RNA–Protein interactions for RNA: ENST00000551260.5

RACGAP1-223, Transcript of Rac GTPase activating protein 1, human

TSL 4

Gene RACGAP1, Length 555 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RACGAP1-223	ENST00000551260	STXBP2	Q15833	593 aa		6.93	□□□□□ -1.3
RACGAP1-223	ENST00000551260	USH1G	Q495M9	461 aa		6.93	□□□□□ -1.3
RACGAP1-223	ENST00000551260	CELF3	Q5SZQ8	465 aa	Known RBP	6.93	□□□□□ -1.3
RACGAP1-223	ENST00000551260	DCLRE1A	Q6PJP8	1040 aa		6.93	□□□□□ -1.3
RACGAP1-223	ENST00000551260	TSHZ1	Q6ZSZ6	1077 aa		6.93	□□□□□ -1.3
RACGAP1-223	ENST00000551260	CCDC149	Q6ZUS6	474 aa		6.93	□□□□□ -1.3
RACGAP1-223	ENST00000551260	OTOP3	Q7RTS5	596 aa		6.93	□□□□□ -1.3
RACGAP1-223	ENST00000551260	AACS	Q86V21	672 aa		6.93	□□□□□ -1.3
RACGAP1-223	ENST00000551260	LINC00528	Q8N1L1	170 aa		6.93	□□□□□ -1.3
RACGAP1-223	ENST00000551260	LMBR1	Q8WVP7	490 aa		6.93	□□□□□ -1.3
RACGAP1-223	ENST00000551260	AUTS2	Q8WXX7	1259 aa		6.93	□□□□□ -1.3
RACGAP1-223	ENST00000551260	GATA6	Q92908	595 aa		6.93	□□□□□ -1.3
RACGAP1-223	ENST00000551260	ZBTB10	Q96DT7	871 aa		6.93	□□□□□ -1.3
RACGAP1-223	ENST00000551260	PUS7L	Q9H0K6	701 aa	Known RBP	6.93	□□□□□ -1.3
RACGAP1-223	ENST00000551260	TMX1	Q9H3N1	280 aa		6.93	□□□□□ -1.3
RACGAP1-223	ENST00000551260	NGRN	Q9NPE2	291 aa	Known RBP	6.93	□□□□□ -1.3
RACGAP1-223	ENST00000551260	IGSF5	Q9NSI5	407 aa		6.93	□□□□□ -1.3
RACGAP1-223	ENST00000551260	IGSF9	Q9P2J2	1179 aa		6.93	□□□□□ -1.3
RACGAP1-223	ENST00000551260	LRFN2	Q9ULH4	789 aa		6.93	□□□□□ -1.3
RACGAP1-223	ENST00000551260	SYNPO2	Q9UMS6	1093 aa		6.93	□□□□□ -1.3
RACGAP1-223	ENST00000551260	CDY2A	Q9Y6F7	541 aa		6.93	□□□□□ -1.3
RACGAP1-223	ENST00000551260	LAMA5	O15230	3695 aa		6.93	□□□□□ -1.3
RACGAP1-223	ENST00000551260	MYO18B	Q8IUG5	2567 aa		6.93	□□□□□ -1.3
RACGAP1-223	ENST00000551260	PLIN4	Q96Q06	1357 aa		6.93	□□□□□ -1.3
RACGAP1-223	ENST00000551260	HECTD1	Q9ULT8	2610 aa		6.93	□□□□□ -1.3
RACGAP1-223	ENST00000551260	FREM2	Q5SZK8	3169 aa		6.92	□□□□□ -1.3
RACGAP1-223	ENST00000551260	BAZ2B	Q9UIF8	2168 aa	Known RBP	6.92	□□□□□ -1.3
RACGAP1-223	ENST00000551260	KIF26A	Q9ULI4	1882 aa	Predicted RBP	6.92	□□□□□ -1.3
RACGAP1-223	ENST00000551260	KALRN	O60229	2985 aa		6.92	□□□□□ -1.3
RACGAP1-223	ENST00000551260	PLXNB3	Q9ULL4	1909 aa		6.92	□□□□□ -1.3
RACGAP1-223	ENST00000551260	GSG1L2	A8MUP6	293 aa		6.92	□□□□□ -1.3
RACGAP1-223	ENST00000551260		B4DLN1	442 aa		6.92	□□□□□ -1.3
RACGAP1-223	ENST00000551260	GIPC1	O14908	333 aa		6.92	□□□□□ -1.3
RACGAP1-223	ENST00000551260	MGEA5	O60502	916 aa		6.92	□□□□□ -1.3
RACGAP1-223	ENST00000551260	KCNK5	O95279	499 aa		6.92	□□□□□ -1.3
RACGAP1-223	ENST00000551260	STAG3L1	P0CL83	205 aa		6.92	□□□□□ -1.3
RACGAP1-223	ENST00000551260	TSPY3	P0CV98	308 aa		6.92	□□□□□ -1.3
RACGAP1-223	ENST00000551260	TSPY8	P0CW00	308 aa		6.92	□□□□□ -1.3
RACGAP1-223	ENST00000551260	EIF2AK2	P19525	551 aa	Known RBP	6.92	□□□□□ -1.3
RACGAP1-223	ENST00000551260	CD72	P21854	359 aa		6.92	□□□□□ -1.3
RACGAP1-223	ENST00000551260	MRPL12	P52815	198 aa	Known RBP	6.92	□□□□□ -1.3
RACGAP1-223	ENST00000551260	TFAP4	Q01664	338 aa		6.92	□□□□□ -1.3
RACGAP1-223	ENST00000551260	PLCB3	Q01970	1234 aa		6.92	□□□□□ -1.3
RACGAP1-223	ENST00000551260	PTPN14	Q15678	1187 aa		6.92	□□□□□ -1.3
RACGAP1-223	ENST00000551260	CSRP2	Q16527	193 aa		6.92	□□□□□ -1.3
RACGAP1-223	ENST00000551260	ALDH1L2	Q3SY69	923 aa		6.92	□□□□□ -1.3
RACGAP1-223	ENST00000551260	SBK1	Q52WX2	424 aa		6.92	□□□□□ -1.3
RACGAP1-223	ENST00000551260	C6orf118	Q5T5N4	469 aa		6.92	□□□□□ -1.3
RACGAP1-223	ENST00000551260	LAIR1	Q6GTX8	287 aa		6.92	□□□□□ -1.3
RACGAP1-223	ENST00000551260	PSAPL1	Q6NUJ1	521 aa		6.92	□□□□□ -1.3
RACGAP1-223	ENST00000551260	LRRC55	Q6ZSA7	311 aa		6.92	□□□□□ -1.3
RACGAP1-223	ENST00000551260	MRPL43	Q8N983	215 aa	Known RBP	6.92	□□□□□ -1.3
RACGAP1-223	ENST00000551260	NEDD1	Q8NHV4	660 aa		6.92	□□□□□ -1.3
RACGAP1-223	ENST00000551260	DNAJB3	Q8WWF6	145 aa		6.92	□□□□□ -1.3
RACGAP1-223	ENST00000551260	DDX1	Q92499	740 aa	Known RBP	6.92	□□□□□ -1.3
RACGAP1-223	ENST00000551260	MYADM	Q96S97	322 aa		6.92	□□□□□ -1.3
RACGAP1-223	ENST00000551260	GPR20	Q99678	358 aa		6.92	□□□□□ -1.3
RACGAP1-223	ENST00000551260	WASF3	Q9UPY6	502 aa		6.92	□□□□□ -1.3
RACGAP1-223	ENST00000551260	LZTS1	Q9Y250	596 aa		6.92	□□□□□ -1.3
RACGAP1-223	ENST00000551260	PCNX2	A6NKB5	2137 aa		6.92	□□□□□ -1.3
RACGAP1-223	ENST00000551260	ASXL3	Q9C0F0	2248 aa		6.92	□□□□□ -1.3
RACGAP1-223	ENST00000551260	USP9X	Q93008	2570 aa	Predicted RBP	6.91	□□□□□ -1.3
RACGAP1-223	ENST00000551260	ASCC3	Q8N3C0	2202 aa	Known RBP	6.91	□□□□□ -1.3
RACGAP1-223	ENST00000551260	PIEZO2	Q9H5I5	2752 aa		6.91	□□□□□ -1.3
RACGAP1-223	ENST00000551260	FGFR1	P11362	822 aa		6.91	□□□□□ -1.3
RACGAP1-223	ENST00000551260	UBA1	P22314	1058 aa	Known RBP	6.91	□□□□□ -1.3
RACGAP1-223	ENST00000551260	GBP2	P32456	591 aa	Predicted RBP	6.91	□□□□□ -1.3
RACGAP1-223	ENST00000551260	ADD1	P35611	737 aa	Known RBP	6.91	□□□□□ -1.3
RACGAP1-223	ENST00000551260	STARD6	P59095	220 aa		6.91	□□□□□ -1.3
RACGAP1-223	ENST00000551260	TMEM62	Q0P6H9	643 aa		6.91	□□□□□ -1.3
RACGAP1-223	ENST00000551260	SNW1	Q13573	536 aa	Known RBP	6.91	□□□□□ -1.3
RACGAP1-223	ENST00000551260	SMC1A	Q14683	1233 aa	Known RBP	6.91	□□□□□ -1.3
RACGAP1-223	ENST00000551260	UBXN2B	Q14CS0	331 aa		6.91	□□□□□ -1.3
RACGAP1-223	ENST00000551260	SF3A2	Q15428	464 aa	Known RBP	6.91	□□□□□ -1.3
RACGAP1-223	ENST00000551260	TMEM266	Q2M3C6	531 aa		6.91	□□□□□ -1.3
RACGAP1-223	ENST00000551260	LETM2	Q2VYF4	491 aa		6.91	□□□□□ -1.3
RACGAP1-223	ENST00000551260	LCE2A	Q5TA79	106 aa	Predicted RBP	6.91	□□□□□ -1.3
RACGAP1-223	ENST00000551260	GPR149	Q86SP6	731 aa		6.91	□□□□□ -1.3
RACGAP1-223	ENST00000551260	PDZD3	Q86UT5	571 aa		6.91	□□□□□ -1.3
RACGAP1-223	ENST00000551260	SYTL5	Q8TDW5	730 aa	Predicted RBP	6.91	□□□□□ -1.3
RACGAP1-223	ENST00000551260	SSH3	Q8TE77	659 aa		6.91	□□□□□ -1.3
RACGAP1-223	ENST00000551260	NSUN6	Q8TEA1	469 aa	Known RBP	6.91	□□□□□ -1.3
RACGAP1-223	ENST00000551260	SLC22A17	Q8WUG5	538 aa		6.91	□□□□□ -1.3
RACGAP1-223	ENST00000551260	BORCS6	Q96GS4	357 aa		6.91	□□□□□ -1.3
RACGAP1-223	ENST00000551260	RMDN3	Q96TC7	470 aa		6.91	□□□□□ -1.3
RACGAP1-223	ENST00000551260	BCO2	Q9BYV7	579 aa		6.91	□□□□□ -1.3
RACGAP1-223	ENST00000551260	API5	Q9BZZ5	524 aa	Known RBP	6.91	□□□□□ -1.3
RACGAP1-223	ENST00000551260	BCL11A	Q9H165	835 aa		6.91	□□□□□ -1.3
RACGAP1-223	ENST00000551260	C1orf115	Q9H7X2	142 aa		6.91	□□□□□ -1.3
RACGAP1-223	ENST00000551260	EPB41L4A	Q9HCS5	686 aa	Predicted RBP	6.91	□□□□□ -1.3
RACGAP1-223	ENST00000551260	PRM3	Q9NNZ6	103 aa		6.91	□□□□□ -1.3
RACGAP1-223	ENST00000551260	IL1RAPL2	Q9NP60	686 aa		6.91	□□□□□ -1.3
RACGAP1-223	ENST00000551260	IL17RB	Q9NRM6	502 aa		6.91	□□□□□ -1.3
RACGAP1-223	ENST00000551260	PUF60	Q9UHX1	559 aa	Known RBP	6.91	□□□□□ -1.3
RACGAP1-223	ENST00000551260	RAB23	Q9ULC3	237 aa		6.91	□□□□□ -1.3
RACGAP1-223	ENST00000551260	PADI3	Q9ULW8	664 aa		6.91	□□□□□ -1.3
RACGAP1-223	ENST00000551260	PCDHB7	Q9Y5E2	793 aa		6.91	□□□□□ -1.3
RACGAP1-223	ENST00000551260	ADAMTS9	Q9P2N4	1935 aa		6.91	□□□□□ -1.3
RACGAP1-223	ENST00000551260	MYH9	P35579	1960 aa	Known RBP	6.91	□□□□□ -1.3
RACGAP1-223	ENST00000551260	KANSL1L	A0AUZ9	987 aa		6.9	□□□□□ -1.3

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