RNA–Protein interactions for RNA: ENST00000550188.1

ARFGAP1-223, Transcript of ADP ribosylation factor GTPase activating protein 1, human

TSL 5

Gene ARFGAP1, Length 572 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARFGAP1-223	ENST00000550188	PTPRS	Q13332	1948 aa		13.29	□□□□□ -0.28
ARFGAP1-223	ENST00000550188	MYH9	P35579	1960 aa	Known RBP	13.29	□□□□□ -0.28
ARFGAP1-223	ENST00000550188	LAMA2	P24043	3122 aa	Known RBP	13.28	□□□□□ -0.28
ARFGAP1-223	ENST00000550188		A0A087WWV3	80 aa		13.28	□□□□□ -0.28
ARFGAP1-223	ENST00000550188	ARHGEF35	A5YM69	484 aa		13.28	□□□□□ -0.28
ARFGAP1-223	ENST00000550188	RFXAP	O00287	272 aa		13.28	□□□□□ -0.28
ARFGAP1-223	ENST00000550188	CSDE1	O75534	798 aa	Known RBP	13.28	□□□□□ -0.28
ARFGAP1-223	ENST00000550188	SRGAP2C	P0DJJ0	459 aa		13.28	□□□□□ -0.28
ARFGAP1-223	ENST00000550188	POU3F3	P20264	500 aa	Predicted RBP	13.28	□□□□□ -0.28
ARFGAP1-223	ENST00000550188	IBSP	P21815	317 aa	Predicted RBP	13.28	□□□□□ -0.28
ARFGAP1-223	ENST00000550188	PHKA2	P46019	1235 aa		13.28	□□□□□ -0.28
ARFGAP1-223	ENST00000550188	FAM189B	P81408	668 aa		13.28	□□□□□ -0.28
ARFGAP1-223	ENST00000550188	GRB10	Q13322	594 aa		13.28	□□□□□ -0.28
ARFGAP1-223	ENST00000550188	TFDP1	Q14186	410 aa		13.28	□□□□□ -0.28
ARFGAP1-223	ENST00000550188	IL17A	Q16552	155 aa		13.28	□□□□□ -0.28
ARFGAP1-223	ENST00000550188	CATSPER4	Q7RTX7	472 aa		13.28	□□□□□ -0.28
ARFGAP1-223	ENST00000550188	SRGAP1	Q7Z6B7	1085 aa		13.28	□□□□□ -0.28
ARFGAP1-223	ENST00000550188	RNF149	Q8NC42	400 aa		13.28	□□□□□ -0.28
ARFGAP1-223	ENST00000550188	SPRYD3	Q8NCJ5	442 aa		13.28	□□□□□ -0.28
ARFGAP1-223	ENST00000550188	MCPH1	Q8NEM0	835 aa		13.28	□□□□□ -0.28
ARFGAP1-223	ENST00000550188	GDPD5	Q8WTR4	605 aa		13.28	□□□□□ -0.28
ARFGAP1-223	ENST00000550188	ZSCAN16	Q9H4T2	348 aa	Predicted RBP	13.28	□□□□□ -0.28
ARFGAP1-223	ENST00000550188	ELAC1	Q9H777	363 aa	Known RBP	13.28	□□□□□ -0.28
ARFGAP1-223	ENST00000550188	TMEM161A	Q9NX61	479 aa		13.28	□□□□□ -0.28
ARFGAP1-223	ENST00000550188	ATP6V1D	Q9Y5K8	247 aa		13.28	□□□□□ -0.28
ARFGAP1-223	ENST00000550188	CDH23	Q9H251	3354 aa		13.28	□□□□□ -0.28
ARFGAP1-223	ENST00000550188	GBF1	Q92538	1859 aa		13.27	□□□□□ -0.28
ARFGAP1-223	ENST00000550188	PP2D1	A8MPX8	630 aa		13.27	□□□□□ -0.29
ARFGAP1-223	ENST00000550188	ARL2	P36404	184 aa		13.27	□□□□□ -0.29
ARFGAP1-223	ENST00000550188	POU5F1B	Q06416	359 aa		13.27	□□□□□ -0.29
ARFGAP1-223	ENST00000550188	ECM1	Q16610	540 aa		13.27	□□□□□ -0.29
ARFGAP1-223	ENST00000550188	EPC2	Q52LR7	807 aa		13.27	□□□□□ -0.29
ARFGAP1-223	ENST00000550188	TMEM192	Q8IY95	271 aa		13.27	□□□□□ -0.29
ARFGAP1-223	ENST00000550188	CLP1	Q92989	425 aa	Known RBP	13.27	□□□□□ -0.29
ARFGAP1-223	ENST00000550188	POLR3F	Q9H1D9	316 aa	Predicted RBP	13.27	□□□□□ -0.29
ARFGAP1-223	ENST00000550188	KIAA1024	Q9UPX6	916 aa		13.27	□□□□□ -0.29
ARFGAP1-223	ENST00000550188	PIN4	Q9Y237	131 aa	Known RBP	13.27	□□□□□ -0.29
ARFGAP1-223	ENST00000550188		A0A0U1RQF3	1178 aa		13.26	□□□□□ -0.29
ARFGAP1-223	ENST00000550188	VWA3A	A6NCI4	1184 aa		13.26	□□□□□ -0.29
ARFGAP1-223	ENST00000550188	HOXA2	O43364	376 aa		13.26	□□□□□ -0.29
ARFGAP1-223	ENST00000550188	LPXN	O60711	386 aa		13.26	□□□□□ -0.29
ARFGAP1-223	ENST00000550188	CTNNB1	P35222	781 aa		13.26	□□□□□ -0.29
ARFGAP1-223	ENST00000550188	REST	Q13127	1097 aa		13.26	□□□□□ -0.29
ARFGAP1-223	ENST00000550188	CAPS	Q13938	189 aa		13.26	□□□□□ -0.29
ARFGAP1-223	ENST00000550188	PCBP1	Q15365	356 aa	Known RBP eCLIP	13.26	□□□□□ -0.29
ARFGAP1-223	ENST00000550188	PAN2	Q504Q3	1202 aa	Known RBP	13.26	□□□□□ -0.29
ARFGAP1-223	ENST00000550188	TWF2	Q6IBS0	349 aa	Known RBP	13.26	□□□□□ -0.29
ARFGAP1-223	ENST00000550188	PADI6	Q6TGC4	694 aa		13.26	□□□□□ -0.29
ARFGAP1-223	ENST00000550188	ECHDC2	Q86YB7	292 aa		13.26	□□□□□ -0.29
ARFGAP1-223	ENST00000550188	ASAP3	Q8TDY4	903 aa		13.26	□□□□□ -0.29
ARFGAP1-223	ENST00000550188	AK8	Q96MA6	479 aa		13.26	□□□□□ -0.29
ARFGAP1-223	ENST00000550188	TRAIP	Q9BWF2	469 aa		13.26	□□□□□ -0.29
ARFGAP1-223	ENST00000550188	NFKBIZ	Q9BYH8	718 aa		13.26	□□□□□ -0.29
ARFGAP1-223	ENST00000550188	BHMT2	Q9H2M3	363 aa		13.26	□□□□□ -0.29
ARFGAP1-223	ENST00000550188	MINDY3	Q9H8M7	445 aa		13.26	□□□□□ -0.29
ARFGAP1-223	ENST00000550188	AGPAT5	Q9NUQ2	364 aa		13.26	□□□□□ -0.29
ARFGAP1-223	ENST00000550188	DDX19A	Q9NUU7	478 aa	Known RBP	13.26	□□□□□ -0.29
ARFGAP1-223	ENST00000550188	LMCD1	Q9NZU5	365 aa		13.26	□□□□□ -0.29
ARFGAP1-223	ENST00000550188	DNM3	Q9UQ16	869 aa		13.26	□□□□□ -0.29
ARFGAP1-223	ENST00000550188	MTMR6	Q9Y217	621 aa		13.26	□□□□□ -0.29
ARFGAP1-223	ENST00000550188	MTCH2	Q9Y6C9	303 aa		13.26	□□□□□ -0.29
ARFGAP1-223	ENST00000550188	MRPL42	Q9Y6G3	142 aa	Known RBP	13.26	□□□□□ -0.29
ARFGAP1-223	ENST00000550188	C5orf67	F2Z3F1	127 aa		13.25	□□□□□ -0.29
ARFGAP1-223	ENST00000550188		H3BNC9	293 aa		13.25	□□□□□ -0.29
ARFGAP1-223	ENST00000550188	ERLIN2	O94905	339 aa		13.25	□□□□□ -0.29
ARFGAP1-223	ENST00000550188	RB1	P06400	928 aa		13.25	□□□□□ -0.29
ARFGAP1-223	ENST00000550188	LINC00271	P0C7V0	271 aa		13.25	□□□□□ -0.29
ARFGAP1-223	ENST00000550188	FGFR1	P11362	822 aa		13.25	□□□□□ -0.29
ARFGAP1-223	ENST00000550188	SKI	P12755	728 aa		13.25	□□□□□ -0.29
ARFGAP1-223	ENST00000550188	CYP11B2	P19099	503 aa		13.25	□□□□□ -0.29
ARFGAP1-223	ENST00000550188	GLRA2	P23416	452 aa		13.25	□□□□□ -0.29
ARFGAP1-223	ENST00000550188	CDC25A	P30304	524 aa		13.25	□□□□□ -0.29
ARFGAP1-223	ENST00000550188	BMPR1A	P36894	532 aa		13.25	□□□□□ -0.29
ARFGAP1-223	ENST00000550188	GATM	P50440	423 aa		13.25	□□□□□ -0.29
ARFGAP1-223	ENST00000550188	RAB27A	P51159	221 aa		13.25	□□□□□ -0.29
ARFGAP1-223	ENST00000550188	PTEN	P60484	403 aa		13.25	□□□□□ -0.29
ARFGAP1-223	ENST00000550188	SF3A1	Q15459	793 aa	Known RBP	13.25	□□□□□ -0.29
ARFGAP1-223	ENST00000550188	FAM102B	Q5T8I3	360 aa		13.25	□□□□□ -0.29
ARFGAP1-223	ENST00000550188	MAEA	Q7L5Y9	396 aa		13.25	□□□□□ -0.29
ARFGAP1-223	ENST00000550188	IFNLR1	Q8IU57	520 aa	Predicted RBP	13.25	□□□□□ -0.29
ARFGAP1-223	ENST00000550188	MICALL1	Q8N3F8	863 aa		13.25	□□□□□ -0.29
ARFGAP1-223	ENST00000550188	KCTD17	Q8N5Z5	321 aa		13.25	□□□□□ -0.29
ARFGAP1-223	ENST00000550188	RNF169	Q8NCN4	708 aa		13.25	□□□□□ -0.29
ARFGAP1-223	ENST00000550188	PPM1E	Q8WY54	764 aa		13.25	□□□□□ -0.29
ARFGAP1-223	ENST00000550188	MMTAG2	Q9BU76	263 aa	Known RBP	13.25	□□□□□ -0.29
ARFGAP1-223	ENST00000550188	C11orf84	Q9BUA3	381 aa	Predicted RBP	13.25	□□□□□ -0.29
ARFGAP1-223	ENST00000550188	GPRC5C	Q9NQ84	441 aa		13.25	□□□□□ -0.29
ARFGAP1-223	ENST00000550188	WDR81	Q562E7	1941 aa		13.24	□□□□□ -0.29
ARFGAP1-223	ENST00000550188	TBKBP1	A7MCY6	615 aa		13.24	□□□□□ -0.29
ARFGAP1-223	ENST00000550188	EYA4	O95677	639 aa		13.24	□□□□□ -0.29
ARFGAP1-223	ENST00000550188	EOMES	O95936	686 aa		13.24	□□□□□ -0.29
ARFGAP1-223	ENST00000550188	NCBP1	Q09161	790 aa	Known RBP	13.24	□□□□□ -0.29
ARFGAP1-223	ENST00000550188	CCDC85B	Q15834	202 aa	Predicted RBP	13.24	□□□□□ -0.29
ARFGAP1-223	ENST00000550188	PTPRO	Q16827	1216 aa		13.24	□□□□□ -0.29
ARFGAP1-223	ENST00000550188	HYI	Q5T013	277 aa		13.24	□□□□□ -0.29
ARFGAP1-223	ENST00000550188	ABI1	Q8IZP0	508 aa		13.24	□□□□□ -0.29
ARFGAP1-223	ENST00000550188	CDK5RAP3	Q96JB5	506 aa		13.24	□□□□□ -0.29
ARFGAP1-223	ENST00000550188	PLVAP	Q9BX97	442 aa		13.24	□□□□□ -0.29
ARFGAP1-223	ENST00000550188	TMEM117	Q9H0C3	514 aa		13.24	□□□□□ -0.29
ARFGAP1-223	ENST00000550188	NT5C3A	Q9H0P0	336 aa		13.24	□□□□□ -0.29

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