RNA–Protein interactions for RNA: ENST00000553488.5

ATXN3-219, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-219ENST00000553488 PCDHGC4Q9Y5F7 938 aa8.44□□□□□ -1.06
ATXN3-219ENST00000553488 GPC6Q9Y625 555 aaPredicted RBP8.44□□□□□ -1.06
ATXN3-219ENST00000553488 SERTM1A2A2V5 107 aa8.43□□□□□ -1.06
ATXN3-219ENST00000553488 TMEM221A6NGB7 291 aa8.43□□□□□ -1.06
ATXN3-219ENST00000553488 B4E1Z4 1266 aa8.43□□□□□ -1.06
ATXN3-219ENST00000553488 LOC730098B7Z3J9 87 aa8.43□□□□□ -1.06
ATXN3-219ENST00000553488 M0R296 226 aa8.43□□□□□ -1.06
ATXN3-219ENST00000553488 STXBP3O00186 592 aa8.43□□□□□ -1.06
ATXN3-219ENST00000553488 CHRNA1P02708 482 aa8.43□□□□□ -1.06
ATXN3-219ENST00000553488 PARP1P09874 1014 aaKnown RBP8.43□□□□□ -1.06
ATXN3-219ENST00000553488 DNAJB1P25685 340 aa8.43□□□□□ -1.06
ATXN3-219ENST00000553488 ICAM3P32942 547 aa8.43□□□□□ -1.06
ATXN3-219ENST00000553488 MRPS9P82933 396 aaKnown RBP8.43□□□□□ -1.06
ATXN3-219ENST00000553488 ADAM15Q13444 863 aa8.43□□□□□ -1.06
ATXN3-219ENST00000553488 CBX2Q14781 532 aaPredicted RBP8.43□□□□□ -1.06
ATXN3-219ENST00000553488 CCDC178Q5BJE1 867 aa8.43□□□□□ -1.06
ATXN3-219ENST00000553488 METTL7BQ6UX53 244 aa8.43□□□□□ -1.06
ATXN3-219ENST00000553488 ADGRD2Q7Z7M1 963 aa8.43□□□□□ -1.06
ATXN3-219ENST00000553488 IQCA1Q86XH1 822 aa8.43□□□□□ -1.06
ATXN3-219ENST00000553488 SVOPQ8N4V2 548 aa8.43□□□□□ -1.06
ATXN3-219ENST00000553488 SMRP1Q8NCR6 262 aa8.43□□□□□ -1.06
ATXN3-219ENST00000553488 INPP4AQ96PE3 977 aaPredicted RBP8.43□□□□□ -1.06
ATXN3-219ENST00000553488 GPR20Q99678 358 aa8.43□□□□□ -1.06
ATXN3-219ENST00000553488 C2orf49Q9BVC5 232 aaPredicted RBP8.43□□□□□ -1.06
ATXN3-219ENST00000553488 SETD4Q9NVD3 440 aa8.43□□□□□ -1.06
ATXN3-219ENST00000553488 CLEC1BQ9P126 229 aa8.43□□□□□ -1.06
ATXN3-219ENST00000553488 SUPT16HQ9Y5B9 1047 aaKnown RBP8.43□□□□□ -1.06
ATXN3-219ENST00000553488 ZBTB5O15062 677 aa8.42□□□□□ -1.06
ATXN3-219ENST00000553488 EFSO43281 561 aa8.42□□□□□ -1.06
ATXN3-219ENST00000553488 DHX16O60231 1041 aaKnown RBP8.42□□□□□ -1.06
ATXN3-219ENST00000553488 GLP2RO95838 553 aa8.42□□□□□ -1.06
ATXN3-219ENST00000553488 GHRP10912 638 aa8.42□□□□□ -1.06
ATXN3-219ENST00000553488 CCND2P30279 289 aa8.42□□□□□ -1.06
ATXN3-219ENST00000553488 MAP2K3P46734 347 aa8.42□□□□□ -1.06
ATXN3-219ENST00000553488 GSK3AP49840 483 aa8.42□□□□□ -1.06
ATXN3-219ENST00000553488 TNP2Q05952 138 aa8.42□□□□□ -1.06
ATXN3-219ENST00000553488 LPIN1Q14693 890 aa8.42□□□□□ -1.06
ATXN3-219ENST00000553488 SEC23AQ15436 765 aa8.42□□□□□ -1.06
ATXN3-219ENST00000553488 RUFY4Q6ZNE9 571 aa8.42□□□□□ -1.06
ATXN3-219ENST00000553488 SAMD3Q8N6K7 520 aa8.42□□□□□ -1.06
ATXN3-219ENST00000553488 P2RX5Q93086 422 aa8.42□□□□□ -1.06
ATXN3-219ENST00000553488 PLVAPQ9BX97 442 aa8.42□□□□□ -1.06
ATXN3-219ENST00000553488 USP26Q9BXU7 913 aa8.42□□□□□ -1.06
ATXN3-219ENST00000553488 MLXIPQ9HAP2 919 aa8.42□□□□□ -1.06
ATXN3-219ENST00000553488 VAT1LQ9HCJ6 419 aa8.42□□□□□ -1.06
ATXN3-219ENST00000553488 MAD2L2Q9UI95 211 aa8.42□□□□□ -1.06
ATXN3-219ENST00000553488 PLAGL2Q9UPG8 496 aa8.42□□□□□ -1.06
ATXN3-219ENST00000553488 PCDHA1Q9Y5I3 950 aa8.42□□□□□ -1.06
ATXN3-219ENST00000553488 MRPL42Q9Y6G3 142 aaKnown RBP8.42□□□□□ -1.06
ATXN3-219ENST00000553488 WDR81Q562E7 1941 aa8.42□□□□□ -1.06
ATXN3-219ENST00000553488 EVPLQ92817 2033 aa8.42□□□□□ -1.06
ATXN3-219ENST00000553488 DENND4AQ7Z401 1863 aa8.41□□□□□ -1.06
ATXN3-219ENST00000553488 KLRF2D3W0D1 207 aa8.41□□□□□ -1.06
ATXN3-219ENST00000553488 NOP56O00567 594 aaKnown RBP8.41□□□□□ -1.06
ATXN3-219ENST00000553488 ZNF213O14771 459 aa8.41□□□□□ -1.06
ATXN3-219ENST00000553488 ATXN7O15265 892 aaPredicted RBP8.41□□□□□ -1.06
ATXN3-219ENST00000553488 DGKIO75912 1065 aa8.41□□□□□ -1.06
ATXN3-219ENST00000553488 CSPG5O95196 566 aa8.41□□□□□ -1.06
ATXN3-219ENST00000553488 ITGB1P05556 798 aa8.41□□□□□ -1.06
ATXN3-219ENST00000553488 FAM157BP0CG42 384 aa8.41□□□□□ -1.06
ATXN3-219ENST00000553488 FGFR3P22607 806 aa8.41□□□□□ -1.06
ATXN3-219ENST00000553488 VCPP55072 806 aaKnown RBP8.41□□□□□ -1.06
ATXN3-219ENST00000553488 RRP1P56182 461 aaKnown RBP8.41□□□□□ -1.06
ATXN3-219ENST00000553488 ZXDAP98168 799 aa8.41□□□□□ -1.06
ATXN3-219ENST00000553488 ARHGAP4P98171 946 aa8.41□□□□□ -1.06
ATXN3-219ENST00000553488 CTBSQ01459 385 aa8.41□□□□□ -1.06
ATXN3-219ENST00000553488 COASYQ13057 564 aa8.41□□□□□ -1.06
ATXN3-219ENST00000553488 ARSJQ5FYB0 599 aaPredicted RBP8.41□□□□□ -1.06
ATXN3-219ENST00000553488 FBXO47Q5MNV8 452 aa8.41□□□□□ -1.06
ATXN3-219ENST00000553488 CYFIP1Q7L576 1253 aa8.41□□□□□ -1.06
ATXN3-219ENST00000553488 EFHBQ8N7U6 833 aa8.41□□□□□ -1.06
ATXN3-219ENST00000553488 ASIC4Q96FT7 647 aa8.41□□□□□ -1.06
ATXN3-219ENST00000553488 IGFLR1Q9H665 355 aa8.41□□□□□ -1.06
ATXN3-219ENST00000553488 ZSWIM5Q9P217 1185 aa8.41□□□□□ -1.06
ATXN3-219ENST00000553488 ZNF215Q9UL58 517 aaPredicted RBP8.41□□□□□ -1.06
ATXN3-219ENST00000553488 NRCAMQ92823 1304 aa8.4□□□□□ -1.06
ATXN3-219ENST00000553488 MBLAC1A4D2B0 266 aaPredicted RBP8.4□□□□□ -1.06
ATXN3-219ENST00000553488 GCOM1H8Y6P7 765 aaPredicted RBP8.4□□□□□ -1.06
ATXN3-219ENST00000553488 ENPP3O14638 875 aa8.4□□□□□ -1.06
ATXN3-219ENST00000553488 FIBPO43427 364 aa8.4□□□□□ -1.06
ATXN3-219ENST00000553488 CYTH3O43739 400 aa8.4□□□□□ -1.06
ATXN3-219ENST00000553488 STAM2O75886 525 aa8.4□□□□□ -1.06
ATXN3-219ENST00000553488 POLR2MP0CAP2 368 aa8.4□□□□□ -1.06
ATXN3-219ENST00000553488 MAPTP10636 758 aaKnown RBP8.4□□□□□ -1.06
ATXN3-219ENST00000553488 GNAT1P11488 350 aa8.4□□□□□ -1.06
ATXN3-219ENST00000553488 SDSP20132 328 aa8.4□□□□□ -1.06
ATXN3-219ENST00000553488 NDUFV1P49821 464 aa8.4□□□□□ -1.06
ATXN3-219ENST00000553488 BTG3Q14201 252 aaPredicted RBP8.4□□□□□ -1.06
ATXN3-219ENST00000553488 NEDD9Q14511 834 aa8.4□□□□□ -1.06
ATXN3-219ENST00000553488 PKN1Q16512 942 aa8.4□□□□□ -1.06
ATXN3-219ENST00000553488 GNPTABQ3T906 1256 aa8.4□□□□□ -1.06
ATXN3-219ENST00000553488 ANKRD45Q5TZF3 282 aa8.4□□□□□ -1.06
ATXN3-219ENST00000553488 TAF2Q6P1X5 1199 aa8.4□□□□□ -1.06
ATXN3-219ENST00000553488 C1orf229Q6ZS94 237 aaPredicted RBP8.4□□□□□ -1.06
ATXN3-219ENST00000553488 TSHZ1Q6ZSZ6 1077 aa8.4□□□□□ -1.06
ATXN3-219ENST00000553488 FCHSD1Q86WN1 690 aa8.4□□□□□ -1.06
ATXN3-219ENST00000553488 CMTR2Q8IYT2 770 aaKnown RBP8.4□□□□□ -1.06
ATXN3-219ENST00000553488 FBXL6Q8N531 539 aa8.4□□□□□ -1.06
ATXN3-219ENST00000553488 SPPL3Q8TCT6 385 aa8.4□□□□□ -1.06
ATXN3-219ENST00000553488 SUSD6Q92537 303 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms