RNA–Protein interactions for RNA: ENST00000550104.5

ATXN2-219, Transcript of ataxin 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ATXN2, Length 4,648 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN2-219ENST00000550104 HOXC10Q9NYD6 342 aa18.21■□□□□ 0.51
ATXN2-219ENST00000550104 HSPBP1Q9NZL4 362 aa18.21■□□□□ 0.51
ATXN2-219ENST00000550104 USP54Q70EL1 1684 aa18.21■□□□□ 0.51
ATXN2-219ENST00000550104 PPP1R11O60927 126 aaPredicted RBP18.21■□□□□ 0.5
ATXN2-219ENST00000550104 ABL1P00519 1130 aa18.21■□□□□ 0.5
ATXN2-219ENST00000550104 CD58P19256 250 aa18.21■□□□□ 0.5
ATXN2-219ENST00000550104 HNRNPH2P55795 449 aaKnown RBP18.21■□□□□ 0.5
ATXN2-219ENST00000550104 DR1Q01658 176 aa18.21■□□□□ 0.5
ATXN2-219ENST00000550104 STXBP2Q15833 593 aa18.21■□□□□ 0.5
ATXN2-219ENST00000550104 RIN2Q8WYP3 895 aaPredicted RBP18.21■□□□□ 0.5
ATXN2-219ENST00000550104 SAMD15Q9P1V8 674 aa18.21■□□□□ 0.5
ATXN2-219ENST00000550104 APEX2Q9UBZ4 518 aa18.21■□□□□ 0.5
ATXN2-219ENST00000550104 NEBLO76041 1014 aa18.2■□□□□ 0.5
ATXN2-219ENST00000550104 ALS2CLQ60I27 953 aa18.2■□□□□ 0.5
ATXN2-219ENST00000550104 TRIM59Q8IWR1 403 aa18.2■□□□□ 0.5
ATXN2-219ENST00000550104 PROCA1Q8NCQ7 364 aaPredicted RBP18.2■□□□□ 0.5
ATXN2-219ENST00000550104 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.2■□□□□ 0.5
ATXN2-219ENST00000550104 STK33Q9BYT3 514 aa18.2■□□□□ 0.5
ATXN2-219ENST00000550104 CCDC188H7C350 402 aa18.2■□□□□ 0.5
ATXN2-219ENST00000550104 TNNC2P02585 160 aa18.2■□□□□ 0.5
ATXN2-219ENST00000550104 ARHGAP25P42331 645 aa18.2■□□□□ 0.5
ATXN2-219ENST00000550104 DEFB129Q9H1M3 183 aa18.2■□□□□ 0.5
ATXN2-219ENST00000550104 NOC2LQ9Y3T9 749 aaKnown RBP18.2■□□□□ 0.5
ATXN2-219ENST00000550104 NFIBO00712 420 aa18.2■□□□□ 0.5
ATXN2-219ENST00000550104 MEIS2O14770 477 aa18.2■□□□□ 0.5
ATXN2-219ENST00000550104 PBX1P40424 430 aa18.2■□□□□ 0.5
ATXN2-219ENST00000550104 GPC5P78333 572 aa18.2■□□□□ 0.5
ATXN2-219ENST00000550104 LMBRD2Q68DH5 695 aaPredicted RBP18.2■□□□□ 0.5
ATXN2-219ENST00000550104 DNAAF5Q86Y56 855 aa18.2■□□□□ 0.5
ATXN2-219ENST00000550104 ATG4CQ96DT6 458 aa18.2■□□□□ 0.5
ATXN2-219ENST00000550104 PACSIN1Q9BY11 444 aa18.2■□□□□ 0.5
ATXN2-219ENST00000550104 AGPAT3Q9NRZ7 376 aa18.2■□□□□ 0.5
ATXN2-219ENST00000550104 PASKQ96RG2 1323 aa18.2■□□□□ 0.5
ATXN2-219ENST00000550104 EML1O00423 815 aa18.19■□□□□ 0.5
ATXN2-219ENST00000550104 ZBTB39O15060 712 aa18.19■□□□□ 0.5
ATXN2-219ENST00000550104 PON1P27169 355 aa18.19■□□□□ 0.5
ATXN2-219ENST00000550104 NAB2Q15742 525 aa18.19■□□□□ 0.5
ATXN2-219ENST00000550104 KRT39Q6A163 491 aa18.19■□□□□ 0.5
ATXN2-219ENST00000550104 CCNI2Q6ZMN8 369 aaPredicted RBP18.19■□□□□ 0.5
ATXN2-219ENST00000550104 MGARPQ8TDB4 240 aa18.19■□□□□ 0.5
ATXN2-219ENST00000550104 RFFLQ8WZ73 363 aa18.19■□□□□ 0.5
ATXN2-219ENST00000550104 FUT8Q9BYC5 575 aa18.19■□□□□ 0.5
ATXN2-219ENST00000550104 EIF3DO15371 548 aaKnown RBP eCLIP18.19■□□□□ 0.5
ATXN2-219ENST00000550104 NR3C2P08235 984 aa18.19■□□□□ 0.5
ATXN2-219ENST00000550104 LACTBP83111 547 aaPredicted RBP18.19■□□□□ 0.5
ATXN2-219ENST00000550104 SGO2Q562F6 1265 aa18.19■□□□□ 0.5
ATXN2-219ENST00000550104 AGBL3Q8NEM8 1001 aa18.19■□□□□ 0.5
ATXN2-219ENST00000550104 MKL1Q969V6 931 aa18.19■□□□□ 0.5
ATXN2-219ENST00000550104 CDK17Q00537 523 aa18.19■□□□□ 0.5
ATXN2-219ENST00000550104 SYN2Q92777 582 aaPredicted RBP18.19■□□□□ 0.5
ATXN2-219ENST00000550104 CABS1Q96KC9 395 aa18.19■□□□□ 0.5
ATXN2-219ENST00000550104 PPP1R16BQ96T49 567 aa18.19■□□□□ 0.5
ATXN2-219ENST00000550104 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.19■□□□□ 0.54e-9■■□□□ 12.6
ATXN2-219ENST00000550104 ACAD9Q9H845 621 aa18.19■□□□□ 0.5
ATXN2-219ENST00000550104 RAB20Q9NX57 234 aa18.19■□□□□ 0.5
ATXN2-219ENST00000550104 NKIRAS1Q9NYS0 192 aa18.19■□□□□ 0.5
ATXN2-219ENST00000550104 PLSCR1O15162 318 aa18.19■□□□□ 0.5
ATXN2-219ENST00000550104 EPHB6O15197 1021 aa18.19■□□□□ 0.5
ATXN2-219ENST00000550104 ICAM1P05362 532 aa18.19■□□□□ 0.5
ATXN2-219ENST00000550104 INPP5BP32019 993 aa18.19■□□□□ 0.5
ATXN2-219ENST00000550104 GMPSP49915 693 aaPredicted RBP18.19■□□□□ 0.5
ATXN2-219ENST00000550104 CXCL9Q07325 125 aa18.19■□□□□ 0.5
ATXN2-219ENST00000550104 CNOT8Q9UFF9 292 aaKnown RBP18.19■□□□□ 0.5
ATXN2-219ENST00000550104 MARF1Q9Y4F3 1742 aaKnown RBP18.19■□□□□ 0.5
ATXN2-219ENST00000550104 UAP1Q16222 522 aaPredicted RBP18.18■□□□□ 0.5
ATXN2-219ENST00000550104 ECM1Q16610 540 aa18.18■□□□□ 0.5
ATXN2-219ENST00000550104 SLC35G1Q2M3R5 365 aa18.18■□□□□ 0.5
ATXN2-219ENST00000550104 MIIPQ5JXC2 388 aa18.18■□□□□ 0.5
ATXN2-219ENST00000550104 FMO2Q99518 471 aa18.18■□□□□ 0.5
ATXN2-219ENST00000550104 POLR3FQ9H1D9 316 aaPredicted RBP18.18■□□□□ 0.5
ATXN2-219ENST00000550104 KCND2Q9NZV8 630 aa18.18■□□□□ 0.5
ATXN2-219ENST00000550104 NXF1Q9UBU9 619 aaKnown RBP18.18■□□□□ 0.5
ATXN2-219ENST00000550104 CYP26A1O43174 497 aa18.18■□□□□ 0.5
ATXN2-219ENST00000550104 PLS3P13797 630 aa18.18■□□□□ 0.5
ATXN2-219ENST00000550104 BEND6Q5SZJ8 279 aaPredicted RBP18.18■□□□□ 0.5
ATXN2-219ENST00000550104 PAPD7Q5XG87 772 aaKnown RBP18.18■□□□□ 0.5
ATXN2-219ENST00000550104 WDR59Q6PJI9 974 aa18.18■□□□□ 0.5
ATXN2-219ENST00000550104 TRIM6Q9C030 488 aaPredicted RBP18.18■□□□□ 0.5
ATXN2-219ENST00000550104 PLCB1Q9NQ66 1216 aa18.18■□□□□ 0.5
ATXN2-219ENST00000550104 AMACRQ9UHK6 382 aa18.18■□□□□ 0.5
ATXN2-219ENST00000550104 SNX24Q9Y343 169 aa18.18■□□□□ 0.5
ATXN2-219ENST00000550104 SLIT2O94813 1529 aa18.18■□□□□ 0.5
ATXN2-219ENST00000550104 HGSO14964 777 aaPredicted RBP18.18■□□□□ 0.5
ATXN2-219ENST00000550104 GRM1Q13255 1194 aa18.18■□□□□ 0.5
ATXN2-219ENST00000550104 PASD1Q8IV76 773 aa18.18■□□□□ 0.5
ATXN2-219ENST00000550104 ZNF668Q96K58 619 aaPredicted RBP18.18■□□□□ 0.5
ATXN2-219ENST00000550104 KIFC3Q9BVG8 833 aa18.18■□□□□ 0.5
ATXN2-219ENST00000550104 ANKZF1Q9H8Y5 726 aa18.18■□□□□ 0.5
ATXN2-219ENST00000550104 GPRC5CQ9NQ84 441 aa18.18■□□□□ 0.5
ATXN2-219ENST00000550104 PHLPP1O60346 1717 aa18.18■□□□□ 0.5
ATXN2-219ENST00000550104 GRID2IPA4D2P6 1211 aa18.18■□□□□ 0.5
ATXN2-219ENST00000550104 ZNF394Q53GI3 561 aa18.18■□□□□ 0.5
ATXN2-219ENST00000550104 TAB3Q8N5C8 712 aaPredicted RBP18.18■□□□□ 0.5
ATXN2-219ENST00000550104 DNAJC19Q96DA6 116 aa18.18■□□□□ 0.5
ATXN2-219ENST00000550104 AGPAT1Q99943 283 aa18.18■□□□□ 0.5
ATXN2-219ENST00000550104 JPH1Q9HDC5 661 aaPredicted RBP18.18■□□□□ 0.5
ATXN2-219ENST00000550104 ANAPC7Q9UJX3 599 aa18.18■□□□□ 0.5
ATXN2-219ENST00000550104 PLAAQ9Y263 795 aa18.18■□□□□ 0.5
ATXN2-219ENST00000550104 CUL1Q13616 776 aa18.17■□□□□ 0.5
ATXN2-219ENST00000550104 TRIP13Q15645 432 aaPredicted RBP18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms