RNA–Protein interactions for RNA: ENST00000557143.1

KLC1-222, Transcript of kinesin light chain 1, human

TSL 2

Gene KLC1, Length 701 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KLC1-222	ENST00000557143	GPC3	P51654	580 aa		13.51	□□□□□ -0.25
KLC1-222	ENST00000557143	PARP9	Q8IXQ6	854 aa		13.51	□□□□□ -0.25
KLC1-222	ENST00000557143	TMEM143	Q96AN5	459 aa		13.51	□□□□□ -0.25
KLC1-222	ENST00000557143	YME1L1	Q96TA2	773 aa		13.51	□□□□□ -0.25
KLC1-222	ENST00000557143	PHOX2B	Q99453	314 aa		13.51	□□□□□ -0.25
KLC1-222	ENST00000557143	NAP1L4	Q99733	375 aa	Known RBP	13.51	□□□□□ -0.25
KLC1-222	ENST00000557143	ADAM2	Q99965	735 aa		13.51	□□□□□ -0.25
KLC1-222	ENST00000557143	HSD17B14	Q9BPX1	270 aa		13.51	□□□□□ -0.25
KLC1-222	ENST00000557143	CYP26B1	Q9NR63	512 aa		13.51	□□□□□ -0.25
KLC1-222	ENST00000557143	CEP131	Q9UPN4	1083 aa		13.51	□□□□□ -0.25
KLC1-222	ENST00000557143	VPS9D1	Q9Y2B5	631 aa		13.51	□□□□□ -0.25
KLC1-222	ENST00000557143	INSL6	Q9Y581	213 aa		13.51	□□□□□ -0.25
KLC1-222	ENST00000557143	PCDHB6	Q9Y5E3	794 aa		13.51	□□□□□ -0.25
KLC1-222	ENST00000557143	MTCH2	Q9Y6C9	303 aa		13.51	□□□□□ -0.25
KLC1-222	ENST00000557143	SPATA31C1	P0DKV0	1188 aa		13.5	□□□□□ -0.25
KLC1-222	ENST00000557143	U2AF2	P26368	475 aa	Known RBP eCLIP	13.5	□□□□□ -0.25	2e-9	■□□□□ 11.2
KLC1-222	ENST00000557143	CLCN1	P35523	988 aa		13.5	□□□□□ -0.25
KLC1-222	ENST00000557143	TEC	P42680	631 aa		13.5	□□□□□ -0.25
KLC1-222	ENST00000557143	ERVK-21	P61565	698 aa		13.5	□□□□□ -0.25
KLC1-222	ENST00000557143	DSC3	Q14574	896 aa		13.5	□□□□□ -0.25
KLC1-222	ENST00000557143	IL17A	Q16552	155 aa		13.5	□□□□□ -0.25
KLC1-222	ENST00000557143	TTC38	Q5R3I4	469 aa		13.5	□□□□□ -0.25
KLC1-222	ENST00000557143	NUDT18	Q6ZVK8	323 aa		13.5	□□□□□ -0.25
KLC1-222	ENST00000557143	SLFN12	Q8IYM2	578 aa		13.5	□□□□□ -0.25
KLC1-222	ENST00000557143	PIGO	Q8TEQ8	1089 aa		13.5	□□□□□ -0.25
KLC1-222	ENST00000557143	CEP170P1	Q96L14	293 aa		13.5	□□□□□ -0.25
KLC1-222	ENST00000557143	TGS1	Q96RS0	853 aa	Known RBP	13.5	□□□□□ -0.25
KLC1-222	ENST00000557143	KIAA1468	Q9P260	1216 aa		13.5	□□□□□ -0.25
KLC1-222	ENST00000557143	SUCLA2	Q9P2R7	463 aa	Predicted RBP	13.5	□□□□□ -0.25
KLC1-222	ENST00000557143	HCST	Q9UBK5	93 aa		13.5	□□□□□ -0.25
KLC1-222	ENST00000557143	SQOR	Q9Y6N5	450 aa		13.5	□□□□□ -0.25
KLC1-222	ENST00000557143	GBF1	Q92538	1859 aa		13.49	□□□□□ -0.25
KLC1-222	ENST00000557143	SI	P14410	1827 aa		13.49	□□□□□ -0.25
KLC1-222	ENST00000557143		A0A087WZ62	844 aa		13.49	□□□□□ -0.25
KLC1-222	ENST00000557143	MED24	O75448	989 aa		13.49	□□□□□ -0.25
KLC1-222	ENST00000557143	YWHAB	P31946	246 aa	Known RBP	13.49	□□□□□ -0.25
KLC1-222	ENST00000557143	LSM11	P83369	360 aa	Known RBP eCLIP	13.49	□□□□□ -0.25
KLC1-222	ENST00000557143	GNL2	Q13823	731 aa	Known RBP	13.49	□□□□□ -0.25
KLC1-222	ENST00000557143	PAN2	Q504Q3	1202 aa	Known RBP	13.49	□□□□□ -0.25
KLC1-222	ENST00000557143	XKR9	Q5GH70	373 aa		13.49	□□□□□ -0.25
KLC1-222	ENST00000557143	FAM102B	Q5T8I3	360 aa		13.49	□□□□□ -0.25
KLC1-222	ENST00000557143	RHPN2	Q8IUC4	686 aa		13.49	□□□□□ -0.25
KLC1-222	ENST00000557143	C4orf19	Q8IY42	314 aa		13.49	□□□□□ -0.25
KLC1-222	ENST00000557143	PRPF31	Q8WWY3	499 aa	Known RBP	13.49	□□□□□ -0.25
KLC1-222	ENST00000557143	ZNF689	Q96CS4	500 aa	Predicted RBP	13.49	□□□□□ -0.25
KLC1-222	ENST00000557143	MAP7D2	Q96T17	732 aa		13.49	□□□□□ -0.25
KLC1-222	ENST00000557143	FDXACB1	Q9BRP7	624 aa	Predicted RBP	13.49	□□□□□ -0.25
KLC1-222	ENST00000557143	RC3H2	Q9HBD1	1191 aa	Known RBP	13.49	□□□□□ -0.25
KLC1-222	ENST00000557143	XIRP2	A4UGR9	3374 aa		13.49	□□□□□ -0.25
KLC1-222	ENST00000557143	DGKI	O75912	1065 aa		13.48	□□□□□ -0.25
KLC1-222	ENST00000557143	DARS	P14868	501 aa	Known RBP	13.48	□□□□□ -0.25
KLC1-222	ENST00000557143	EIF4B	P23588	611 aa	Known RBP	13.48	□□□□□ -0.25
KLC1-222	ENST00000557143	TMOD1	P28289	359 aa		13.48	□□□□□ -0.25
KLC1-222	ENST00000557143	ECM1	Q16610	540 aa		13.48	□□□□□ -0.25
KLC1-222	ENST00000557143	EPC2	Q52LR7	807 aa		13.48	□□□□□ -0.25
KLC1-222	ENST00000557143	MCTP1	Q6DN14	999 aa		13.48	□□□□□ -0.25
KLC1-222	ENST00000557143	PHF6	Q8IWS0	365 aa	Known RBP eCLIP	13.48	□□□□□ -0.25
KLC1-222	ENST00000557143	NLRP7	Q8WX94	980 aa		13.48	□□□□□ -0.25
KLC1-222	ENST00000557143	KDM4C	Q9H3R0	1056 aa		13.48	□□□□□ -0.25
KLC1-222	ENST00000557143	DHX33	Q9H6R0	707 aa	Known RBP	13.48	□□□□□ -0.25
KLC1-222	ENST00000557143	ZSWIM4	Q9H7M6	989 aa		13.48	□□□□□ -0.25
KLC1-222	ENST00000557143	POLD4	Q9HCU8	107 aa		13.48	□□□□□ -0.25
KLC1-222	ENST00000557143	XPNPEP1	Q9NQW7	623 aa		13.48	□□□□□ -0.25
KLC1-222	ENST00000557143	RGS18	Q9NS28	235 aa		13.48	□□□□□ -0.25
KLC1-222	ENST00000557143	DENND3	A2RUS2	1198 aa		13.47	□□□□□ -0.25
KLC1-222	ENST00000557143	PP2D1	A8MPX8	630 aa		13.47	□□□□□ -0.25
KLC1-222	ENST00000557143		C9IYK1	514 aa		13.47	□□□□□ -0.25
KLC1-222	ENST00000557143	GPR182	O15218	404 aa		13.47	□□□□□ -0.25
KLC1-222	ENST00000557143	CSPG5	O95196	566 aa		13.47	□□□□□ -0.25
KLC1-222	ENST00000557143	RPLP2	P05387	115 aa	Known RBP	13.47	□□□□□ -0.25
KLC1-222	ENST00000557143	OR52Z1	P0C646	297 aa		13.47	□□□□□ -0.25
KLC1-222	ENST00000557143	SRGAP2C	P0DJJ0	459 aa		13.47	□□□□□ -0.25
KLC1-222	ENST00000557143	FGFR1	P11362	822 aa		13.47	□□□□□ -0.25
KLC1-222	ENST00000557143	FAM189B	P81408	668 aa		13.47	□□□□□ -0.25
KLC1-222	ENST00000557143	LONRF3	Q496Y0	759 aa		13.47	□□□□□ -0.25
KLC1-222	ENST00000557143	CATSPER3	Q86XQ3	398 aa		13.47	□□□□□ -0.25
KLC1-222	ENST00000557143	TMEM192	Q8IY95	271 aa		13.47	□□□□□ -0.25
KLC1-222	ENST00000557143	NLRP4	Q96MN2	994 aa		13.47	□□□□□ -0.25
KLC1-222	ENST00000557143	SCLT1	Q96NL6	688 aa		13.47	□□□□□ -0.25
KLC1-222	ENST00000557143	TMUB1	Q9BVT8	246 aa		13.47	□□□□□ -0.25
KLC1-222	ENST00000557143	MINDY3	Q9H8M7	445 aa		13.47	□□□□□ -0.25
KLC1-222	ENST00000557143	RNF19A	Q9NV58	838 aa		13.47	□□□□□ -0.25
KLC1-222	ENST00000557143	DAXX	Q9UER7	740 aa	Predicted RBP	13.47	□□□□□ -0.25
KLC1-222	ENST00000557143	SMC3	Q9UQE7	1217 aa		13.47	□□□□□ -0.25
KLC1-222	ENST00000557143	MRPL42	Q9Y6G3	142 aa	Known RBP	13.47	□□□□□ -0.25
KLC1-222	ENST00000557143	COL4A6	Q14031	1691 aa		13.47	□□□□□ -0.25
KLC1-222	ENST00000557143	POU3F3	P20264	500 aa	Predicted RBP	13.46	□□□□□ -0.25
KLC1-222	ENST00000557143	CDC25A	P30304	524 aa		13.46	□□□□□ -0.25
KLC1-222	ENST00000557143	SARS	P49591	514 aa	Known RBP	13.46	□□□□□ -0.25
KLC1-222	ENST00000557143	POLG	P54098	1239 aa	Predicted RBP	13.46	□□□□□ -0.25
KLC1-222	ENST00000557143	CUL4A	Q13619	759 aa		13.46	□□□□□ -0.25
KLC1-222	ENST00000557143	BTG3	Q14201	252 aa	Predicted RBP	13.46	□□□□□ -0.25
KLC1-222	ENST00000557143	POTEG	Q6S5H5	508 aa		13.46	□□□□□ -0.25
KLC1-222	ENST00000557143	MAEA	Q7L5Y9	396 aa		13.46	□□□□□ -0.25
KLC1-222	ENST00000557143	NPAS4	Q8IUM7	802 aa		13.46	□□□□□ -0.25
KLC1-222	ENST00000557143	FIBCD1	Q8N539	461 aa		13.46	□□□□□ -0.25
KLC1-222	ENST00000557143	ASAP3	Q8TDY4	903 aa		13.46	□□□□□ -0.25
KLC1-222	ENST00000557143	FTHL17	Q9BXU8	183 aa		13.46	□□□□□ -0.25
KLC1-222	ENST00000557143	IFT122	Q9HBG6	1241 aa		13.46	□□□□□ -0.25
KLC1-222	ENST00000557143	GPRC5C	Q9NQ84	441 aa		13.46	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 33 ms