 677 aaPredicted RBP13.42□□□□□ -0.26
TPM1-216ENST00000558910 ZSWIM4Q9H7M6 989 aa13.42□□□□□ -0.26
TPM1-216ENST00000558910 PCDHB7Q9Y5E2 793 aa13.42□□□□□ -0.26
TPM1-216ENST00000558910 MTCH2Q9Y6C9 303 aa13.42□□□□□ -0.26
TPM1-216ENST00000558910 KDM3AQ9Y4C1 1321 aa13.41□□□□□ -0.26
TPM1-216ENST00000558910 TBKBP1A7MCY6 615 aa13.41□□□□□ -0.26
TPM1-216ENST00000558910 DKC1O60832 514 aaKnown RBP eCLIP13.41□□□□□ -0.26
TPM1-216ENST00000558910 RNF40O75150 1001 aa13.41□□□□□ -0.26
TPM1-216ENST00000558910 SLITRK3O94933 977 aa13.41□□□□□ -0.26
TPM1-216ENST00000558910 OR52Z1P0C646 297 aa13.41□□□□□ -0.26
TPM1-216ENST00000558910 FGFR1P11362 822 aa13.41□□□□□ -0.26
TPM1-216ENST00000558910 ERVK-21P61565 698 aa13.41□□□□□ -0.26
TPM1-216ENST00000558910 HTRA4P83105 476 aaPredicted RBP13.41□□□□□ -0.26
TPM1-216ENST00000558910 GPM6BQ13491 265 aa13.41□□□□□ -0.26
TPM1-216ENST00000558910 EPC2Q52LR7 807 aa13.41□□□□□ -0.26
TPM1-216ENST00000558910 FAM102BQ5T8I3 360 aa13.41□□□□□ -0.26
TPM1-216ENST00000558910 EP400NLQ6ZTU2 488 aa13.41□□□□□ -0.26
TPM1-216ENST00000558910 NYAP1Q6ZVC0 841 aa13.41□□□□□ -0.26
TPM1-216ENST00000558910 OTUD6AQ7L8S5 288 aa13.41□□□□□ -0.26
TPM1-216ENST00000558910 TMEM192Q8IY95 271 aa13.41□□□□□ -0.26
TPM1-216ENST00000558910 LINC01465Q8N7H1 131 aa13.41□□□□□ -0.26
TPM1-216ENST00000558910 SLC7A3Q8WY07 619 aa13.41□□□□□ -0.26
TPM1-216ENST00000558910 MTMR9Q96QG7 549 aa13.41□□□□□ -0.26
TPM1-216ENST00000558910 FTHL17Q9BXU8 183 aa13.41□□□□□ -0.26
TPM1-216ENST00000558910 POLD4Q9HCU8 107 aa13.41□□□□□ -0.26
TPM1-216ENST00000558910 PCDHB6Q9Y5E3 794 aa13.41□□□□□ -0.26
TPM1-216ENST00000558910 ADGRA3Q8IWK6 1321 aa13.4□□□□□ -0.26
TPM1-216ENST00000558910 PRRC2BQ5JSZ5 2229 aaKnown RBP13.4□□□□□ -0.26
TPM1-216ENST00000558910 VPS37CA5D8V6 355 aaPredicted RBP13.4□□□□□ -0.26
TPM1-216ENST00000558910 USO1O60763 962 aaKnown RBP13.4□□□□□ -0.26
TPM1-216ENST00000558910 MAFO75444 373 aaPredicted RBP13.4□□□□□ -0.26
TPM1-216ENST00000558910 MED24O75448 989 aa13.4□□□□□ -0.26
TPM1-216ENST00000558910 STAG3L1P0CL83 205 aa13.4□□□□□ -0.26
TPM1-216ENST00000558910 ZSCAN20P17040 1043 aaPredicted RBP13.4□□□□□ -0.26
TPM1-216ENST00000558910 EMC2Q15006 297 aa13.4□□□□□ -0.26
TPM1-216ENST00000558910 SWT1Q5T5J6 900 aaKnown RBP13.4□□□□□ -0.26
TPM1-216ENST00000558910 LARP1BQ659C4 914 aaKnown RBP13.4□□□□□ -0.26
TPM1-216ENST00000558910 CEP89Q96ST8 783 aa13.4□□□□□ -0.26
TPM1-216ENST00000558910 GCOM2Q9BZD3 368 aaPredicted RBP13.4□□□□□ -0.26
TPM1-216ENST00000558910 KIF3AQ9Y496 699 aa13.4□□□□□ -0.26
TPM1-216ENST00000558910 MRPL42Q9Y6G3 142 aaKnown RBP13.4□□□□□ -0.26
TPM1-216ENST00000558910 SQORQ9Y6N5 450 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms