RNA–Protein interactions for RNA: ENST00000556992.1

SRP54-212, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-212ENST00000556992 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.27□□□□□ -1.57
SRP54-212ENST00000556992 PDRG1Q9NUG6 133 aa5.27□□□□□ -1.57
SRP54-212ENST00000556992 CTNNA3Q9UI47 895 aa5.27□□□□□ -1.57
SRP54-212ENST00000556992 ST6GALNAC2Q9UJ37 374 aa5.27□□□□□ -1.57
SRP54-212ENST00000556992 CCNL1Q9UK58 526 aaPredicted RBP5.27□□□□□ -1.57
SRP54-212ENST00000556992 CNOT11Q9UKZ1 510 aaKnown RBP5.27□□□□□ -1.57
SRP54-212ENST00000556992 RBM8AQ9Y5S9 174 aaKnown RBP5.27□□□□□ -1.57
SRP54-212ENST00000556992 RFX7Q2KHR2 1363 aa5.27□□□□□ -1.57
SRP54-212ENST00000556992 UBN2Q6ZU65 1347 aa5.26□□□□□ -1.57
SRP54-212ENST00000556992 LTBP3Q9NS15 1303 aa5.26□□□□□ -1.57
SRP54-212ENST00000556992 PKD1L3Q7Z443 1732 aa5.26□□□□□ -1.57
SRP54-212ENST00000556992 SLC27A2O14975 620 aa5.26□□□□□ -1.57
SRP54-212ENST00000556992 NTSR2O95665 410 aa5.26□□□□□ -1.57
SRP54-212ENST00000556992 C8BP07358 591 aa5.26□□□□□ -1.57
SRP54-212ENST00000556992 SLC5A1P13866 664 aa5.26□□□□□ -1.57
SRP54-212ENST00000556992 RFC4P35249 363 aa5.26□□□□□ -1.57
SRP54-212ENST00000556992 CACNB2Q08289 660 aaPredicted RBP5.26□□□□□ -1.57
SRP54-212ENST00000556992 CUL4AQ13619 759 aa5.26□□□□□ -1.57
SRP54-212ENST00000556992 MRPL58Q14197 206 aaKnown RBP5.26□□□□□ -1.57
SRP54-212ENST00000556992 CCDC81Q6ZN84 652 aa5.26□□□□□ -1.57
SRP54-212ENST00000556992 DDX46Q7L014 1031 aaKnown RBP5.26□□□□□ -1.57
SRP54-212ENST00000556992 RUFY3Q7L099 469 aa5.26□□□□□ -1.57
SRP54-212ENST00000556992 LIMS2Q7Z4I7 341 aa5.26□□□□□ -1.57
SRP54-212ENST00000556992 CABP7Q86V35 215 aa5.26□□□□□ -1.57
SRP54-212ENST00000556992 FAM26EQ8N5C1 309 aa5.26□□□□□ -1.57
SRP54-212ENST00000556992 RGS22Q8NE09 1264 aa5.26□□□□□ -1.57
SRP54-212ENST00000556992 NLGN2Q8NFZ4 835 aa5.26□□□□□ -1.57
SRP54-212ENST00000556992 JAKMIP1Q96N16 626 aaKnown RBP5.26□□□□□ -1.57
SRP54-212ENST00000556992 GORASP1Q9BQQ3 440 aa5.26□□□□□ -1.57
SRP54-212ENST00000556992 UPF3BQ9BZI7 483 aaKnown RBP5.26□□□□□ -1.57
SRP54-212ENST00000556992 GNL3LQ9NVN8 582 aaKnown RBP5.26□□□□□ -1.57
SRP54-212ENST00000556992 PCDHB10Q9UN67 800 aa5.26□□□□□ -1.57
SRP54-212ENST00000556992 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.26□□□□□ -1.57
SRP54-212ENST00000556992 PCDHGB7Q9Y5F8 929 aa5.26□□□□□ -1.57
SRP54-212ENST00000556992 RTL9Q8NET4 1388 aa5.26□□□□□ -1.57
SRP54-212ENST00000556992 ABCC12Q96J65 1359 aa5.26□□□□□ -1.57
SRP54-212ENST00000556992 CRYBG1Q9Y4K1 1723 aa5.26□□□□□ -1.57
SRP54-212ENST00000556992 A0A0D9SFI3 127 aa5.25□□□□□ -1.57
SRP54-212ENST00000556992 AURKAO14965 403 aa5.25□□□□□ -1.57
SRP54-212ENST00000556992 SUV39H1O43463 412 aa5.25□□□□□ -1.57
SRP54-212ENST00000556992 CASTP20810 708 aaKnown RBP5.25□□□□□ -1.57
SRP54-212ENST00000556992 FGFR2P21802 821 aa5.25□□□□□ -1.57
SRP54-212ENST00000556992 ADORA1P30542 326 aa5.25□□□□□ -1.57
SRP54-212ENST00000556992 ZNF394Q53GI3 561 aa5.25□□□□□ -1.57
SRP54-212ENST00000556992 CPZQ66K79 652 aa5.25□□□□□ -1.57
SRP54-212ENST00000556992 RCSD1Q6JBY9 416 aa5.25□□□□□ -1.57
SRP54-212ENST00000556992 BLOC1S2Q6QNY1 142 aa5.25□□□□□ -1.57
SRP54-212ENST00000556992 NBPF5PQ86XG9 351 aaPredicted RBP5.25□□□□□ -1.57
SRP54-212ENST00000556992 ANKRD18AQ8IVF6 992 aa5.25□□□□□ -1.57
SRP54-212ENST00000556992 VGLL2Q8N8G2 317 aa5.25□□□□□ -1.57
SRP54-212ENST00000556992 USP33Q8TEY7 942 aa5.25□□□□□ -1.57
SRP54-212ENST00000556992 GIPC2Q8TF65 315 aa5.25□□□□□ -1.57
SRP54-212ENST00000556992 TNPO1Q92973 898 aaKnown RBP5.25□□□□□ -1.57
SRP54-212ENST00000556992 EDC3Q96F86 508 aaKnown RBP5.25□□□□□ -1.57
SRP54-212ENST00000556992 FGD4Q96M96 766 aa5.25□□□□□ -1.57
SRP54-212ENST00000556992 TTC14Q96N46 770 aa5.25□□□□□ -1.57
SRP54-212ENST00000556992 TM9SF2Q99805 663 aa5.25□□□□□ -1.57
SRP54-212ENST00000556992 MTA3Q9BTC8 594 aa5.25□□□□□ -1.57
SRP54-212ENST00000556992 ANKRD2Q9GZV1 360 aa5.25□□□□□ -1.57
SRP54-212ENST00000556992 IL25Q9H293 177 aa5.25□□□□□ -1.57
SRP54-212ENST00000556992 INVSQ9Y283 1065 aa5.25□□□□□ -1.57
SRP54-212ENST00000556992 PARP4Q9UKK3 1724 aaKnown RBP5.25□□□□□ -1.57
SRP54-212ENST00000556992 IGSF3O75054 1194 aa5.24□□□□□ -1.57
SRP54-212ENST00000556992 PLATP00750 562 aa5.24□□□□□ -1.57
SRP54-212ENST00000556992 NTRK1P04629 796 aa5.24□□□□□ -1.57
SRP54-212ENST00000556992 RPS6KB1P23443 525 aa5.24□□□□□ -1.57
SRP54-212ENST00000556992 GUCY2CP25092 1073 aa5.24□□□□□ -1.57
SRP54-212ENST00000556992 AK2P54819 239 aa5.24□□□□□ -1.57
SRP54-212ENST00000556992 RPS8P62241 208 aaKnown RBP5.24□□□□□ -1.57
SRP54-212ENST00000556992 MAP3K12Q12852 859 aa5.24□□□□□ -1.57
SRP54-212ENST00000556992 UBE4AQ14139 1066 aa5.24□□□□□ -1.57
SRP54-212ENST00000556992 UBE3CQ15386 1083 aa5.24□□□□□ -1.57
SRP54-212ENST00000556992 CAVIN4Q5BKX8 364 aa5.24□□□□□ -1.57
SRP54-212ENST00000556992 SLC9C2Q5TAH2 1124 aa5.24□□□□□ -1.57
SRP54-212ENST00000556992 TBC1D9BQ66K14 1250 aa5.24□□□□□ -1.57
SRP54-212ENST00000556992 WWC2Q6AWC2 1192 aa5.24□□□□□ -1.57
SRP54-212ENST00000556992 MCTP2Q6DN12 878 aa5.24□□□□□ -1.57
SRP54-212ENST00000556992 TMED8Q6PL24 325 aaPredicted RBP5.24□□□□□ -1.57
SRP54-212ENST00000556992 PTF1AQ7RTS3 328 aa5.24□□□□□ -1.57
SRP54-212ENST00000556992 KRT27Q7Z3Y8 459 aa5.24□□□□□ -1.57
SRP54-212ENST00000556992 SPRED1Q7Z699 444 aa5.24□□□□□ -1.57
SRP54-212ENST00000556992 SPATA5Q8NB90 893 aa5.24□□□□□ -1.57
SRP54-212ENST00000556992 PEX11GQ96HA9 241 aa5.24□□□□□ -1.57
SRP54-212ENST00000556992 NEK1Q96PY6 1258 aa5.24□□□□□ -1.57
SRP54-212ENST00000556992 ZNF214Q9UL59 606 aaPredicted RBP5.24□□□□□ -1.57
SRP54-212ENST00000556992 RGPD2P0DJD1 1756 aa5.24□□□□□ -1.57
SRP54-212ENST00000556992 NPHP1O15259 732 aa5.23□□□□□ -1.57
SRP54-212ENST00000556992 FUCA1P04066 466 aa5.23□□□□□ -1.57
SRP54-212ENST00000556992 CYP2C8P10632 490 aa5.23□□□□□ -1.57
SRP54-212ENST00000556992 HSPD1P10809 573 aaKnown RBP5.23□□□□□ -1.57
SRP54-212ENST00000556992 PDCP20941 246 aa5.23□□□□□ -1.57
SRP54-212ENST00000556992 SEPHS1P49903 392 aa5.23□□□□□ -1.57
SRP54-212ENST00000556992 CHRNDQ07001 517 aa5.23□□□□□ -1.57
SRP54-212ENST00000556992 TCEAL1Q15170 157 aa5.23□□□□□ -1.57
SRP54-212ENST00000556992 IMMTQ16891 758 aaKnown RBP5.23□□□□□ -1.57
SRP54-212ENST00000556992 ADCK5Q3MIX3 580 aa5.23□□□□□ -1.57
SRP54-212ENST00000556992 LDLRAD1Q5T700 205 aa5.23□□□□□ -1.57
SRP54-212ENST00000556992 EEF1DP3Q658K8 133 aa5.23□□□□□ -1.57
SRP54-212ENST00000556992 MBLAC2Q68D91 279 aa5.23□□□□□ -1.57
SRP54-212ENST00000556992 ADAT2Q7Z6V5 191 aaKnown RBP5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms