RNA–Protein interactions for RNA: ENST00000558440.5

ZEB1-211, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 886 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-211ENST00000558440 CLTBP09497 229 aa7.28□□□□□ -1.24
ZEB1-211ENST00000558440 LMNB2Q03252 620 aa7.28□□□□□ -1.24
ZEB1-211ENST00000558440 TLE2Q04725 743 aa7.28□□□□□ -1.24
ZEB1-211ENST00000558440 PLS1Q14651 629 aa7.28□□□□□ -1.24
ZEB1-211ENST00000558440 SNX17Q15036 470 aa7.28□□□□□ -1.24
ZEB1-211ENST00000558440 LRRC41Q15345 812 aa7.28□□□□□ -1.24
ZEB1-211ENST00000558440 TNNI3KQ59H18 835 aa7.28□□□□□ -1.24
ZEB1-211ENST00000558440 DIEXFQ68CQ4 756 aaKnown RBP7.28□□□□□ -1.24
ZEB1-211ENST00000558440 ZSWIM9Q86XI8 627 aa7.28□□□□□ -1.24
ZEB1-211ENST00000558440 MIGA1Q8NAN2 632 aa7.28□□□□□ -1.24
ZEB1-211ENST00000558440 SHCBP1Q8NEM2 672 aa7.28□□□□□ -1.24
ZEB1-211ENST00000558440 ARHGAP45Q92619 1136 aa7.28□□□□□ -1.24
ZEB1-211ENST00000558440 TRIM43Q96BQ3 446 aaPredicted RBP7.28□□□□□ -1.24
ZEB1-211ENST00000558440 MOV10L1Q9BXT6 1211 aaKnown RBP7.28□□□□□ -1.24
ZEB1-211ENST00000558440 TANGO6Q9C0B7 1094 aa7.28□□□□□ -1.24
ZEB1-211ENST00000558440 GPR108Q9NPR9 543 aa7.28□□□□□ -1.24
ZEB1-211ENST00000558440 HOXC10Q9NYD6 342 aa7.28□□□□□ -1.24
ZEB1-211ENST00000558440 FPGT-TNNI3KV9GXZ4 949 aa7.28□□□□□ -1.24
ZEB1-211ENST00000558440 PNMA6EA0A0J9YXQ4 647 aa7.27□□□□□ -1.25
ZEB1-211ENST00000558440 MPHOSPH10O00566 681 aaKnown RBP7.27□□□□□ -1.25
ZEB1-211ENST00000558440 IPO8O15397 1037 aaKnown RBP7.27□□□□□ -1.25
ZEB1-211ENST00000558440 CILPO75339 1184 aa7.27□□□□□ -1.25
ZEB1-211ENST00000558440 RARBP10826 455 aa7.27□□□□□ -1.25
ZEB1-211ENST00000558440 RAG1P15918 1043 aa7.27□□□□□ -1.25
ZEB1-211ENST00000558440 ERCC3P19447 782 aa7.27□□□□□ -1.25
ZEB1-211ENST00000558440 ETV3P41162 512 aa7.27□□□□□ -1.25
ZEB1-211ENST00000558440 TAGLNQ01995 201 aaKnown RBP7.27□□□□□ -1.25
ZEB1-211ENST00000558440 FPGSQ05932 587 aa7.27□□□□□ -1.25
ZEB1-211ENST00000558440 TNK2Q07912 1038 aa7.27□□□□□ -1.25
ZEB1-211ENST00000558440 CAMK2GQ13555 558 aaPredicted RBP7.27□□□□□ -1.25
ZEB1-211ENST00000558440 COG2Q14746 738 aa7.27□□□□□ -1.25
ZEB1-211ENST00000558440 FAM47AQ5JRC9 791 aa7.27□□□□□ -1.25
ZEB1-211ENST00000558440 BNC2Q6ZN30 1099 aaPredicted RBP7.27□□□□□ -1.25
ZEB1-211ENST00000558440 RNF180Q86T96 592 aa7.27□□□□□ -1.25
ZEB1-211ENST00000558440 MAGEB6Q8N7X4 407 aa7.27□□□□□ -1.25
ZEB1-211ENST00000558440 MB21D1Q8N884 522 aa7.27□□□□□ -1.25
ZEB1-211ENST00000558440 DNAJB8Q8NHS0 232 aa7.27□□□□□ -1.25
ZEB1-211ENST00000558440 ZNF512BQ96KM6 892 aaPredicted RBP7.27□□□□□ -1.25
ZEB1-211ENST00000558440 RHOVQ96L33 236 aa7.27□□□□□ -1.25
ZEB1-211ENST00000558440 SPATC1LQ9H0A9 340 aa7.27□□□□□ -1.25
ZEB1-211ENST00000558440 MROH8Q9H579 483 aa7.27□□□□□ -1.25
ZEB1-211ENST00000558440 XPNPEP3Q9NQH7 507 aa7.27□□□□□ -1.25
ZEB1-211ENST00000558440 PIH1D3Q9NQM4 214 aaKnown RBP7.27□□□□□ -1.25
ZEB1-211ENST00000558440 CORINQ9Y5Q5 1042 aa7.27□□□□□ -1.25
ZEB1-211ENST00000558440 MYH4Q9Y623 1939 aa7.27□□□□□ -1.25
ZEB1-211ENST00000558440 HSFX4A0A1B0GTS1 333 aaPredicted RBP7.26□□□□□ -1.25
ZEB1-211ENST00000558440 HSFX3A0A1B0GWH4 333 aaPredicted RBP7.26□□□□□ -1.25
ZEB1-211ENST00000558440 FAM221AA4D161 298 aa7.26□□□□□ -1.25
ZEB1-211ENST00000558440 RBAK-RBAKDNI3L0D1 243 aa7.26□□□□□ -1.25
ZEB1-211ENST00000558440 PQBP1O60828 265 aaKnown RBP7.26□□□□□ -1.25
ZEB1-211ENST00000558440 BPNT1O95861 308 aa7.26□□□□□ -1.25
ZEB1-211ENST00000558440 FCER1AP12319 257 aa7.26□□□□□ -1.25
ZEB1-211ENST00000558440 SHMT1P34896 483 aa7.26□□□□□ -1.25
ZEB1-211ENST00000558440 RARSP54136 660 aaKnown RBP7.26□□□□□ -1.25
ZEB1-211ENST00000558440 MAP3K12Q12852 859 aa7.26□□□□□ -1.25
ZEB1-211ENST00000558440 SEPT2Q15019 361 aa7.26□□□□□ -1.25
ZEB1-211ENST00000558440 PRAMEF19Q5SWL8 479 aa7.26□□□□□ -1.25
ZEB1-211ENST00000558440 ZNF648Q5T619 568 aaPredicted RBP7.26□□□□□ -1.25
ZEB1-211ENST00000558440 TMED8Q6PL24 325 aaPredicted RBP7.26□□□□□ -1.25
ZEB1-211ENST00000558440 TRMT2AQ8IZ69 625 aaKnown RBP7.26□□□□□ -1.25
ZEB1-211ENST00000558440 ABRAQ8N0Z2 381 aa7.26□□□□□ -1.25
ZEB1-211ENST00000558440 PIWIL2Q8TC59 973 aaKnown RBP7.26□□□□□ -1.25
ZEB1-211ENST00000558440 UBE2FQ969M7 185 aa7.26□□□□□ -1.25
ZEB1-211ENST00000558440 MAML3Q96JK9 1138 aa7.26□□□□□ -1.25
ZEB1-211ENST00000558440 C19orf73Q9NVV2 129 aa7.26□□□□□ -1.25
ZEB1-211ENST00000558440 A0A1W2PQ45 241 aaPredicted RBP7.25□□□□□ -1.25
ZEB1-211ENST00000558440 A0A1W2PQY0 241 aa7.25□□□□□ -1.25
ZEB1-211ENST00000558440 KIAA0355O15063 1070 aa7.25□□□□□ -1.25
ZEB1-211ENST00000558440 SURF6O75683 361 aaKnown RBP7.25□□□□□ -1.25
ZEB1-211ENST00000558440 FLOT1O75955 427 aa7.25□□□□□ -1.25
ZEB1-211ENST00000558440 SLC25A27O95847 323 aa7.25□□□□□ -1.25
ZEB1-211ENST00000558440 PF4P02776 101 aa7.25□□□□□ -1.25
ZEB1-211ENST00000558440 ITGB8P26012 769 aa7.25□□□□□ -1.25
ZEB1-211ENST00000558440 GUCY1A2P33402 732 aa7.25□□□□□ -1.25
ZEB1-211ENST00000558440 AFMP43652 599 aa7.25□□□□□ -1.25
ZEB1-211ENST00000558440 PLCD1P51178 756 aa7.25□□□□□ -1.25
ZEB1-211ENST00000558440 EPHB4P54760 987 aa7.25□□□□□ -1.25
ZEB1-211ENST00000558440 KCNMB1Q16558 191 aa7.25□□□□□ -1.25
ZEB1-211ENST00000558440 TMEM201Q5SNT2 666 aa7.25□□□□□ -1.25
ZEB1-211ENST00000558440 CCDC174Q6PII3 467 aa7.25□□□□□ -1.25
ZEB1-211ENST00000558440 USP38Q8NB14 1042 aa7.25□□□□□ -1.25
ZEB1-211ENST00000558440 PPP1R13LQ8WUF5 828 aa7.25□□□□□ -1.25
ZEB1-211ENST00000558440 CYB5D2Q8WUJ1 264 aa7.25□□□□□ -1.25
ZEB1-211ENST00000558440 GATAD2BQ8WXI9 593 aa7.25□□□□□ -1.25
ZEB1-211ENST00000558440 FRAT1Q92837 279 aaPredicted RBP7.25□□□□□ -1.25
ZEB1-211ENST00000558440 TIFAQ96CG3 184 aa7.25□□□□□ -1.25
ZEB1-211ENST00000558440 TMEM74Q96NL1 305 aa7.25□□□□□ -1.25
ZEB1-211ENST00000558440 MMP19Q99542 508 aa7.25□□□□□ -1.25
ZEB1-211ENST00000558440 RSRP1Q9BUV0 290 aa7.25□□□□□ -1.25
ZEB1-211ENST00000558440 SH2D4AQ9H788 454 aa7.25□□□□□ -1.25
ZEB1-211ENST00000558440 ZSWIM5Q9P217 1185 aa7.25□□□□□ -1.25
ZEB1-211ENST00000558440 VTI1BQ9UEU0 232 aa7.25□□□□□ -1.25
ZEB1-211ENST00000558440 NRBP1Q9UHY1 535 aa7.25□□□□□ -1.25
ZEB1-211ENST00000558440 DBNLQ9UJU6 430 aaKnown RBP7.25□□□□□ -1.25
ZEB1-211ENST00000558440 CEP131Q9UPN4 1083 aa7.25□□□□□ -1.25
ZEB1-211ENST00000558440 ROBO3Q96MS0 1386 aa7.24□□□□□ -1.25
ZEB1-211ENST00000558440 A0A1W2PRG0 241 aa7.24□□□□□ -1.25
ZEB1-211ENST00000558440 ZNF503-AS2A6NEH8 195 aa7.24□□□□□ -1.25
ZEB1-211ENST00000558440 F13A1P00488 732 aa7.24□□□□□ -1.25
ZEB1-211ENST00000558440 PGK1P00558 417 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms