RNA–Protein interactions for RNA: ENST00000558500.5

LRRC28-207, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-207ENST00000558500 LETM2Q2VYF4 491 aa7.71□□□□□ -1.18
LRRC28-207ENST00000558500 VARS2Q5ST30 1063 aaKnown RBP7.71□□□□□ -1.18
LRRC28-207ENST00000558500 C15orf39Q6ZRI6 1047 aa7.71□□□□□ -1.18
LRRC28-207ENST00000558500 CYB5R4Q7L1T6 521 aa7.71□□□□□ -1.18
LRRC28-207ENST00000558500 PPFIBP1Q86W92 1011 aa7.71□□□□□ -1.18
LRRC28-207ENST00000558500 TMEM173Q86WV6 379 aaPredicted RBP7.71□□□□□ -1.18
LRRC28-207ENST00000558500 ECHDC2Q86YB7 292 aa7.71□□□□□ -1.18
LRRC28-207ENST00000558500 MAML2Q8IZL2 1156 aaPredicted RBP7.71□□□□□ -1.18
LRRC28-207ENST00000558500 SLC44A3Q8N4M1 653 aa7.71□□□□□ -1.18
LRRC28-207ENST00000558500 OXER1Q8TDS5 423 aa7.71□□□□□ -1.18
LRRC28-207ENST00000558500 BORCS6Q96GS4 357 aa7.71□□□□□ -1.18
LRRC28-207ENST00000558500 PPP1R16BQ96T49 567 aa7.71□□□□□ -1.18
LRRC28-207ENST00000558500 DSCC1Q9BVC3 393 aa7.71□□□□□ -1.18
LRRC28-207ENST00000558500 MRPL9Q9BYD2 267 aaKnown RBP7.71□□□□□ -1.18
LRRC28-207ENST00000558500 KCNH7Q9NS40 1196 aa7.71□□□□□ -1.18
LRRC28-207ENST00000558500 NCDNQ9UBB6 729 aa7.71□□□□□ -1.18
LRRC28-207ENST00000558500 RCAN3Q9UKA8 241 aa7.71□□□□□ -1.18
LRRC28-207ENST00000558500 SIT1Q9Y3P8 196 aa7.71□□□□□ -1.18
LRRC28-207ENST00000558500 PKD1L2Q7Z442 2459 aa7.71□□□□□ -1.18
LRRC28-207ENST00000558500 COL1A2P08123 1366 aa7.71□□□□□ -1.18
LRRC28-207ENST00000558500 IGKV6D-21A0A0A0MT36 114 aa7.7□□□□□ -1.18
LRRC28-207ENST00000558500 DCDC2BA2VCK2 349 aa7.7□□□□□ -1.18
LRRC28-207ENST00000558500 SPTLC1O15269 473 aa7.7□□□□□ -1.18
LRRC28-207ENST00000558500 GPR32O75388 356 aa7.7□□□□□ -1.18
LRRC28-207ENST00000558500 ATG7O95352 703 aa7.7□□□□□ -1.18
LRRC28-207ENST00000558500 SRFP11831 508 aa7.7□□□□□ -1.18
LRRC28-207ENST00000558500 GLULP15104 373 aa7.7□□□□□ -1.18
LRRC28-207ENST00000558500 ZSCAN20P17040 1043 aaPredicted RBP7.7□□□□□ -1.18
LRRC28-207ENST00000558500 SDSP20132 328 aa7.7□□□□□ -1.18
LRRC28-207ENST00000558500 GBP2P32456 591 aaPredicted RBP7.7□□□□□ -1.18
LRRC28-207ENST00000558500 LMNB2Q03252 620 aa7.7□□□□□ -1.18
LRRC28-207ENST00000558500 PTPN14Q15678 1187 aa7.7□□□□□ -1.18
LRRC28-207ENST00000558500 ZNF528Q3MIS6 628 aa7.7□□□□□ -1.18
LRRC28-207ENST00000558500 ZNF484Q5JVG2 852 aa7.7□□□□□ -1.18
LRRC28-207ENST00000558500 ANKRD45Q5TZF3 282 aa7.7□□□□□ -1.18
LRRC28-207ENST00000558500 DDX53Q86TM3 631 aaKnown RBP7.7□□□□□ -1.18
LRRC28-207ENST00000558500 ZNF598Q86UK7 904 aaKnown RBP7.7□□□□□ -1.18
LRRC28-207ENST00000558500 RNF169Q8NCN4 708 aa7.7□□□□□ -1.18
LRRC28-207ENST00000558500 HELQQ8TDG4 1101 aa7.7□□□□□ -1.18
LRRC28-207ENST00000558500 GPR152Q8TDT2 470 aa7.7□□□□□ -1.18
LRRC28-207ENST00000558500 RILPL2Q969X0 211 aa7.7□□□□□ -1.18
LRRC28-207ENST00000558500 RRP36Q96EU6 259 aaKnown RBP7.7□□□□□ -1.18
LRRC28-207ENST00000558500 IGSF21Q96ID5 467 aa7.7□□□□□ -1.18
LRRC28-207ENST00000558500 SDF4Q9BRK5 362 aa7.7□□□□□ -1.18
LRRC28-207ENST00000558500 RTKNQ9BST9 563 aa7.7□□□□□ -1.18
LRRC28-207ENST00000558500 SENP2Q9HC62 589 aa7.7□□□□□ -1.18
LRRC28-207ENST00000558500 ARHGEF3Q9NR81 526 aa7.7□□□□□ -1.18
LRRC28-207ENST00000558500 EPS15L1Q9UBC2 864 aa7.7□□□□□ -1.18
LRRC28-207ENST00000558500 CDV3Q9UKY7 258 aaKnown RBP7.7□□□□□ -1.18
LRRC28-207ENST00000558500 NFASCO94856 1347 aa7.7□□□□□ -1.18
LRRC28-207ENST00000558500 MYO10Q9HD67 2058 aa7.69□□□□□ -1.18
LRRC28-207ENST00000558500 CFAP47Q6ZTR5 3102 aa7.69□□□□□ -1.18
LRRC28-207ENST00000558500 ZFYVE26Q68DK2 2539 aa7.69□□□□□ -1.18
LRRC28-207ENST00000558500 A0A0U1RQF3 1178 aa7.69□□□□□ -1.18
LRRC28-207ENST00000558500 CARNS1A5YM72 827 aa7.69□□□□□ -1.18
LRRC28-207ENST00000558500 FAM205CA6NFA0 338 aa7.69□□□□□ -1.18
LRRC28-207ENST00000558500 ZBTB42B2RXF5 422 aa7.69□□□□□ -1.18
LRRC28-207ENST00000558500 BACH1O14867 736 aa7.69□□□□□ -1.18
LRRC28-207ENST00000558500 IFIT3O14879 490 aaKnown RBP7.69□□□□□ -1.18
LRRC28-207ENST00000558500 ZC3H11AO75152 810 aaKnown RBP eCLIP7.69□□□□□ -1.18
LRRC28-207ENST00000558500 C22orf31O95567 290 aa7.69□□□□□ -1.18
LRRC28-207ENST00000558500 VTNP04004 478 aa7.69□□□□□ -1.18
LRRC28-207ENST00000558500 NUDT7P0C024 238 aa7.69□□□□□ -1.18
LRRC28-207ENST00000558500 KLRC2P26717 231 aa7.69□□□□□ -1.18
LRRC28-207ENST00000558500 CLCN4P51793 760 aa7.69□□□□□ -1.18
LRRC28-207ENST00000558500 ITGB3BPQ13352 177 aaPredicted RBP7.69□□□□□ -1.18
LRRC28-207ENST00000558500 UBE2SQ16763 222 aa7.69□□□□□ -1.18
LRRC28-207ENST00000558500 DCLRE1AQ6PJP8 1040 aa7.69□□□□□ -1.18
LRRC28-207ENST00000558500 CWC27Q6UX04 472 aaKnown RBP7.69□□□□□ -1.18
LRRC28-207ENST00000558500 ABHD15Q6UXT9 468 aa7.69□□□□□ -1.18
LRRC28-207ENST00000558500 CMASQ8NFW8 434 aaPredicted RBP7.69□□□□□ -1.18
LRRC28-207ENST00000558500 PJA1Q8NG27 643 aa7.69□□□□□ -1.18
LRRC28-207ENST00000558500 BCL7CQ8WUZ0 217 aaPredicted RBP7.69□□□□□ -1.18
LRRC28-207ENST00000558500 STAMQ92783 540 aa7.69□□□□□ -1.18
LRRC28-207ENST00000558500 NXPE3Q969Y0 559 aa7.69□□□□□ -1.18
LRRC28-207ENST00000558500 KLHL5Q96PQ7 755 aa7.69□□□□□ -1.18
LRRC28-207ENST00000558500 MXRA8Q9BRK3 442 aa7.69□□□□□ -1.18
LRRC28-207ENST00000558500 VN1R3Q9BXE9 311 aa7.69□□□□□ -1.18
LRRC28-207ENST00000558500 SPZ1Q9BXG8 430 aa7.69□□□□□ -1.18
LRRC28-207ENST00000558500 EMILIN2Q9BXX0 1053 aa7.69□□□□□ -1.18
LRRC28-207ENST00000558500 FOXQ1Q9C009 403 aa7.69□□□□□ -1.18
LRRC28-207ENST00000558500 PSTPIP2Q9H939 334 aa7.69□□□□□ -1.18
LRRC28-207ENST00000558500 WDR6Q9NNW5 1121 aaKnown RBP7.69□□□□□ -1.18
LRRC28-207ENST00000558500 FBXO4Q9UKT5 387 aa7.69□□□□□ -1.18
LRRC28-207ENST00000558500 PCDHA6Q9UN73 950 aa7.69□□□□□ -1.18
LRRC28-207ENST00000558500 PCDHA8Q9Y5H6 950 aa7.69□□□□□ -1.18
LRRC28-207ENST00000558500 FAM208BQ5VWN6 2430 aa7.69□□□□□ -1.18
LRRC28-207ENST00000558500 ERICH2A1L162 156 aa7.68□□□□□ -1.18
LRRC28-207ENST00000558500 SPDYE3A6NKU9 549 aa7.68□□□□□ -1.18
LRRC28-207ENST00000558500 LRRN2O75325 713 aa7.68□□□□□ -1.18
LRRC28-207ENST00000558500 CCNE2O96020 404 aa7.68□□□□□ -1.18
LRRC28-207ENST00000558500 GALTP07902 379 aa7.68□□□□□ -1.18
LRRC28-207ENST00000558500 CNPP09543 421 aaKnown RBP7.68□□□□□ -1.18
LRRC28-207ENST00000558500 ATP4AP20648 1035 aa7.68□□□□□ -1.18
LRRC28-207ENST00000558500 TGM1P22735 817 aa7.68□□□□□ -1.18
LRRC28-207ENST00000558500 NLRP11P59045 1033 aaKnown RBP7.68□□□□□ -1.18
LRRC28-207ENST00000558500 STARD6P59095 220 aa7.68□□□□□ -1.18
LRRC28-207ENST00000558500 TRDNQ13061 729 aa7.68□□□□□ -1.18
LRRC28-207ENST00000558500 WTAPQ15007 396 aa7.68□□□□□ -1.18
LRRC28-207ENST00000558500 FAM160B1Q5W0V3 765 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms