RNA–Protein interactions for RNA: ENST00000553779.5

ACTN1-210, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 530 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-210ENST00000553779 HOXB8P17481 243 aaPredicted RBP11.13□□□□□ -0.63
ACTN1-210ENST00000553779 HSPA4P34932 840 aa11.13□□□□□ -0.63
ACTN1-210ENST00000553779 USP11P51784 963 aa11.13□□□□□ -0.63
ACTN1-210ENST00000553779 FAM189BP81408 668 aa11.13□□□□□ -0.63
ACTN1-210ENST00000553779 CDC42EP1Q00587 391 aa11.13□□□□□ -0.63
ACTN1-210ENST00000553779 SIGLEC14Q08ET2 396 aa11.13□□□□□ -0.63
ACTN1-210ENST00000553779 STK3Q13188 491 aa11.13□□□□□ -0.63
ACTN1-210ENST00000553779 DSC3Q14574 896 aa11.13□□□□□ -0.63
ACTN1-210ENST00000553779 UGCGQ16739 394 aa11.13□□□□□ -0.63
ACTN1-210ENST00000553779 LONRF3Q496Y0 759 aa11.13□□□□□ -0.63
ACTN1-210ENST00000553779 XKR3Q5GH77 459 aa11.13□□□□□ -0.63
ACTN1-210ENST00000553779 GLB1LQ6UWU2 654 aa11.13□□□□□ -0.63
ACTN1-210ENST00000553779 CATSPER4Q7RTX7 472 aa11.13□□□□□ -0.63
ACTN1-210ENST00000553779 RHPN2Q8IUC4 686 aa11.13□□□□□ -0.63
ACTN1-210ENST00000553779 VN1R2Q8NFZ6 395 aa11.13□□□□□ -0.63
ACTN1-210ENST00000553779 RDM1Q8NG50 284 aa11.13□□□□□ -0.63
ACTN1-210ENST00000553779 URGCPQ8TCY9 931 aa11.13□□□□□ -0.63
ACTN1-210ENST00000553779 CRYGNQ8WXF5 182 aa11.13□□□□□ -0.63
ACTN1-210ENST00000553779 SLC5A5Q92911 643 aa11.13□□□□□ -0.63
ACTN1-210ENST00000553779 NLRP4Q96MN2 994 aa11.13□□□□□ -0.63
ACTN1-210ENST00000553779 CASD1Q96PB1 797 aa11.13□□□□□ -0.63
ACTN1-210ENST00000553779 JPH2Q9BR39 696 aaPredicted RBP11.13□□□□□ -0.63
ACTN1-210ENST00000553779 INO80BQ9C086 356 aaPredicted RBP11.13□□□□□ -0.63
ACTN1-210ENST00000553779 GBP3Q9H0R5 595 aa11.13□□□□□ -0.63
ACTN1-210ENST00000553779 ADAMTS10Q9H324 1103 aa11.13□□□□□ -0.63
ACTN1-210ENST00000553779 PCDHA4Q9UN74 947 aa11.13□□□□□ -0.63
ACTN1-210ENST00000553779 CYP46A1Q9Y6A2 500 aa11.13□□□□□ -0.63
ACTN1-210ENST00000553779 FAM186AA6NE01 2351 aa11.12□□□□□ -0.63
ACTN1-210ENST00000553779 CCDC194A0A1B0GVG4 234 aa11.12□□□□□ -0.63
ACTN1-210ENST00000553779 CARNS1A5YM72 827 aa11.12□□□□□ -0.63
ACTN1-210ENST00000553779 HIDE1A8MVS5 230 aa11.12□□□□□ -0.63
ACTN1-210ENST00000553779 ADAMTS3O15072 1205 aa11.12□□□□□ -0.63
ACTN1-210ENST00000553779 ZNF862O60290 1169 aa11.12□□□□□ -0.63
ACTN1-210ENST00000553779 CSDE1O75534 798 aaKnown RBP11.12□□□□□ -0.63
ACTN1-210ENST00000553779 DEXIO95424 95 aa11.12□□□□□ -0.63
ACTN1-210ENST00000553779 TDP2O95551 362 aa11.12□□□□□ -0.63
ACTN1-210ENST00000553779 EOMESO95936 686 aa11.12□□□□□ -0.63
ACTN1-210ENST00000553779 NONOQ15233 471 aaKnown RBP eCLIP11.12□□□□□ -0.63
ACTN1-210ENST00000553779 PTPN21Q16825 1174 aa11.12□□□□□ -0.63
ACTN1-210ENST00000553779 CLLU1OSQ5K130 101 aa11.12□□□□□ -0.63
ACTN1-210ENST00000553779 BLIDQ8IZY5 108 aa11.12□□□□□ -0.63
ACTN1-210ENST00000553779 FBXL6Q8N531 539 aa11.12□□□□□ -0.63
ACTN1-210ENST00000553779 GJA10Q969M2 543 aa11.12□□□□□ -0.63
ACTN1-210ENST00000553779 LENG9Q96B70 501 aa11.12□□□□□ -0.63
ACTN1-210ENST00000553779 CCDC43Q96MW1 224 aaKnown RBP11.12□□□□□ -0.63
ACTN1-210ENST00000553779 NECTIN4Q96NY8 510 aa11.12□□□□□ -0.63
ACTN1-210ENST00000553779 FAM193BQ96PV7 902 aaPredicted RBP11.12□□□□□ -0.63
ACTN1-210ENST00000553779 SUCLA2Q9P2R7 463 aaPredicted RBP11.12□□□□□ -0.63
ACTN1-210ENST00000553779 DDX25Q9UHL0 483 aaKnown RBP11.12□□□□□ -0.63
ACTN1-210ENST00000553779 PLXNA3P51805 1871 aa11.11□□□□□ -0.63
ACTN1-210ENST00000553779 A0A087WZ62 844 aa11.11□□□□□ -0.63
ACTN1-210ENST00000553779 A0A0U1RQF3 1178 aa11.11□□□□□ -0.63
ACTN1-210ENST00000553779 NT5C1B-RDH14C9J2C7 533 aa11.11□□□□□ -0.63
ACTN1-210ENST00000553779 DKC1O60832 514 aaKnown RBP eCLIP11.11□□□□□ -0.63
ACTN1-210ENST00000553779 CDKL5O76039 1030 aa11.11□□□□□ -0.63
ACTN1-210ENST00000553779 CXCL14O95715 111 aa11.11□□□□□ -0.63
ACTN1-210ENST00000553779 XBP1P17861 261 aa11.11□□□□□ -0.63
ACTN1-210ENST00000553779 PDIA3P30101 505 aaKnown RBP11.11□□□□□ -0.63
ACTN1-210ENST00000553779 MTHFRP42898 656 aa11.11□□□□□ -0.63
ACTN1-210ENST00000553779 RAB27AP51159 221 aa11.11□□□□□ -0.63
ACTN1-210ENST00000553779 POLGP54098 1239 aaPredicted RBP11.11□□□□□ -0.63
ACTN1-210ENST00000553779 BCAR1P56945 870 aa11.11□□□□□ -0.63
ACTN1-210ENST00000553779 MTMR3Q13615 1198 aa11.11□□□□□ -0.63
ACTN1-210ENST00000553779 LETM2Q2VYF4 491 aa11.11□□□□□ -0.63
ACTN1-210ENST00000553779 Q4G0T1 1027 aa11.11□□□□□ -0.63
ACTN1-210ENST00000553779 RARS2Q5T160 578 aaKnown RBP11.11□□□□□ -0.63
ACTN1-210ENST00000553779 LRRC55Q6ZSA7 311 aa11.11□□□□□ -0.63
ACTN1-210ENST00000553779 RUFY3Q7L099 469 aa11.11□□□□□ -0.63
ACTN1-210ENST00000553779 KRT25Q7Z3Z0 450 aa11.11□□□□□ -0.63
ACTN1-210ENST00000553779 ZNF410Q86VK4 478 aa11.11□□□□□ -0.63
ACTN1-210ENST00000553779 VPS52Q8N1B4 723 aa11.11□□□□□ -0.63
ACTN1-210ENST00000553779 SLC39A11Q8N1S5 342 aa11.11□□□□□ -0.63
ACTN1-210ENST00000553779 TDRD5Q8NAT2 981 aaKnown RBP11.11□□□□□ -0.63
ACTN1-210ENST00000553779 SLC7A3Q8WY07 619 aa11.11□□□□□ -0.63
ACTN1-210ENST00000553779 RSPH1Q8WYR4 309 aa11.11□□□□□ -0.63
ACTN1-210ENST00000553779 PGBD4Q96DM1 585 aa11.11□□□□□ -0.63
ACTN1-210ENST00000553779 RIPOR3Q96MK2 946 aa11.11□□□□□ -0.63
ACTN1-210ENST00000553779 SH2D3AQ9BRG2 576 aa11.11□□□□□ -0.63
ACTN1-210ENST00000553779 FDXACB1Q9BRP7 624 aaPredicted RBP11.11□□□□□ -0.63
ACTN1-210ENST00000553779 MFSD1Q9H3U5 465 aa11.11□□□□□ -0.63
ACTN1-210ENST00000553779 CHST12Q9NRB3 414 aa11.11□□□□□ -0.63
ACTN1-210ENST00000553779 DZANK1Q9NVP4 752 aa11.11□□□□□ -0.63
ACTN1-210ENST00000553779 DBR1Q9UK59 544 aaKnown RBP11.11□□□□□ -0.63
ACTN1-210ENST00000553779 WDR87Q6ZQQ6 2873 aa11.1□□□□□ -0.63
ACTN1-210ENST00000553779 TMEM150BA6NC51 233 aa11.1□□□□□ -0.63
ACTN1-210ENST00000553779 C2orf71A6NGG8 1288 aa11.1□□□□□ -0.63
ACTN1-210ENST00000553779 PHKA2P46019 1235 aa11.1□□□□□ -0.63
ACTN1-210ENST00000553779 PSMC5P62195 406 aa11.1□□□□□ -0.63
ACTN1-210ENST00000553779 ITIH3Q06033 890 aa11.1□□□□□ -0.63
ACTN1-210ENST00000553779 INF2Q27J81 1249 aa11.1□□□□□ -0.63
ACTN1-210ENST00000553779 NOMO2Q5JPE7 1267 aa11.1□□□□□ -0.63
ACTN1-210ENST00000553779 PLA2G4FQ68DD2 849 aa11.1□□□□□ -0.63
ACTN1-210ENST00000553779 BMP8AQ7Z5Y6 402 aa11.1□□□□□ -0.63
ACTN1-210ENST00000553779 CABP7Q86V35 215 aa11.1□□□□□ -0.63
ACTN1-210ENST00000553779 LINC01465Q8N7H1 131 aa11.1□□□□□ -0.63
ACTN1-210ENST00000553779 SUSD6Q92537 303 aa11.1□□□□□ -0.63
ACTN1-210ENST00000553779 LPPQ93052 612 aa11.1□□□□□ -0.63
ACTN1-210ENST00000553779 BMP2KQ9NSY1 1161 aaPredicted RBP11.1□□□□□ -0.63
ACTN1-210ENST00000553779 RNF19AQ9NV58 838 aa11.1□□□□□ -0.63
ACTN1-210ENST00000553779 TRIP11Q15643 1979 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 98.6 ms