RNA–Protein interactions for RNA: ENST00000554040.5

ATXN3-224, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 592 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-224ENST00000554040 PRMT3O60678 531 aa8.07□□□□□ -1.12
ATXN3-224ENST00000554040 GH1P01241 217 aa8.07□□□□□ -1.12
ATXN3-224ENST00000554040 RSPH10BP0C881 870 aa8.07□□□□□ -1.12
ATXN3-224ENST00000554040 TSPY3P0CV98 308 aa8.07□□□□□ -1.12
ATXN3-224ENST00000554040 TSPY8P0CW00 308 aa8.07□□□□□ -1.12
ATXN3-224ENST00000554040 ATP5JP18859 108 aa8.07□□□□□ -1.12
ATXN3-224ENST00000554040 CALML3P27482 149 aa8.07□□□□□ -1.12
ATXN3-224ENST00000554040 CTNNB1P35222 781 aa8.07□□□□□ -1.12
ATXN3-224ENST00000554040 NDUFV1P49821 464 aa8.07□□□□□ -1.12
ATXN3-224ENST00000554040 MRPL12P52815 198 aaKnown RBP8.07□□□□□ -1.12
ATXN3-224ENST00000554040 RRP1P56182 461 aaKnown RBP8.07□□□□□ -1.12
ATXN3-224ENST00000554040 RPS6P62753 249 aaKnown RBP8.07□□□□□ -1.12
ATXN3-224ENST00000554040 ZNF200P98182 395 aaPredicted RBP8.07□□□□□ -1.12
ATXN3-224ENST00000554040 TFAP4Q01664 338 aa8.07□□□□□ -1.12
ATXN3-224ENST00000554040 COASYQ13057 564 aa8.07□□□□□ -1.12
ATXN3-224ENST00000554040 ELOAQ14241 798 aaKnown RBP8.07□□□□□ -1.12
ATXN3-224ENST00000554040 DGKDQ16760 1214 aa8.07□□□□□ -1.12
ATXN3-224ENST00000554040 LY6KQ17RY6 165 aa8.07□□□□□ -1.12
ATXN3-224ENST00000554040 ZKSCAN2Q63HK3 967 aa8.07□□□□□ -1.12
ATXN3-224ENST00000554040 SLC30A10Q6XR72 485 aa8.07□□□□□ -1.12
ATXN3-224ENST00000554040 RNF207Q6ZRF8 634 aa8.07□□□□□ -1.12
ATXN3-224ENST00000554040 CMTR1Q8N1G2 835 aaKnown RBP8.07□□□□□ -1.12
ATXN3-224ENST00000554040 FIBCD1Q8N539 461 aa8.07□□□□□ -1.12
ATXN3-224ENST00000554040 SMRP1Q8NCR6 262 aa8.07□□□□□ -1.12
ATXN3-224ENST00000554040 DNERQ8NFT8 737 aa8.07□□□□□ -1.12
ATXN3-224ENST00000554040 CLEC4DQ8WXI8 215 aa8.07□□□□□ -1.12
ATXN3-224ENST00000554040 SEPT8Q92599 483 aa8.07□□□□□ -1.12
ATXN3-224ENST00000554040 IL17RAQ96F46 866 aa8.07□□□□□ -1.12
ATXN3-224ENST00000554040 ALG1Q9BT22 464 aa8.07□□□□□ -1.12
ATXN3-224ENST00000554040 C11orf84Q9BUA3 381 aaPredicted RBP8.07□□□□□ -1.12
ATXN3-224ENST00000554040 KATNAL1Q9BW62 490 aa8.07□□□□□ -1.12
ATXN3-224ENST00000554040 PHF7Q9BWX1 381 aaPredicted RBP8.07□□□□□ -1.12
ATXN3-224ENST00000554040 SIP14410 1827 aa8.07□□□□□ -1.12
ATXN3-224ENST00000554040 ACACBO00763 2458 aa8.07□□□□□ -1.12
ATXN3-224ENST00000554040 ZFHX4Q86UP3 3567 aa8.07□□□□□ -1.12
ATXN3-224ENST00000554040 BAZ2AQ9UIF9 1905 aaKnown RBP8.07□□□□□ -1.12
ATXN3-224ENST00000554040 WDR87Q6ZQQ6 2873 aa8.06□□□□□ -1.12
ATXN3-224ENST00000554040 SCO2A0A1W2PP80 73 aa8.06□□□□□ -1.12
ATXN3-224ENST00000554040 HAS3O00219 553 aa8.06□□□□□ -1.12
ATXN3-224ENST00000554040 LINC00271P0C7V0 271 aa8.06□□□□□ -1.12
ATXN3-224ENST00000554040 EIF2AK2P19525 551 aaKnown RBP8.06□□□□□ -1.12
ATXN3-224ENST00000554040 ICAM3P32942 547 aa8.06□□□□□ -1.12
ATXN3-224ENST00000554040 THPOP40225 353 aa8.06□□□□□ -1.12
ATXN3-224ENST00000554040 ARHGAP1Q07960 439 aa8.06□□□□□ -1.12
ATXN3-224ENST00000554040 CAMK1Q14012 370 aa8.06□□□□□ -1.12
ATXN3-224ENST00000554040 KIAA0753Q2KHM9 967 aa8.06□□□□□ -1.12
ATXN3-224ENST00000554040 BTNL9Q6UXG8 535 aa8.06□□□□□ -1.12
ATXN3-224ENST00000554040 ADSSL1Q8N142 457 aa8.06□□□□□ -1.12
ATXN3-224ENST00000554040 CLP1Q92989 425 aaKnown RBP8.06□□□□□ -1.12
ATXN3-224ENST00000554040 PPP2R3CQ969Q6 453 aa8.06□□□□□ -1.12
ATXN3-224ENST00000554040 PLD4Q96BZ4 506 aa8.06□□□□□ -1.12
ATXN3-224ENST00000554040 KIF1BPQ96EK5 621 aa8.06□□□□□ -1.12
ATXN3-224ENST00000554040 MEGF10Q96KG7 1140 aa8.06□□□□□ -1.12
ATXN3-224ENST00000554040 RPGRIP1Q96KN7 1286 aa8.06□□□□□ -1.12
ATXN3-224ENST00000554040 RIPOR3Q96MK2 946 aa8.06□□□□□ -1.12
ATXN3-224ENST00000554040 PSMG3-AS1Q96PY0 264 aa8.06□□□□□ -1.12
ATXN3-224ENST00000554040 IFIH1Q9BYX4 1025 aaKnown RBP8.06□□□□□ -1.12
ATXN3-224ENST00000554040 INCENPQ9NQS7 918 aa8.06□□□□□ -1.12
ATXN3-224ENST00000554040 CLEC1BQ9P126 229 aa8.06□□□□□ -1.12
ATXN3-224ENST00000554040 RWDD3Q9Y3V2 267 aa8.06□□□□□ -1.12
ATXN3-224ENST00000554040 SPTBN2O15020 2390 aa8.06□□□□□ -1.12
ATXN3-224ENST00000554040 PLIN4Q96Q06 1357 aa8.06□□□□□ -1.12
ATXN3-224ENST00000554040 MYH8P13535 1937 aa8.05□□□□□ -1.12
ATXN3-224ENST00000554040 GREB1LQ9C091 1923 aaPredicted RBP8.05□□□□□ -1.12
ATXN3-224ENST00000554040 TANC1Q9C0D5 1861 aa8.05□□□□□ -1.12
ATXN3-224ENST00000554040 PATL2C9JE40 543 aaKnown RBP8.05□□□□□ -1.12
ATXN3-224ENST00000554040 KRT37O76014 449 aa8.05□□□□□ -1.12
ATXN3-224ENST00000554040 F2P00734 622 aa8.05□□□□□ -1.12
ATXN3-224ENST00000554040 MMP1P03956 469 aa8.05□□□□□ -1.12
ATXN3-224ENST00000554040 TDO2P48775 406 aa8.05□□□□□ -1.12
ATXN3-224ENST00000554040 TTBK2Q6IQ55 1244 aa8.05□□□□□ -1.12
ATXN3-224ENST00000554040 IGF2-ASQ6U949 168 aa8.05□□□□□ -1.12
ATXN3-224ENST00000554040 SEPT14Q6ZU15 432 aa8.05□□□□□ -1.12
ATXN3-224ENST00000554040 CHST3Q7LGC8 479 aa8.05□□□□□ -1.12
ATXN3-224ENST00000554040 SERINC5Q86VE9 423 aa8.05□□□□□ -1.12
ATXN3-224ENST00000554040 EFHBQ8N7U6 833 aa8.05□□□□□ -1.12
ATXN3-224ENST00000554040 DCAF4Q8WV16 495 aa8.05□□□□□ -1.12
ATXN3-224ENST00000554040 NKD2Q969F2 451 aaPredicted RBP8.05□□□□□ -1.12
ATXN3-224ENST00000554040 OSBP2Q969R2 916 aa8.05□□□□□ -1.12
ATXN3-224ENST00000554040 KRTAP9-2Q9BYQ4 174 aa8.05□□□□□ -1.12
ATXN3-224ENST00000554040 EPB41L4AQ9HCS5 686 aaPredicted RBP8.05□□□□□ -1.12
ATXN3-224ENST00000554040 ZFP64Q9NPA5 681 aa8.05□□□□□ -1.12
ATXN3-224ENST00000554040 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.05□□□□□ -1.12
ATXN3-224ENST00000554040 PNMA2Q9UL42 364 aa8.05□□□□□ -1.12
ATXN3-224ENST00000554040 PLAGL2Q9UPG8 496 aa8.05□□□□□ -1.12
ATXN3-224ENST00000554040 USP15Q9Y4E8 981 aaPredicted RBP8.05□□□□□ -1.12
ATXN3-224ENST00000554040 MICAL3Q7RTP6 2002 aa8.05□□□□□ -1.12
ATXN3-224ENST00000554040 CEP250Q9BV73 2442 aa8.04□□□□□ -1.12
ATXN3-224ENST00000554040 MED19A0JLT2 244 aaPredicted RBP8.04□□□□□ -1.12
ATXN3-224ENST00000554040 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.04□□□□□ -1.12
ATXN3-224ENST00000554040 PDGFBP01127 241 aaPredicted RBP8.04□□□□□ -1.12
ATXN3-224ENST00000554040 APPP05067 770 aa8.04□□□□□ -1.12
ATXN3-224ENST00000554040 ATF7P17544 494 aaPredicted RBP8.04□□□□□ -1.12
ATXN3-224ENST00000554040 GNAT2P19087 354 aa8.04□□□□□ -1.12
ATXN3-224ENST00000554040 SOX18P35713 384 aa8.04□□□□□ -1.12
ATXN3-224ENST00000554040 SLC16A2P36021 539 aa8.04□□□□□ -1.12
ATXN3-224ENST00000554040 PTPN21Q16825 1174 aa8.04□□□□□ -1.12
ATXN3-224ENST00000554040 SYDE2Q5VT97 1194 aa8.04□□□□□ -1.12
ATXN3-224ENST00000554040 RASGRP2Q7LDG7 609 aa8.04□□□□□ -1.12
ATXN3-224ENST00000554040 FRMD5Q7Z6J6 570 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms