RNA–Protein interactions for RNA: ENST00000549526.1

SMARCD1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5

Gene SMARCD1, Length 401 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-207ENST00000549526 RNF43Q68DV7 783 aa9.55□□□□□ -0.88
SMARCD1-207ENST00000549526 PARM1Q6UWI2 310 aa9.55□□□□□ -0.88
SMARCD1-207ENST00000549526 ZNF852Q6ZMS4 543 aa9.55□□□□□ -0.88
SMARCD1-207ENST00000549526 TPRG1Q6ZUI0 275 aa9.55□□□□□ -0.88
SMARCD1-207ENST00000549526 CEP68Q76N32 757 aa9.55□□□□□ -0.88
SMARCD1-207ENST00000549526 DDX53Q86TM3 631 aaKnown RBP9.55□□□□□ -0.88
SMARCD1-207ENST00000549526 NME8Q8N427 588 aa9.55□□□□□ -0.88
SMARCD1-207ENST00000549526 RNF169Q8NCN4 708 aa9.55□□□□□ -0.88
SMARCD1-207ENST00000549526 CMASQ8NFW8 434 aaPredicted RBP9.55□□□□□ -0.88
SMARCD1-207ENST00000549526 OTUD7AQ8TE49 926 aaPredicted RBP9.55□□□□□ -0.88
SMARCD1-207ENST00000549526 FGF14Q92915 247 aa9.55□□□□□ -0.88
SMARCD1-207ENST00000549526 PHKBQ93100 1093 aa9.55□□□□□ -0.88
SMARCD1-207ENST00000549526 NAPBQ9H115 298 aa9.55□□□□□ -0.88
SMARCD1-207ENST00000549526 MAN1C1Q9NR34 630 aa9.55□□□□□ -0.88
SMARCD1-207ENST00000549526 MRPS17Q9Y2R5 130 aaKnown RBP9.55□□□□□ -0.88
SMARCD1-207ENST00000549526 SDK1Q7Z5N4 2213 aa9.55□□□□□ -0.88
SMARCD1-207ENST00000549526 TTC41PQ6P2S7 1318 aa9.55□□□□□ -0.88
SMARCD1-207ENST00000549526 KDM3AQ9Y4C1 1321 aa9.55□□□□□ -0.88
SMARCD1-207ENST00000549526 CHURC1-FNTBB4DL54 471 aa9.54□□□□□ -0.88
SMARCD1-207ENST00000549526 DHX16O60231 1041 aaKnown RBP9.54□□□□□ -0.88
SMARCD1-207ENST00000549526 SSBP05455 408 aaKnown RBP eCLIP9.54□□□□□ -0.88
SMARCD1-207ENST00000549526 CNPP09543 421 aaKnown RBP9.54□□□□□ -0.88
SMARCD1-207ENST00000549526 MX1P20591 662 aa9.54□□□□□ -0.88
SMARCD1-207ENST00000549526 HOXA13P31271 388 aaPredicted RBP9.54□□□□□ -0.88
SMARCD1-207ENST00000549526 FNTBP49356 437 aa9.54□□□□□ -0.88
SMARCD1-207ENST00000549526 FZD5Q13467 585 aa9.54□□□□□ -0.88
SMARCD1-207ENST00000549526 GPATCH4Q5T3I0 446 aaKnown RBP9.54□□□□□ -0.88
SMARCD1-207ENST00000549526 LARP1BQ659C4 914 aaKnown RBP9.54□□□□□ -0.88
SMARCD1-207ENST00000549526 ELMSAN1Q6PJG2 1045 aa9.54□□□□□ -0.88
SMARCD1-207ENST00000549526 ADGRF4Q8IZF3 695 aa9.54□□□□□ -0.88
SMARCD1-207ENST00000549526 APPBP2Q92624 585 aa9.54□□□□□ -0.88
SMARCD1-207ENST00000549526 RWDD1Q9H446 243 aaPredicted RBP9.54□□□□□ -0.88
SMARCD1-207ENST00000549526 CDHR5Q9HBB8 845 aa9.54□□□□□ -0.88
SMARCD1-207ENST00000549526 VAT1LQ9HCJ6 419 aa9.54□□□□□ -0.88
SMARCD1-207ENST00000549526 TOMM22Q9NS69 142 aa9.54□□□□□ -0.88
SMARCD1-207ENST00000549526 RNF19AQ9NV58 838 aa9.54□□□□□ -0.88
SMARCD1-207ENST00000549526 CACNA2D2Q9NY47 1150 aa9.54□□□□□ -0.88
SMARCD1-207ENST00000549526 RTEL1Q9NZ71 1219 aa9.54□□□□□ -0.88
SMARCD1-207ENST00000549526 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.54□□□□□ -0.88
SMARCD1-207ENST00000549526 PCDHA2Q9Y5H9 948 aa9.54□□□□□ -0.88
SMARCD1-207ENST00000549526 KALRNO60229 2985 aa9.53□□□□□ -0.88
SMARCD1-207ENST00000549526 M0R2C6 588 aa9.53□□□□□ -0.88
SMARCD1-207ENST00000549526 RFPL2O75678 378 aa9.53□□□□□ -0.88
SMARCD1-207ENST00000549526 CCR3P51677 355 aa9.53□□□□□ -0.88
SMARCD1-207ENST00000549526 IRX6P78412 446 aaPredicted RBP9.53□□□□□ -0.88
SMARCD1-207ENST00000549526 QRICH1Q2TAL8 776 aa9.53□□□□□ -0.88
SMARCD1-207ENST00000549526 SH3PXD2AQ5TCZ1 1133 aa9.53□□□□□ -0.88
SMARCD1-207ENST00000549526 HEATR6Q6AI08 1181 aaKnown RBP9.53□□□□□ -0.88
SMARCD1-207ENST00000549526 B4GALNT3Q6L9W6 998 aa9.53□□□□□ -0.88
SMARCD1-207ENST00000549526 KIAA1211LQ6NV74 962 aa9.53□□□□□ -0.88
SMARCD1-207ENST00000549526 FCHSD1Q86WN1 690 aa9.53□□□□□ -0.88
SMARCD1-207ENST00000549526 TMEM173Q86WV6 379 aaPredicted RBP9.53□□□□□ -0.88
SMARCD1-207ENST00000549526 PROSER1Q86XN7 944 aa9.53□□□□□ -0.88
SMARCD1-207ENST00000549526 KBTBD3Q8NAB2 608 aa9.53□□□□□ -0.88
SMARCD1-207ENST00000549526 HELQQ8TDG4 1101 aa9.53□□□□□ -0.88
SMARCD1-207ENST00000549526 HNRNPABQ99729 332 aaKnown RBP9.53□□□□□ -0.88
SMARCD1-207ENST00000549526 MKNK1Q9BUB5 465 aa9.53□□□□□ -0.88
SMARCD1-207ENST00000549526 SMARCAD1Q9H4L7 1026 aa9.53□□□□□ -0.88
SMARCD1-207ENST00000549526 MAP3K20Q9NYL2 800 aaKnown RBP9.53□□□□□ -0.88
SMARCD1-207ENST00000549526 DPP7Q9UHL4 492 aa9.53□□□□□ -0.88
SMARCD1-207ENST00000549526 NDRG2Q9UN36 371 aaKnown RBP9.53□□□□□ -0.88
SMARCD1-207ENST00000549526 NEUROG3Q9Y4Z2 214 aa9.53□□□□□ -0.88
SMARCD1-207ENST00000549526 ZFP37Q9Y6Q3 630 aaPredicted RBP9.53□□□□□ -0.88
SMARCD1-207ENST00000549526 SMIM35A0A1B0GVV1 85 aa9.52□□□□□ -0.89
SMARCD1-207ENST00000549526 RNF113AO15541 343 aaKnown RBP9.52□□□□□ -0.89
SMARCD1-207ENST00000549526 FIBPO43427 364 aa9.52□□□□□ -0.89
SMARCD1-207ENST00000549526 HYAL3O43820 417 aaPredicted RBP9.52□□□□□ -0.89
SMARCD1-207ENST00000549526 ZC3H11AO75152 810 aaKnown RBP eCLIP9.52□□□□□ -0.89
SMARCD1-207ENST00000549526 SPATA31D3P0C874 917 aa9.52□□□□□ -0.89
SMARCD1-207ENST00000549526 SNHG28P0DPA3 235 aa9.52□□□□□ -0.89
SMARCD1-207ENST00000549526 CXCL12P48061 93 aa9.52□□□□□ -0.89
SMARCD1-207ENST00000549526 TROAPQ12815 778 aa9.52□□□□□ -0.89
SMARCD1-207ENST00000549526 RRP12Q5JTH9 1297 aaKnown RBP9.52□□□□□ -0.89
SMARCD1-207ENST00000549526 MAMSTRQ6ZN01 415 aa9.52□□□□□ -0.89
SMARCD1-207ENST00000549526 SPATA31D4Q6ZUB0 917 aa9.52□□□□□ -0.89
SMARCD1-207ENST00000549526 PI4K2BQ8TCG2 481 aa9.52□□□□□ -0.89
SMARCD1-207ENST00000549526 TRAPPC12Q8WVT3 735 aa9.52□□□□□ -0.89
SMARCD1-207ENST00000549526 HNRNPLLQ8WVV9 542 aaKnown RBP9.52□□□□□ -0.89
SMARCD1-207ENST00000549526 TMEM40Q8WWA1 233 aa9.52□□□□□ -0.89
SMARCD1-207ENST00000549526 SEPT1Q8WYJ6 367 aa9.52□□□□□ -0.89
SMARCD1-207ENST00000549526 TNPO1Q92973 898 aaKnown RBP9.52□□□□□ -0.89
SMARCD1-207ENST00000549526 IGSF21Q96ID5 467 aa9.52□□□□□ -0.89
SMARCD1-207ENST00000549526 LRIG1Q96JA1 1093 aa9.52□□□□□ -0.89
SMARCD1-207ENST00000549526 RHOBTB2Q9BYZ6 727 aa9.52□□□□□ -0.89
SMARCD1-207ENST00000549526 LNPKQ9C0E8 428 aa9.52□□□□□ -0.89
SMARCD1-207ENST00000549526 SMOC1Q9H4F8 434 aa9.52□□□□□ -0.89
SMARCD1-207ENST00000549526 MSRB2Q9Y3D2 182 aa9.52□□□□□ -0.89
SMARCD1-207ENST00000549526 SHROOM3Q8TF72 1996 aa9.52□□□□□ -0.89
SMARCD1-207ENST00000549526 EVPLQ92817 2033 aa9.51□□□□□ -0.89
SMARCD1-207ENST00000549526 MTCL1Q9Y4B5 1905 aaKnown RBP9.51□□□□□ -0.89
SMARCD1-207ENST00000549526 C4orf47A7E2U8 309 aa9.51□□□□□ -0.89
SMARCD1-207ENST00000549526 OPLAHO14841 1288 aa9.51□□□□□ -0.89
SMARCD1-207ENST00000549526 STAM2O75886 525 aa9.51□□□□□ -0.89
SMARCD1-207ENST00000549526 IGHDP01880 384 aa9.51□□□□□ -0.89
SMARCD1-207ENST00000549526 PRB1P04280 392 aa9.51□□□□□ -0.89
SMARCD1-207ENST00000549526 CEACAM1P13688 526 aa9.51□□□□□ -0.89
SMARCD1-207ENST00000549526 ZSCAN20P17040 1043 aaPredicted RBP9.51□□□□□ -0.89
SMARCD1-207ENST00000549526 MRPS9P82933 396 aaKnown RBP9.51□□□□□ -0.89
SMARCD1-207ENST00000549526 SATB1Q01826 763 aa9.51□□□□□ -0.89
SMARCD1-207ENST00000549526 SEMA3FQ13275 785 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms