RNA–Protein interactions for RNA: ENST00000557442.5

HNRNPC-232, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2

Gene HNRNPC, Length 1,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-232ENST00000557442 CFAP45Q9UL16 551 aa11.76□□□□□ -0.53
HNRNPC-232ENST00000557442 ST3GAL5Q9UNP4 418 aa11.76□□□□□ -0.53
HNRNPC-232ENST00000557442 ZDHHC9Q9Y397 364 aa11.76□□□□□ -0.53
HNRNPC-232ENST00000557442 MORC2Q9Y6X9 1032 aaPredicted RBP11.76□□□□□ -0.53
HNRNPC-232ENST00000557442 CSDE1O75534 798 aaKnown RBP11.75□□□□□ -0.53
HNRNPC-232ENST00000557442 SSBP05455 408 aaKnown RBP eCLIP11.75□□□□□ -0.53
HNRNPC-232ENST00000557442 SRGAP2CP0DJJ0 459 aa11.75□□□□□ -0.53
HNRNPC-232ENST00000557442 CYP11B2P19099 503 aa11.75□□□□□ -0.53
HNRNPC-232ENST00000557442 PLCG1P19174 1290 aa11.75□□□□□ -0.53
HNRNPC-232ENST00000557442 SFPQP23246 707 aaKnown RBP eCLIP11.75□□□□□ -0.539e-7■■■□□ 16.4
HNRNPC-232ENST00000557442 DNAJB2P25686 324 aa11.75□□□□□ -0.53
HNRNPC-232ENST00000557442 RABGGTBP53611 331 aa11.75□□□□□ -0.53
HNRNPC-232ENST00000557442 TFDP1Q14186 410 aa11.75□□□□□ -0.53
HNRNPC-232ENST00000557442 FAM102BQ5T8I3 360 aa11.75□□□□□ -0.53
HNRNPC-232ENST00000557442 ATL3Q6DD88 541 aa11.75□□□□□ -0.53
HNRNPC-232ENST00000557442 USP49Q70CQ1 688 aa11.75□□□□□ -0.53
HNRNPC-232ENST00000557442 HERC6Q8IVU3 1022 aa11.75□□□□□ -0.53
HNRNPC-232ENST00000557442 RNF149Q8NC42 400 aa11.75□□□□□ -0.53
HNRNPC-232ENST00000557442 PHOSPHO2Q8TCD6 241 aa11.75□□□□□ -0.53
HNRNPC-232ENST00000557442 ASAP3Q8TDY4 903 aa11.75□□□□□ -0.53
HNRNPC-232ENST00000557442 EPSTI1Q96J88 318 aa11.75□□□□□ -0.53
HNRNPC-232ENST00000557442 CCSER1Q9C0I3 900 aa11.75□□□□□ -0.53
HNRNPC-232ENST00000557442 ATP6V1DQ9Y5K8 247 aa11.75□□□□□ -0.53
HNRNPC-232ENST00000557442 COL4A6Q14031 1691 aa11.75□□□□□ -0.53
HNRNPC-232ENST00000557442 PDCD11Q14690 1871 aaKnown RBP11.75□□□□□ -0.53
HNRNPC-232ENST00000557442 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.74□□□□□ -0.53
HNRNPC-232ENST00000557442 DENND3A2RUS2 1198 aa11.74□□□□□ -0.53
HNRNPC-232ENST00000557442 ASAP2O43150 1006 aa11.74□□□□□ -0.53
HNRNPC-232ENST00000557442 PPP6R2O75170 966 aa11.74□□□□□ -0.53
HNRNPC-232ENST00000557442 IBSPP21815 317 aaPredicted RBP11.74□□□□□ -0.53
HNRNPC-232ENST00000557442 FGFR4P22455 802 aa11.74□□□□□ -0.53
HNRNPC-232ENST00000557442 GLRA2P23416 452 aa11.74□□□□□ -0.53
HNRNPC-232ENST00000557442 ARL2P36404 184 aa11.74□□□□□ -0.53
HNRNPC-232ENST00000557442 PBX2P40425 430 aa11.74□□□□□ -0.53
HNRNPC-232ENST00000557442 PHKA2P46019 1235 aa11.74□□□□□ -0.53
HNRNPC-232ENST00000557442 KRT85P78386 507 aa11.74□□□□□ -0.53
HNRNPC-232ENST00000557442 CAPSQ13938 189 aa11.74□□□□□ -0.53
HNRNPC-232ENST00000557442 RAB30Q15771 203 aa11.74□□□□□ -0.53
HNRNPC-232ENST00000557442 FAM117BQ6P1L5 589 aa11.74□□□□□ -0.53
HNRNPC-232ENST00000557442 KCTD17Q8N5Z5 321 aa11.74□□□□□ -0.53
HNRNPC-232ENST00000557442 KCNG4Q8TDN1 519 aa11.74□□□□□ -0.53
HNRNPC-232ENST00000557442 LINC01599Q8WXQ3 324 aa11.74□□□□□ -0.53
HNRNPC-232ENST00000557442 ZBED2Q9BTP6 218 aa11.74□□□□□ -0.53
HNRNPC-232ENST00000557442 RUSC1Q9BVN2 902 aa11.74□□□□□ -0.53
HNRNPC-232ENST00000557442 PBX4Q9BYU1 374 aa11.74□□□□□ -0.53
HNRNPC-232ENST00000557442 INO80BQ9C086 356 aaPredicted RBP11.74□□□□□ -0.53
HNRNPC-232ENST00000557442 TMX1Q9H3N1 280 aa11.74□□□□□ -0.53
HNRNPC-232ENST00000557442 IFT122Q9HBG6 1241 aa11.74□□□□□ -0.53
HNRNPC-232ENST00000557442 CCDC39Q9UFE4 941 aa11.74□□□□□ -0.53
HNRNPC-232ENST00000557442 PLXNA4Q9HCM2 1894 aa11.74□□□□□ -0.53
HNRNPC-232ENST00000557442 LRRIQ4A6NIV6 560 aa11.73□□□□□ -0.53
HNRNPC-232ENST00000557442 TLL1O43897 1013 aa11.73□□□□□ -0.53
HNRNPC-232ENST00000557442 MGEA5O60502 916 aa11.73□□□□□ -0.53
HNRNPC-232ENST00000557442 UPP2O95045 317 aa11.73□□□□□ -0.53
HNRNPC-232ENST00000557442 GJB5O95377 273 aa11.73□□□□□ -0.53
HNRNPC-232ENST00000557442 PLA2G4BP0C869 781 aa11.73□□□□□ -0.53
HNRNPC-232ENST00000557442 ME1P48163 572 aa11.73□□□□□ -0.53
HNRNPC-232ENST00000557442 NUCB2P80303 420 aa11.73□□□□□ -0.53
HNRNPC-232ENST00000557442 DHX8Q14562 1220 aaKnown RBP11.73□□□□□ -0.53
HNRNPC-232ENST00000557442 CATSPER4Q7RTX7 472 aa11.73□□□□□ -0.53
HNRNPC-232ENST00000557442 SRGAP1Q7Z6B7 1085 aa11.73□□□□□ -0.53
HNRNPC-232ENST00000557442 KIFAP3Q92845 792 aa11.73□□□□□ -0.53
HNRNPC-232ENST00000557442 TIFAQ96CG3 184 aa11.73□□□□□ -0.53
HNRNPC-232ENST00000557442 CHAMP1Q96JM3 812 aa11.73□□□□□ -0.53
HNRNPC-232ENST00000557442 ADAM2Q99965 735 aa11.73□□□□□ -0.53
HNRNPC-232ENST00000557442 TSPYL2Q9H2G4 693 aaPredicted RBP11.73□□□□□ -0.53
HNRNPC-232ENST00000557442 MSRAQ9UJ68 235 aa11.73□□□□□ -0.53
HNRNPC-232ENST00000557442 PCDHA11Q9Y5I1 949 aa11.73□□□□□ -0.53
HNRNPC-232ENST00000557442 INO80B-WBP1J3KQ70 363 aa11.72□□□□□ -0.53
HNRNPC-232ENST00000557442 ENPP3O14638 875 aa11.72□□□□□ -0.53
HNRNPC-232ENST00000557442 CUTAO60888 179 aa11.72□□□□□ -0.53
HNRNPC-232ENST00000557442 HIP1RO75146 1068 aa11.72□□□□□ -0.53
HNRNPC-232ENST00000557442 ERLIN2O94905 339 aa11.72□□□□□ -0.53
HNRNPC-232ENST00000557442 MYOGP15173 224 aa11.72□□□□□ -0.53
HNRNPC-232ENST00000557442 ZSCAN20P17040 1043 aaPredicted RBP11.72□□□□□ -0.53
HNRNPC-232ENST00000557442 DDIT3P35638 169 aa11.72□□□□□ -0.53
HNRNPC-232ENST00000557442 SLC12A3P55017 1021 aa11.72□□□□□ -0.53
HNRNPC-232ENST00000557442 PTENP60484 403 aa11.72□□□□□ -0.53
HNRNPC-232ENST00000557442 RAD51AP2Q09MP3 1159 aa11.72□□□□□ -0.53
HNRNPC-232ENST00000557442 PPP2R5AQ15172 486 aa11.72□□□□□ -0.53
HNRNPC-232ENST00000557442 ZNF697Q5TEC3 545 aa11.72□□□□□ -0.53
HNRNPC-232ENST00000557442 RINT1Q6NUQ1 792 aa11.72□□□□□ -0.53
HNRNPC-232ENST00000557442 GPBP1Q86WP2 473 aa11.72□□□□□ -0.53
HNRNPC-232ENST00000557442 SYT2Q8N9I0 419 aaPredicted RBP11.72□□□□□ -0.53
HNRNPC-232ENST00000557442 LRRC15Q8TF66 581 aa11.72□□□□□ -0.53
HNRNPC-232ENST00000557442 BSNDQ8WZ55 320 aa11.72□□□□□ -0.53
HNRNPC-232ENST00000557442 LARP4BQ92615 738 aaKnown RBP11.72□□□□□ -0.53
HNRNPC-232ENST00000557442 RAD54LQ92698 747 aa11.72□□□□□ -0.53
HNRNPC-232ENST00000557442 IFT74Q96LB3 600 aa11.72□□□□□ -0.53
HNRNPC-232ENST00000557442 SPATA32Q96LK8 384 aa11.72□□□□□ -0.53
HNRNPC-232ENST00000557442 DRC1Q96MC2 740 aa11.72□□□□□ -0.53
HNRNPC-232ENST00000557442 MINDY3Q9H8M7 445 aa11.72□□□□□ -0.53
HNRNPC-232ENST00000557442 POLD4Q9HCU8 107 aa11.72□□□□□ -0.53
HNRNPC-232ENST00000557442 C1orf112Q9NSG2 853 aa11.72□□□□□ -0.53
HNRNPC-232ENST00000557442 BLOC1S4Q9NUP1 217 aa11.72□□□□□ -0.53
HNRNPC-232ENST00000557442 STK17AQ9UEE5 414 aa11.72□□□□□ -0.53
HNRNPC-232ENST00000557442 PIN4Q9Y237 131 aaKnown RBP11.72□□□□□ -0.53
HNRNPC-232ENST00000557442 YBX2Q9Y2T7 364 aaKnown RBP11.72□□□□□ -0.53
HNRNPC-232ENST00000557442 CA3P07451 260 aa11.71□□□□□ -0.53
HNRNPC-232ENST00000557442 GUCY2CP25092 1073 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms