RNA–Protein interactions for RNA: ENST00000554877.1

CCDC85C-202, Transcript of coiled-coil domain containing 85C, humanhuman

TSL 4

Gene CCDC85C, Length 543 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85C-202ENST00000554877 FGF18O76093 207 aa13.77□□□□□ -0.21
CCDC85C-202ENST00000554877 MMP1P03956 469 aa13.77□□□□□ -0.21
CCDC85C-202ENST00000554877 MCM7P33993 719 aa13.77□□□□□ -0.21
CCDC85C-202ENST00000554877 NDUFV1P49821 464 aa13.77□□□□□ -0.21
CCDC85C-202ENST00000554877 DLX2Q07687 328 aaPredicted RBP13.77□□□□□ -0.21
CCDC85C-202ENST00000554877 GNL2Q13823 731 aaKnown RBP13.77□□□□□ -0.21
CCDC85C-202ENST00000554877 SAFBQ15424 915 aaKnown RBP eCLIP13.77□□□□□ -0.21
CCDC85C-202ENST00000554877 NAALADL2Q58DX5 795 aa13.77□□□□□ -0.21
CCDC85C-202ENST00000554877 OTUD6AQ7L8S5 288 aa13.77□□□□□ -0.21
CCDC85C-202ENST00000554877 SLC7A3Q8WY07 619 aa13.77□□□□□ -0.21
CCDC85C-202ENST00000554877 LPPQ93052 612 aa13.77□□□□□ -0.21
CCDC85C-202ENST00000554877 PPP2R3CQ969Q6 453 aa13.77□□□□□ -0.21
CCDC85C-202ENST00000554877 TMX3Q96JJ7 454 aa13.77□□□□□ -0.21
CCDC85C-202ENST00000554877 CCDC43Q96MW1 224 aaKnown RBP13.77□□□□□ -0.21
CCDC85C-202ENST00000554877 CEP89Q96ST8 783 aa13.77□□□□□ -0.21
CCDC85C-202ENST00000554877 JPH2Q9BR39 696 aaPredicted RBP13.77□□□□□ -0.21
CCDC85C-202ENST00000554877 INO80BQ9C086 356 aaPredicted RBP13.77□□□□□ -0.21
CCDC85C-202ENST00000554877 TMEM117Q9H0C3 514 aa13.77□□□□□ -0.21
CCDC85C-202ENST00000554877 ELAC1Q9H777 363 aaKnown RBP13.77□□□□□ -0.21
CCDC85C-202ENST00000554877 TLE6Q9H808 572 aa13.77□□□□□ -0.21
CCDC85C-202ENST00000554877 CD320Q9NPF0 282 aa13.77□□□□□ -0.21
CCDC85C-202ENST00000554877 RAPGEFL1Q9UHV5 662 aa13.77□□□□□ -0.21
CCDC85C-202ENST00000554877 PCDHA12Q9UN75 941 aa13.77□□□□□ -0.21
CCDC85C-202ENST00000554877 INPP5FQ9Y2H2 1132 aa13.77□□□□□ -0.21
CCDC85C-202ENST00000554877 REV3LO60673 3130 aa13.76□□□□□ -0.21
CCDC85C-202ENST00000554877 NT5C1B-RDH14C9J2C7 533 aa13.76□□□□□ -0.21
CCDC85C-202ENST00000554877 WNT7AO00755 349 aa13.76□□□□□ -0.21
CCDC85C-202ENST00000554877 TBX3O15119 743 aa13.76□□□□□ -0.21
CCDC85C-202ENST00000554877 HOXA2O43364 376 aa13.76□□□□□ -0.21
CCDC85C-202ENST00000554877 NCK2O43639 380 aa13.76□□□□□ -0.21
CCDC85C-202ENST00000554877 SFPQP23246 707 aaKnown RBP eCLIP13.76□□□□□ -0.216e-6■■□□□ 14.5
CCDC85C-202ENST00000554877 YWHABP31946 246 aaKnown RBP13.76□□□□□ -0.21
CCDC85C-202ENST00000554877 CDC42EP1Q00587 391 aa13.76□□□□□ -0.21
CCDC85C-202ENST00000554877 ZNF174Q15697 407 aa13.76□□□□□ -0.21
CCDC85C-202ENST00000554877 PLPP4Q5VZY2 271 aa13.76□□□□□ -0.21
CCDC85C-202ENST00000554877 LRRC55Q6ZSA7 311 aa13.76□□□□□ -0.21
CCDC85C-202ENST00000554877 FAM178BQ8IXR5 827 aa13.76□□□□□ -0.21
CCDC85C-202ENST00000554877 GJD3Q8N144 294 aa13.76□□□□□ -0.21
CCDC85C-202ENST00000554877 ZNF710Q8N1W2 664 aa13.76□□□□□ -0.21
CCDC85C-202ENST00000554877 NEK9Q8TD19 979 aa13.76□□□□□ -0.21
CCDC85C-202ENST00000554877 PRPF31Q8WWY3 499 aaKnown RBP13.76□□□□□ -0.21
CCDC85C-202ENST00000554877 KHSRPQ92945 711 aaKnown RBP eCLIP13.76□□□□□ -0.21
CCDC85C-202ENST00000554877 C8orf76Q96K31 380 aa13.76□□□□□ -0.21
CCDC85C-202ENST00000554877 EIF2AK1Q9BQI3 630 aaKnown RBP13.76□□□□□ -0.21
CCDC85C-202ENST00000554877 GBP3Q9H0R5 595 aa13.76□□□□□ -0.21
CCDC85C-202ENST00000554877 CWH43Q9H720 699 aa13.76□□□□□ -0.21
CCDC85C-202ENST00000554877 ZSWIM4Q9H7M6 989 aa13.76□□□□□ -0.21
CCDC85C-202ENST00000554877 TTC12Q9H892 705 aaPredicted RBP13.76□□□□□ -0.21
CCDC85C-202ENST00000554877 UPF2Q9HAU5 1272 aaKnown RBP13.76□□□□□ -0.21
CCDC85C-202ENST00000554877 DACT1Q9NYF0 836 aa13.76□□□□□ -0.21
CCDC85C-202ENST00000554877 PUF60Q9UHX1 559 aaKnown RBP13.76□□□□□ -0.21
CCDC85C-202ENST00000554877 COL4A3BPQ9Y5P4 624 aa13.76□□□□□ -0.21
CCDC85C-202ENST00000554877 NLRC5Q86WI3 1866 aa13.76□□□□□ -0.21
CCDC85C-202ENST00000554877 IGKV6-21A0A0C4DH24 114 aa13.75□□□□□ -0.21
CCDC85C-202ENST00000554877 NEMFO60524 1076 aa13.75□□□□□ -0.21
CCDC85C-202ENST00000554877 LAG3P18627 525 aa13.75□□□□□ -0.21
CCDC85C-202ENST00000554877 COL9A1P20849 921 aa13.75□□□□□ -0.21
CCDC85C-202ENST00000554877 LTBRP36941 435 aa13.75□□□□□ -0.21
CCDC85C-202ENST00000554877 ERVFC1P60507 584 aa13.75□□□□□ -0.21
CCDC85C-202ENST00000554877 ADAM15Q13444 863 aa13.75□□□□□ -0.21
CCDC85C-202ENST00000554877 PUS10Q3MIT2 529 aaKnown RBP13.75□□□□□ -0.21
CCDC85C-202ENST00000554877 CLLU1OSQ5K130 101 aa13.75□□□□□ -0.21
CCDC85C-202ENST00000554877 KCNT2Q6UVM3 1135 aa13.75□□□□□ -0.21
CCDC85C-202ENST00000554877 MAEAQ7L5Y9 396 aa13.75□□□□□ -0.21
CCDC85C-202ENST00000554877 FAM184AQ8NB25 1140 aa13.75□□□□□ -0.21
CCDC85C-202ENST00000554877 ZNF558Q96NG5 402 aa13.75□□□□□ -0.21
CCDC85C-202ENST00000554877 APOL5Q9BWW9 433 aa13.75□□□□□ -0.21
CCDC85C-202ENST00000554877 ENTPD7Q9NQZ7 604 aa13.75□□□□□ -0.21
CCDC85C-202ENST00000554877 TLR9Q9NR96 1032 aa13.75□□□□□ -0.21
CCDC85C-202ENST00000554877 RNF19AQ9NV58 838 aa13.75□□□□□ -0.21
CCDC85C-202ENST00000554877 FAM50BQ9Y247 325 aa13.75□□□□□ -0.21
CCDC85C-202ENST00000554877 A0A0U1RQF3 1178 aa13.74□□□□□ -0.21
CCDC85C-202ENST00000554877 FAM86C2PA6NEL3 165 aa13.74□□□□□ -0.21
CCDC85C-202ENST00000554877 SLITRK3O94933 977 aa13.74□□□□□ -0.21
CCDC85C-202ENST00000554877 RFC5P40937 340 aa13.74□□□□□ -0.21
CCDC85C-202ENST00000554877 RBM10P98175 930 aaKnown RBP13.74□□□□□ -0.21
CCDC85C-202ENST00000554877 KRT17Q04695 432 aa13.74□□□□□ -0.21
CCDC85C-202ENST00000554877 RNASELQ05823 741 aaKnown RBP13.74□□□□□ -0.21
CCDC85C-202ENST00000554877 LAMTOR4Q0VGL1 99 aa13.74□□□□□ -0.21
CCDC85C-202ENST00000554877 CUL4AQ13619 759 aa13.74□□□□□ -0.21
CCDC85C-202ENST00000554877 EMC2Q15006 297 aa13.74□□□□□ -0.21
CCDC85C-202ENST00000554877 LLGL2Q6P1M3 1020 aa13.74□□□□□ -0.21
CCDC85C-202ENST00000554877 TMC7Q7Z402 723 aa13.74□□□□□ -0.21
CCDC85C-202ENST00000554877 ZNF410Q86VK4 478 aa13.74□□□□□ -0.21
CCDC85C-202ENST00000554877 C4orf19Q8IY42 314 aa13.74□□□□□ -0.21
CCDC85C-202ENST00000554877 RNF149Q8NC42 400 aa13.74□□□□□ -0.21
CCDC85C-202ENST00000554877 PIGOQ8TEQ8 1089 aa13.74□□□□□ -0.21
CCDC85C-202ENST00000554877 PSPC1Q8WXF1 523 aaKnown RBP13.74□□□□□ -0.21
CCDC85C-202ENST00000554877 MTRQ99707 1265 aa13.74□□□□□ -0.21
CCDC85C-202ENST00000554877 CHST12Q9NRB3 414 aa13.74□□□□□ -0.21
CCDC85C-202ENST00000554877 SPG21Q9NZD8 308 aa13.74□□□□□ -0.21
CCDC85C-202ENST00000554877 CD207Q9UJ71 328 aa13.74□□□□□ -0.21
CCDC85C-202ENST00000554877 BARX2Q9UMQ3 279 aaPredicted RBP13.74□□□□□ -0.21
CCDC85C-202ENST00000554877 BRWD1Q9NSI6 2320 aa13.73□□□□□ -0.21
CCDC85C-202ENST00000554877 ST18O60284 1047 aa13.73□□□□□ -0.21
CCDC85C-202ENST00000554877 TBX10O75333 385 aa13.73□□□□□ -0.21
CCDC85C-202ENST00000554877 EOMESO95936 686 aa13.73□□□□□ -0.21
CCDC85C-202ENST00000554877 TECP42680 631 aa13.73□□□□□ -0.21
CCDC85C-202ENST00000554877 PHKA2P46019 1235 aa13.73□□□□□ -0.21
CCDC85C-202ENST00000554877 FAM43BQ6ZT52 329 aaPredicted RBP13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms