RNA–Protein interactions for RNA: ENST00000553718.1

TTC8-208, Transcript of tetratricopeptide repeat domain 8, humanhuman

TSL 3

Gene TTC8, Length 479 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC8-208ENST00000553718 SYT11Q9BT88 431 aa11.71□□□□□ -0.53
TTC8-208ENST00000553718 MOV10L1Q9BXT6 1211 aaKnown RBP11.71□□□□□ -0.53
TTC8-208ENST00000553718 PDGFDQ9GZP0 370 aaPredicted RBP11.71□□□□□ -0.53
TTC8-208ENST00000553718 RPAP3Q9H6T3 665 aaPredicted RBP11.71□□□□□ -0.53
TTC8-208ENST00000553718 PICK1Q9NRD5 415 aa11.71□□□□□ -0.53
TTC8-208ENST00000553718 HOXC10Q9NYD6 342 aa11.71□□□□□ -0.53
TTC8-208ENST00000553718 SUCLA2Q9P2R7 463 aaPredicted RBP11.71□□□□□ -0.53
TTC8-208ENST00000553718 APEX2Q9UBZ4 518 aa11.71□□□□□ -0.53
TTC8-208ENST00000553718 SALL4Q9UJQ4 1053 aa11.71□□□□□ -0.53
TTC8-208ENST00000553718 DNAJC12Q9UKB3 198 aa11.71□□□□□ -0.53
TTC8-208ENST00000553718 PCDHA10Q9Y5I2 948 aa11.71□□□□□ -0.53
TTC8-208ENST00000553718 PFASO15067 1338 aa11.7□□□□□ -0.54
TTC8-208ENST00000553718 F8VZ95 297 aa11.7□□□□□ -0.54
TTC8-208ENST00000553718 CCDC188H7C350 402 aa11.7□□□□□ -0.54
TTC8-208ENST00000553718 K7ENM7 598 aa11.7□□□□□ -0.54
TTC8-208ENST00000553718 PTPRAP18433 802 aa11.7□□□□□ -0.54
TTC8-208ENST00000553718 GMPSP49915 693 aaPredicted RBP11.7□□□□□ -0.54
TTC8-208ENST00000553718 VAMP7P51809 220 aa11.7□□□□□ -0.54
TTC8-208ENST00000553718 KIF22Q14807 665 aa11.7□□□□□ -0.54
TTC8-208ENST00000553718 RPS6KA1Q15418 735 aa11.7□□□□□ -0.54
TTC8-208ENST00000553718 SUPT20HL1Q3ZLR7 823 aa11.7□□□□□ -0.54
TTC8-208ENST00000553718 HSP90B2PQ58FF3 399 aa11.7□□□□□ -0.54
TTC8-208ENST00000553718 CATSPERGQ6ZRH7 1159 aa11.7□□□□□ -0.54
TTC8-208ENST00000553718 HAUS6Q7Z4H7 955 aa11.7□□□□□ -0.54
TTC8-208ENST00000553718 CPXCR1Q8N123 301 aa11.7□□□□□ -0.54
TTC8-208ENST00000553718 LMO3Q8TAP4 145 aa11.7□□□□□ -0.54
TTC8-208ENST00000553718 TMC2Q8TDI7 906 aa11.7□□□□□ -0.54
TTC8-208ENST00000553718 MORC4Q8TE76 937 aa11.7□□□□□ -0.54
TTC8-208ENST00000553718 COG1Q8WTW3 980 aa11.7□□□□□ -0.54
TTC8-208ENST00000553718 ATP6V0A1Q93050 837 aa11.7□□□□□ -0.54
TTC8-208ENST00000553718 CAPZA3Q96KX2 299 aa11.7□□□□□ -0.54
TTC8-208ENST00000553718 RNF146Q9NTX7 359 aa11.7□□□□□ -0.54
TTC8-208ENST00000553718 TTC7AQ9ULT0 858 aaPredicted RBP11.7□□□□□ -0.54
TTC8-208ENST00000553718 COQ4Q9Y3A0 265 aa11.7□□□□□ -0.54
TTC8-208ENST00000553718 BRCA1P38398 1863 aaKnown RBP11.7□□□□□ -0.54
TTC8-208ENST00000553718 DDX3XO00571 662 aaKnown RBP eCLIP11.69□□□□□ -0.548e-6■■■□□ 14.7
TTC8-208ENST00000553718 ZBTB39O15060 712 aa11.69□□□□□ -0.54
TTC8-208ENST00000553718 ZNF185O15231 689 aa11.69□□□□□ -0.54
TTC8-208ENST00000553718 BUB1O43683 1085 aa11.69□□□□□ -0.54
TTC8-208ENST00000553718 EVI5O60447 810 aa11.69□□□□□ -0.54
TTC8-208ENST00000553718 KIF4AO95239 1232 aa11.69□□□□□ -0.54
TTC8-208ENST00000553718 NR3C2P08235 984 aa11.69□□□□□ -0.54
TTC8-208ENST00000553718 ICAM3P32942 547 aa11.69□□□□□ -0.54
TTC8-208ENST00000553718 CYP2C19P33261 490 aa11.69□□□□□ -0.54
TTC8-208ENST00000553718 MYL7Q01449 175 aa11.69□□□□□ -0.54
TTC8-208ENST00000553718 APBA1Q02410 837 aa11.69□□□□□ -0.54
TTC8-208ENST00000553718 SPP2Q13103 211 aa11.69□□□□□ -0.54
TTC8-208ENST00000553718 MTMR2Q13614 643 aa11.69□□□□□ -0.54
TTC8-208ENST00000553718 DRAP1Q14919 205 aaPredicted RBP11.69□□□□□ -0.54
TTC8-208ENST00000553718 GNPTABQ3T906 1256 aa11.69□□□□□ -0.54
TTC8-208ENST00000553718 MAP4K3Q8IVH8 894 aa11.69□□□□□ -0.54
TTC8-208ENST00000553718 IFT20Q8IY31 132 aa11.69□□□□□ -0.54
TTC8-208ENST00000553718 RASGEF1CQ8N431 466 aa11.69□□□□□ -0.54
TTC8-208ENST00000553718 LRRC57Q8N9N7 239 aa11.69□□□□□ -0.54
TTC8-208ENST00000553718 MCPH1Q8NEM0 835 aa11.69□□□□□ -0.54
TTC8-208ENST00000553718 CHST13Q8NET6 341 aa11.69□□□□□ -0.54
TTC8-208ENST00000553718 DNERQ8NFT8 737 aa11.69□□□□□ -0.54
TTC8-208ENST00000553718 IL31RAQ8NI17 732 aa11.69□□□□□ -0.54
TTC8-208ENST00000553718 AENQ8WTP8 325 aaKnown RBP11.69□□□□□ -0.54
TTC8-208ENST00000553718 CAVIN3Q969G5 261 aa11.69□□□□□ -0.54
TTC8-208ENST00000553718 CCDC43Q96MW1 224 aaKnown RBP11.69□□□□□ -0.54
TTC8-208ENST00000553718 INTS2Q9H0H0 1204 aaKnown RBP11.69□□□□□ -0.54
TTC8-208ENST00000553718 TMEM59LQ9UK28 342 aa11.69□□□□□ -0.54
TTC8-208ENST00000553718 SAMM50Q9Y512 469 aa11.69□□□□□ -0.54
TTC8-208ENST00000553718 PPME1Q9Y570 386 aa11.69□□□□□ -0.54
TTC8-208ENST00000553718 DOCK1Q14185 1865 aa11.69□□□□□ -0.54
TTC8-208ENST00000553718 SMCHD1A6NHR9 2005 aa11.69□□□□□ -0.54
TTC8-208ENST00000553718 NCANO14594 1321 aa11.68□□□□□ -0.54
TTC8-208ENST00000553718 ANKRD62A6NC57 917 aa11.68□□□□□ -0.54
TTC8-208ENST00000553718 A6NNZ2 444 aa11.68□□□□□ -0.54
TTC8-208ENST00000553718 DGAT1O75907 488 aa11.68□□□□□ -0.54
TTC8-208ENST00000553718 PSAPP07602 524 aa11.68□□□□□ -0.54
TTC8-208ENST00000553718 ERCC3P19447 782 aa11.68□□□□□ -0.54
TTC8-208ENST00000553718 EIF2AK2P19525 551 aaKnown RBP11.68□□□□□ -0.54
TTC8-208ENST00000553718 TNFAIP3P21580 790 aa11.68□□□□□ -0.54
TTC8-208ENST00000553718 GARTP22102 1010 aa11.68□□□□□ -0.54
TTC8-208ENST00000553718 EPHB4P54760 987 aa11.68□□□□□ -0.54
TTC8-208ENST00000553718 TNNC1P63316 161 aa11.68□□□□□ -0.54
TTC8-208ENST00000553718 BAATQ14032 418 aaPredicted RBP11.68□□□□□ -0.54
TTC8-208ENST00000553718 TUBB8Q3ZCM7 444 aa11.68□□□□□ -0.54
TTC8-208ENST00000553718 EPC2Q52LR7 807 aa11.68□□□□□ -0.54
TTC8-208ENST00000553718 NBPF12Q5TAG4 269 aaPredicted RBP11.68□□□□□ -0.54
TTC8-208ENST00000553718 ALS2CLQ60I27 953 aa11.68□□□□□ -0.54
TTC8-208ENST00000553718 NFRKBQ6P4R8 1299 aa11.68□□□□□ -0.54
TTC8-208ENST00000553718 RHOT2Q8IXI1 618 aa11.68□□□□□ -0.54
TTC8-208ENST00000553718 TPCN2Q8NHX9 752 aa11.68□□□□□ -0.54
TTC8-208ENST00000553718 SCFD2Q8WU76 684 aa11.68□□□□□ -0.54
TTC8-208ENST00000553718 RFFLQ8WZ73 363 aa11.68□□□□□ -0.54
TTC8-208ENST00000553718 ATG4CQ96DT6 458 aa11.68□□□□□ -0.54
TTC8-208ENST00000553718 KLRG1Q96E93 195 aa11.68□□□□□ -0.54
TTC8-208ENST00000553718 FBXL18Q96ME1 805 aa11.68□□□□□ -0.54
TTC8-208ENST00000553718 TEX13BQ9BXU2 312 aa11.68□□□□□ -0.54
TTC8-208ENST00000553718 ACAD9Q9H845 621 aa11.68□□□□□ -0.54
TTC8-208ENST00000553718 KIAA1586Q9HCI6 787 aa11.68□□□□□ -0.54
TTC8-208ENST00000553718 PDLIM7Q9NR12 457 aa11.68□□□□□ -0.54
TTC8-208ENST00000553718 GDF3Q9NR23 364 aa11.68□□□□□ -0.54
TTC8-208ENST00000553718 TMOD4Q9NZQ9 345 aa11.68□□□□□ -0.54
TTC8-208ENST00000553718 STIM2Q9P246 746 aa11.68□□□□□ -0.54
TTC8-208ENST00000553718 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.68□□□□□ -0.54
TTC8-208ENST00000553718 ZNF214Q9UL59 606 aaPredicted RBP11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms