RNA–Protein interactions for RNA: ENST00000556013.2

PTCSC3-201, Transcript of papillary thyroid carcinoma susceptibility candidate 3, humanhuman

TSL 1 (best) BASIC

Gene PTCSC3, Length 571 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCSC3-201ENST00000556013 SRGAP1Q7Z6B7 1085 aa8.74□□□□□ -1.01
PTCSC3-201ENST00000556013 LRRC71Q8N4P6 559 aa8.74□□□□□ -1.01
PTCSC3-201ENST00000556013 SUSD6Q92537 303 aa8.74□□□□□ -1.01
PTCSC3-201ENST00000556013 ZNF558Q96NG5 402 aa8.74□□□□□ -1.01
PTCSC3-201ENST00000556013 PHF7Q9BWX1 381 aaPredicted RBP8.74□□□□□ -1.01
PTCSC3-201ENST00000556013 RNF19AQ9NV58 838 aa8.74□□□□□ -1.01
PTCSC3-201ENST00000556013 SPG21Q9NZD8 308 aa8.74□□□□□ -1.01
PTCSC3-201ENST00000556013 IRAK3Q9Y616 596 aa8.74□□□□□ -1.01
PTCSC3-201ENST00000556013 DDX11L8A8MPP1 907 aa8.73□□□□□ -1.01
PTCSC3-201ENST00000556013 LOC730098B7Z3J9 87 aa8.73□□□□□ -1.01
PTCSC3-201ENST00000556013 RBAK-RBAKDNI3L0D1 243 aa8.73□□□□□ -1.01
PTCSC3-201ENST00000556013 CHMP2AO43633 222 aa8.73□□□□□ -1.01
PTCSC3-201ENST00000556013 PPFIA3O75145 1194 aa8.73□□□□□ -1.01
PTCSC3-201ENST00000556013 BAG4O95429 457 aaKnown RBP8.73□□□□□ -1.01
PTCSC3-201ENST00000556013 XRCC6P12956 609 aaKnown RBP eCLIP8.73□□□□□ -1.01
PTCSC3-201ENST00000556013 GTF2F1P35269 517 aaKnown RBP eCLIP8.73□□□□□ -1.01
PTCSC3-201ENST00000556013 RFC5P40937 340 aa8.73□□□□□ -1.01
PTCSC3-201ENST00000556013 PHKA2P46019 1235 aa8.73□□□□□ -1.01
PTCSC3-201ENST00000556013 ALDH7A1P49419 539 aaKnown RBP8.73□□□□□ -1.01
PTCSC3-201ENST00000556013 POLGP54098 1239 aaPredicted RBP8.73□□□□□ -1.01
PTCSC3-201ENST00000556013 UGCGQ16739 394 aa8.73□□□□□ -1.01
PTCSC3-201ENST00000556013 INF2Q27J81 1249 aa8.73□□□□□ -1.01
PTCSC3-201ENST00000556013 LETM2Q2VYF4 491 aa8.73□□□□□ -1.01
PTCSC3-201ENST00000556013 MTERF2Q49AM1 385 aa8.73□□□□□ -1.01
PTCSC3-201ENST00000556013 ANO5Q75V66 913 aa8.73□□□□□ -1.01
PTCSC3-201ENST00000556013 ADGRD2Q7Z7M1 963 aa8.73□□□□□ -1.01
PTCSC3-201ENST00000556013 RNF135Q8IUD6 432 aa8.73□□□□□ -1.01
PTCSC3-201ENST00000556013 SLFN12Q8IYM2 578 aa8.73□□□□□ -1.01
PTCSC3-201ENST00000556013 MRPL43Q8N983 215 aaKnown RBP8.73□□□□□ -1.01
PTCSC3-201ENST00000556013 CNNM3Q8NE01 707 aa8.73□□□□□ -1.01
PTCSC3-201ENST00000556013 TCP11Q8WWU5 503 aa8.73□□□□□ -1.01
PTCSC3-201ENST00000556013 NLRP7Q8WX94 980 aa8.73□□□□□ -1.01
PTCSC3-201ENST00000556013 EDAQ92838 391 aa8.73□□□□□ -1.01
PTCSC3-201ENST00000556013 PGBD4Q96DM1 585 aa8.73□□□□□ -1.01
PTCSC3-201ENST00000556013 MFSD14AQ96MC6 490 aa8.73□□□□□ -1.01
PTCSC3-201ENST00000556013 UIMC1Q96RL1 719 aa8.73□□□□□ -1.01
PTCSC3-201ENST00000556013 DHX33Q9H6R0 707 aaKnown RBP8.73□□□□□ -1.01
PTCSC3-201ENST00000556013 ZSWIM4Q9H7M6 989 aa8.73□□□□□ -1.01
PTCSC3-201ENST00000556013 CYP26B1Q9NR63 512 aa8.73□□□□□ -1.01
PTCSC3-201ENST00000556013 KANSL3Q9P2N6 904 aa8.73□□□□□ -1.01
PTCSC3-201ENST00000556013 SUCLA2Q9P2R7 463 aaPredicted RBP8.73□□□□□ -1.01
PTCSC3-201ENST00000556013 SEPT9Q9UHD8 586 aaPredicted RBP8.73□□□□□ -1.01
PTCSC3-201ENST00000556013 LOXHD1Q8IVV2 1947 aa8.73□□□□□ -1.01
PTCSC3-201ENST00000556013 A0A087WZ62 844 aa8.72□□□□□ -1.01
PTCSC3-201ENST00000556013 LINC01565O15544 149 aa8.72□□□□□ -1.01
PTCSC3-201ENST00000556013 LYPLA2O95372 231 aa8.72□□□□□ -1.01
PTCSC3-201ENST00000556013 GLP2RO95838 553 aa8.72□□□□□ -1.01
PTCSC3-201ENST00000556013 FGFR1P11362 822 aa8.72□□□□□ -1.01
PTCSC3-201ENST00000556013 HOXD11P31277 338 aaPredicted RBP8.72□□□□□ -1.01
PTCSC3-201ENST00000556013 ITIH3Q06033 890 aa8.72□□□□□ -1.01
PTCSC3-201ENST00000556013 ANKRD54Q6NXT1 300 aa8.72□□□□□ -1.01
PTCSC3-201ENST00000556013 TMC7Q7Z402 723 aa8.72□□□□□ -1.01
PTCSC3-201ENST00000556013 MRPL10Q7Z7H8 261 aaKnown RBP8.72□□□□□ -1.01
PTCSC3-201ENST00000556013 RBM23Q86U06 439 aaKnown RBP8.72□□□□□ -1.01
PTCSC3-201ENST00000556013 SLC39A11Q8N1S5 342 aa8.72□□□□□ -1.01
PTCSC3-201ENST00000556013 SLC7A3Q8WY07 619 aa8.72□□□□□ -1.01
PTCSC3-201ENST00000556013 HAS1Q92839 578 aa8.72□□□□□ -1.01
PTCSC3-201ENST00000556013 CASP10Q92851 521 aa8.72□□□□□ -1.01
PTCSC3-201ENST00000556013 SCLT1Q96NL6 688 aa8.72□□□□□ -1.01
PTCSC3-201ENST00000556013 NECTIN4Q96NY8 510 aa8.72□□□□□ -1.01
PTCSC3-201ENST00000556013 PRRX2Q99811 253 aa8.72□□□□□ -1.01
PTCSC3-201ENST00000556013 TCF25Q9BQ70 676 aa8.72□□□□□ -1.01
PTCSC3-201ENST00000556013 FDXACB1Q9BRP7 624 aaPredicted RBP8.72□□□□□ -1.01
PTCSC3-201ENST00000556013 S1PR5Q9H228 398 aa8.72□□□□□ -1.01
PTCSC3-201ENST00000556013 IFT122Q9HBG6 1241 aa8.72□□□□□ -1.01
PTCSC3-201ENST00000556013 BRMS1Q9HCU9 246 aa8.72□□□□□ -1.01
PTCSC3-201ENST00000556013 UBN1Q9NPG3 1134 aa8.72□□□□□ -1.01
PTCSC3-201ENST00000556013 FAM105AQ9NUU6 356 aa8.72□□□□□ -1.01
PTCSC3-201ENST00000556013 VAV3Q9UKW4 847 aa8.72□□□□□ -1.01
PTCSC3-201ENST00000556013 TPCN1Q9ULQ1 816 aa8.72□□□□□ -1.01
PTCSC3-201ENST00000556013 FNDC1Q4ZHG4 1894 aaPredicted RBP8.72□□□□□ -1.01
PTCSC3-201ENST00000556013 EML1O00423 815 aa8.71□□□□□ -1.02
PTCSC3-201ENST00000556013 PER2O15055 1255 aa8.71□□□□□ -1.02
PTCSC3-201ENST00000556013 SLC37A4O43826 429 aa8.71□□□□□ -1.02
PTCSC3-201ENST00000556013 MARCH6O60337 910 aa8.71□□□□□ -1.02
PTCSC3-201ENST00000556013 CCNT1O60563 726 aaKnown RBP8.71□□□□□ -1.02
PTCSC3-201ENST00000556013 C1RP00736 705 aa8.71□□□□□ -1.02
PTCSC3-201ENST00000556013 ALDH2P05091 517 aa8.71□□□□□ -1.02
PTCSC3-201ENST00000556013 NEFLP07196 543 aa8.71□□□□□ -1.02
PTCSC3-201ENST00000556013 AXLP30530 894 aa8.71□□□□□ -1.02
PTCSC3-201ENST00000556013 BCAR1P56945 870 aa8.71□□□□□ -1.02
PTCSC3-201ENST00000556013 NCBP1Q09161 790 aaKnown RBP8.71□□□□□ -1.02
PTCSC3-201ENST00000556013 STK3Q13188 491 aa8.71□□□□□ -1.02
PTCSC3-201ENST00000556013 DRP2Q13474 957 aa8.71□□□□□ -1.02
PTCSC3-201ENST00000556013 MXD4Q14582 209 aaPredicted RBP8.71□□□□□ -1.02
PTCSC3-201ENST00000556013 SMC1AQ14683 1233 aaKnown RBP8.71□□□□□ -1.02
PTCSC3-201ENST00000556013 TPRNQ4KMQ1 711 aa8.71□□□□□ -1.02
PTCSC3-201ENST00000556013 CLLU1OSQ5K130 101 aa8.71□□□□□ -1.02
PTCSC3-201ENST00000556013 TWF2Q6IBS0 349 aaKnown RBP8.71□□□□□ -1.02
PTCSC3-201ENST00000556013 GLB1LQ6UWU2 654 aa8.71□□□□□ -1.02
PTCSC3-201ENST00000556013 CATSPER4Q7RTX7 472 aa8.71□□□□□ -1.02
PTCSC3-201ENST00000556013 DDX53Q86TM3 631 aaKnown RBP8.71□□□□□ -1.02
PTCSC3-201ENST00000556013 IFNLR1Q8IU57 520 aaPredicted RBP8.71□□□□□ -1.02
PTCSC3-201ENST00000556013 RHPN2Q8IUC4 686 aa8.71□□□□□ -1.02
PTCSC3-201ENST00000556013 PSPC1Q8WXF1 523 aaKnown RBP8.71□□□□□ -1.02
PTCSC3-201ENST00000556013 GJA10Q969M2 543 aa8.71□□□□□ -1.02
PTCSC3-201ENST00000556013 TMEM169Q96HH4 297 aa8.71□□□□□ -1.02
PTCSC3-201ENST00000556013 CEP170P1Q96L14 293 aa8.71□□□□□ -1.02
PTCSC3-201ENST00000556013 AIFM3Q96NN9 605 aa8.71□□□□□ -1.02
PTCSC3-201ENST00000556013 PPP1R16BQ96T49 567 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms