RNA–Protein interactions for RNA: ENST00000549308.5

PTPRR-209, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRR, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-209ENST00000549308 PRKCSHP14314 528 aaPredicted RBP13.28□□□□□ -0.28
PTPRR-209ENST00000549308 INSRRP14616 1297 aa13.28□□□□□ -0.28
PTPRR-209ENST00000549308 NR2F2P24468 414 aa13.28□□□□□ -0.28
PTPRR-209ENST00000549308 RPL13P26373 211 aaKnown RBP13.28□□□□□ -0.28
PTPRR-209ENST00000549308 NR1I3Q14994 352 aa13.28□□□□□ -0.28
PTPRR-209ENST00000549308 ARHGEF6Q15052 776 aa13.28□□□□□ -0.28
PTPRR-209ENST00000549308 IER5Q5VY09 327 aa13.28□□□□□ -0.28
PTPRR-209ENST00000549308 KIFC3Q9BVG8 833 aa13.28□□□□□ -0.28
PTPRR-209ENST00000549308 GBP3Q9H0R5 595 aa13.28□□□□□ -0.28
PTPRR-209ENST00000549308 DENND3A2RUS2 1198 aa13.27□□□□□ -0.29
PTPRR-209ENST00000549308 LRRC10BA6NIK2 292 aa13.27□□□□□ -0.29
PTPRR-209ENST00000549308 LRRIQ4A6NIV6 560 aa13.27□□□□□ -0.29
PTPRR-209ENST00000549308 ADCY3O60266 1144 aa13.27□□□□□ -0.29
PTPRR-209ENST00000549308 GNA14O95837 355 aa13.27□□□□□ -0.29
PTPRR-209ENST00000549308 GNRH1P01148 92 aa13.27□□□□□ -0.29
PTPRR-209ENST00000549308 NR3C1P04150 777 aa13.27□□□□□ -0.29
PTPRR-209ENST00000549308 MYL3P08590 195 aa13.27□□□□□ -0.29
PTPRR-209ENST00000549308 ELNP15502 786 aa13.27□□□□□ -0.29
PTPRR-209ENST00000549308 GLRA2P23416 452 aa13.27□□□□□ -0.29
PTPRR-209ENST00000549308 ABCD1P33897 745 aa13.27□□□□□ -0.29
PTPRR-209ENST00000549308 CHMP4BP1P59074 171 aa13.27□□□□□ -0.29
PTPRR-209ENST00000549308 CACNB2Q08289 660 aaPredicted RBP13.27□□□□□ -0.29
PTPRR-209ENST00000549308 TRIM32Q13049 653 aa13.27□□□□□ -0.29
PTPRR-209ENST00000549308 VSTM4Q8IW00 320 aa13.27□□□□□ -0.29
PTPRR-209ENST00000549308 ZC3H3Q8IXZ2 948 aaKnown RBP13.27□□□□□ -0.29
PTPRR-209ENST00000549308 LRRC71Q8N4P6 559 aa13.27□□□□□ -0.29
PTPRR-209ENST00000549308 TMEM161BQ8NDZ6 487 aa13.27□□□□□ -0.29
PTPRR-209ENST00000549308 DEPTORQ8TB45 409 aa13.27□□□□□ -0.29
PTPRR-209ENST00000549308 GOLGA5Q8TBA6 731 aa13.27□□□□□ -0.29
PTPRR-209ENST00000549308 RAET1EQ8TD07 263 aa13.27□□□□□ -0.29
PTPRR-209ENST00000549308 NTPCRQ9BSD7 190 aaKnown RBP13.27□□□□□ -0.29
PTPRR-209ENST00000549308 TUBGCP2Q9BSJ2 902 aa13.27□□□□□ -0.29
PTPRR-209ENST00000549308 IKZF4Q9H2S9 585 aa13.27□□□□□ -0.29
PTPRR-209ENST00000549308 RTN4Q9NQC3 1192 aaKnown RBP13.27□□□□□ -0.29
PTPRR-209ENST00000549308 INTS13Q9NVM9 706 aa13.27□□□□□ -0.29
PTPRR-209ENST00000549308 IGKV6-21A0A0C4DH24 114 aa13.26□□□□□ -0.29
PTPRR-209ENST00000549308 TEX33O43247 280 aa13.26□□□□□ -0.29
PTPRR-209ENST00000549308 DUSP11O75319 330 aaKnown RBP13.26□□□□□ -0.29
PTPRR-209ENST00000549308 NAMPTP43490 491 aa13.26□□□□□ -0.29
PTPRR-209ENST00000549308 DNM2P50570 870 aa13.26□□□□□ -0.29
PTPRR-209ENST00000549308 BEX3Q00994 111 aa13.26□□□□□ -0.29
PTPRR-209ENST00000549308 PPFIA1Q13136 1202 aa13.26□□□□□ -0.29
PTPRR-209ENST00000549308 EFCAB12Q6NXP0 572 aa13.26□□□□□ -0.29
PTPRR-209ENST00000549308 RETREG2Q8NC44 543 aa13.26□□□□□ -0.29
PTPRR-209ENST00000549308 PSPC1Q8WXF1 523 aaKnown RBP13.26□□□□□ -0.29
PTPRR-209ENST00000549308 NOC4LQ9BVI4 516 aaKnown RBP13.26□□□□□ -0.29
PTPRR-209ENST00000549308 AGPAT3Q9NRZ7 376 aa13.26□□□□□ -0.29
PTPRR-209ENST00000549308 TBX20Q9UMR3 447 aa13.26□□□□□ -0.29
PTPRR-209ENST00000549308 MAGEB2O15479 319 aa13.25□□□□□ -0.29
PTPRR-209ENST00000549308 C22orf31O95567 290 aa13.25□□□□□ -0.29
PTPRR-209ENST00000549308 HMGCRP04035 888 aa13.25□□□□□ -0.29
PTPRR-209ENST00000549308 PRKAR2AP13861 404 aaKnown RBP13.25□□□□□ -0.29
PTPRR-209ENST00000549308 KLRC1P26715 233 aa13.25□□□□□ -0.29
PTPRR-209ENST00000549308 PSEN2P49810 448 aa13.25□□□□□ -0.29
PTPRR-209ENST00000549308 CYP2J2P51589 502 aa13.25□□□□□ -0.29
PTPRR-209ENST00000549308 IRX5P78411 483 aaPredicted RBP13.25□□□□□ -0.29
PTPRR-209ENST00000549308 DRP2Q13474 957 aa13.25□□□□□ -0.29
PTPRR-209ENST00000549308 CAPSQ13938 189 aa13.25□□□□□ -0.29
PTPRR-209ENST00000549308 MFSD10Q14728 455 aa13.25□□□□□ -0.29
PTPRR-209ENST00000549308 GRIK4Q16099 956 aa13.25□□□□□ -0.29
PTPRR-209ENST00000549308 NFIL3Q16649 462 aa13.25□□□□□ -0.29
PTPRR-209ENST00000549308 FSCN1Q16658 493 aaKnown RBP13.25□□□□□ -0.29
PTPRR-209ENST00000549308 PTPN21Q16825 1174 aa13.25□□□□□ -0.29
PTPRR-209ENST00000549308 CEP135Q66GS9 1140 aa13.25□□□□□ -0.29
PTPRR-209ENST00000549308 CCDC186Q7Z3E2 898 aa13.25□□□□□ -0.29
PTPRR-209ENST00000549308 MAP4K3Q8IVH8 894 aa13.25□□□□□ -0.29
PTPRR-209ENST00000549308 METTL13Q8N6R0 699 aa13.25□□□□□ -0.29
PTPRR-209ENST00000549308 ZNF296Q8WUU4 475 aaPredicted RBP13.25□□□□□ -0.29
PTPRR-209ENST00000549308 PRPF31Q8WWY3 499 aaKnown RBP13.25□□□□□ -0.29
PTPRR-209ENST00000549308 SPC25Q9HBM1 224 aa13.25□□□□□ -0.29
PTPRR-209ENST00000549308 CGNQ9P2M7 1197 aaKnown RBP13.25□□□□□ -0.29
PTPRR-209ENST00000549308 SUCLA2Q9P2R7 463 aaPredicted RBP13.25□□□□□ -0.29
PTPRR-209ENST00000549308 IMPACTQ9P2X3 320 aa13.25□□□□□ -0.29
PTPRR-209ENST00000549308 ADGRA3Q8IWK6 1321 aa13.25□□□□□ -0.29
PTPRR-209ENST00000549308 LGALS16A8MUM7 142 aa13.24□□□□□ -0.29
PTPRR-209ENST00000549308 SLC16A3O15427 465 aaKnown RBP13.24□□□□□ -0.29
PTPRR-209ENST00000549308 SEPT4O43236 478 aa13.24□□□□□ -0.29
PTPRR-209ENST00000549308 C6orf222P0C671 652 aaPredicted RBP13.24□□□□□ -0.29
PTPRR-209ENST00000549308 RARBP10826 455 aa13.24□□□□□ -0.29
PTPRR-209ENST00000549308 EPB41P11171 864 aaKnown RBP13.24□□□□□ -0.29
PTPRR-209ENST00000549308 SCP2P22307 547 aa13.24□□□□□ -0.29
PTPRR-209ENST00000549308 CLCN3P51790 818 aa13.24□□□□□ -0.29
PTPRR-209ENST00000549308 UBXN1Q04323 297 aa13.24□□□□□ -0.29
PTPRR-209ENST00000549308 STRN3Q13033 797 aa13.24□□□□□ -0.29
PTPRR-209ENST00000549308 MKRN4PQ13434 485 aaPredicted RBP13.24□□□□□ -0.29
PTPRR-209ENST00000549308 MXD4Q14582 209 aaPredicted RBP13.24□□□□□ -0.29
PTPRR-209ENST00000549308 MAN2A1Q16706 1144 aa13.24□□□□□ -0.29
PTPRR-209ENST00000549308 ZBTB10Q96DT7 871 aa13.24□□□□□ -0.29
PTPRR-209ENST00000549308 BICD1Q96G01 975 aa13.24□□□□□ -0.29
PTPRR-209ENST00000549308 BEGAINQ9BUH8 593 aa13.24□□□□□ -0.29
PTPRR-209ENST00000549308 ARHGAP28Q9P2N2 729 aa13.24□□□□□ -0.29
PTPRR-209ENST00000549308 RRN3P2A6NIE6 340 aa13.24□□□□□ -0.29
PTPRR-209ENST00000549308 F2P00734 622 aa13.24□□□□□ -0.29
PTPRR-209ENST00000549308 CCND3P30281 292 aaPredicted RBP13.24□□□□□ -0.29
PTPRR-209ENST00000549308 GJA9P57773 515 aa13.24□□□□□ -0.29
PTPRR-209ENST00000549308 SNRPFP62306 86 aaKnown RBP13.24□□□□□ -0.29
PTPRR-209ENST00000549308 MAP2K1Q02750 393 aaPredicted RBP13.24□□□□□ -0.29
PTPRR-209ENST00000549308 LAMTOR4Q0VGL1 99 aa13.24□□□□□ -0.29
PTPRR-209ENST00000549308 TFDP1Q14186 410 aa13.24□□□□□ -0.29
PTPRR-209ENST00000549308 KIAA0753Q2KHM9 967 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms