RNA–Protein interactions for RNA: ENST00000548524.5

USP15-208, Transcript of ubiquitin specific peptidase 15, humanhuman

TSL 2

Gene USP15, Length 648 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP15-208ENST00000548524 PPME1Q9Y570 386 aa10.63□□□□□ -0.71
USP15-208ENST00000548524 PCDHB7Q9Y5E2 793 aa10.63□□□□□ -0.71
USP15-208ENST00000548524 TET1Q8NFU7 2136 aa10.63□□□□□ -0.71
USP15-208ENST00000548524 IGKV6-21A0A0C4DH24 114 aa10.62□□□□□ -0.71
USP15-208ENST00000548524 H3BQV1 296 aa10.62□□□□□ -0.71
USP15-208ENST00000548524 DGKIO75912 1065 aa10.62□□□□□ -0.71
USP15-208ENST00000548524 SLITRK3O94933 977 aa10.62□□□□□ -0.71
USP15-208ENST00000548524 CD2BP2O95400 341 aaKnown RBP10.62□□□□□ -0.71
USP15-208ENST00000548524 OR52Z1P0C646 297 aa10.62□□□□□ -0.71
USP15-208ENST00000548524 DARSP14868 501 aaKnown RBP10.62□□□□□ -0.71
USP15-208ENST00000548524 GJB2P29033 226 aa10.62□□□□□ -0.71
USP15-208ENST00000548524 CTNNB1P35222 781 aa10.62□□□□□ -0.71
USP15-208ENST00000548524 RFC5P40937 340 aa10.62□□□□□ -0.71
USP15-208ENST00000548524 TRAPPC10P48553 1259 aa10.62□□□□□ -0.71
USP15-208ENST00000548524 ORC2Q13416 577 aaPredicted RBP10.62□□□□□ -0.71
USP15-208ENST00000548524 GPM6BQ13491 265 aa10.62□□□□□ -0.71
USP15-208ENST00000548524 PAN2Q504Q3 1202 aaKnown RBP10.62□□□□□ -0.71
USP15-208ENST00000548524 EPC2Q52LR7 807 aa10.62□□□□□ -0.71
USP15-208ENST00000548524 MCTP1Q6DN14 999 aa10.62□□□□□ -0.71
USP15-208ENST00000548524 SLC24A5Q71RS6 500 aa10.62□□□□□ -0.71
USP15-208ENST00000548524 RHPN2Q8IUC4 686 aa10.62□□□□□ -0.71
USP15-208ENST00000548524 TMEM192Q8IY95 271 aa10.62□□□□□ -0.71
USP15-208ENST00000548524 NLRP4Q96MN2 994 aa10.62□□□□□ -0.71
USP15-208ENST00000548524 CEP89Q96ST8 783 aa10.62□□□□□ -0.71
USP15-208ENST00000548524 PRDM6Q9NQX0 595 aa10.62□□□□□ -0.71
USP15-208ENST00000548524 SMC3Q9UQE7 1217 aa10.62□□□□□ -0.71
USP15-208ENST00000548524 RWDD3Q9Y3V2 267 aa10.62□□□□□ -0.71
USP15-208ENST00000548524 A0A087WZ62 844 aa10.61□□□□□ -0.71
USP15-208ENST00000548524 POTEMA6NI47 508 aa10.61□□□□□ -0.71
USP15-208ENST00000548524 GAS2O43903 313 aaKnown RBP10.61□□□□□ -0.71
USP15-208ENST00000548524 LPXNO60711 386 aa10.61□□□□□ -0.71
USP15-208ENST00000548524 POU3F3P20264 500 aaPredicted RBP10.61□□□□□ -0.71
USP15-208ENST00000548524 FGFR4P22455 802 aa10.61□□□□□ -0.71
USP15-208ENST00000548524 TECP42680 631 aa10.61□□□□□ -0.71
USP15-208ENST00000548524 PTPROQ16827 1216 aa10.61□□□□□ -0.71
USP15-208ENST00000548524 ZNF410Q86VK4 478 aa10.61□□□□□ -0.71
USP15-208ENST00000548524 CMTR2Q8IYT2 770 aaKnown RBP10.61□□□□□ -0.71
USP15-208ENST00000548524 ERMNQ8TAM6 284 aa10.61□□□□□ -0.71
USP15-208ENST00000548524 TCP11Q8WWU5 503 aa10.61□□□□□ -0.71
USP15-208ENST00000548524 PSPC1Q8WXF1 523 aaKnown RBP10.61□□□□□ -0.71
USP15-208ENST00000548524 TMEM143Q96AN5 459 aa10.61□□□□□ -0.71
USP15-208ENST00000548524 ZNF689Q96CS4 500 aaPredicted RBP10.61□□□□□ -0.71
USP15-208ENST00000548524 KCNK17Q96T54 332 aa10.61□□□□□ -0.71
USP15-208ENST00000548524 FDXACB1Q9BRP7 624 aaPredicted RBP10.61□□□□□ -0.71
USP15-208ENST00000548524 INO80BQ9C086 356 aaPredicted RBP10.61□□□□□ -0.71
USP15-208ENST00000548524 ATP6V0A4Q9HBG4 840 aa10.61□□□□□ -0.71
USP15-208ENST00000548524 LMCD1Q9NZU5 365 aa10.61□□□□□ -0.71
USP15-208ENST00000548524 THEGQ9P2T0 379 aa10.61□□□□□ -0.71
USP15-208ENST00000548524 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.61□□□□□ -0.71
USP15-208ENST00000548524 COL4A3BPQ9Y5P4 624 aa10.61□□□□□ -0.71
USP15-208ENST00000548524 COL6A3P12111 3177 aa10.61□□□□□ -0.71
USP15-208ENST00000548524 TBKBP1A7MCY6 615 aa10.6□□□□□ -0.71
USP15-208ENST00000548524 C9IYK1 514 aa10.6□□□□□ -0.71
USP15-208ENST00000548524 H3BNC9 293 aa10.6□□□□□ -0.71
USP15-208ENST00000548524 ZBTB39O15060 712 aa10.6□□□□□ -0.71
USP15-208ENST00000548524 CSDE1O75534 798 aaKnown RBP10.6□□□□□ -0.71
USP15-208ENST00000548524 LYPLA2O95372 231 aa10.6□□□□□ -0.71
USP15-208ENST00000548524 RB1P06400 928 aa10.6□□□□□ -0.71
USP15-208ENST00000548524 SFPQP23246 707 aaKnown RBP eCLIP10.6□□□□□ -0.71
USP15-208ENST00000548524 U2AF2P26368 475 aaKnown RBP eCLIP10.6□□□□□ -0.715e-6■□□□□ 11.1
USP15-208ENST00000548524 BMPR1AP36894 532 aa10.6□□□□□ -0.71
USP15-208ENST00000548524 GATMP50440 423 aa10.6□□□□□ -0.71
USP15-208ENST00000548524 DSC3Q14574 896 aa10.6□□□□□ -0.71
USP15-208ENST00000548524 EMC2Q15006 297 aa10.6□□□□□ -0.71
USP15-208ENST00000548524 TPRNQ4KMQ1 711 aa10.6□□□□□ -0.71
USP15-208ENST00000548524 SPOUT1Q5T280 376 aaKnown RBP10.6□□□□□ -0.71
USP15-208ENST00000548524 KSR1Q8IVT5 923 aa10.6□□□□□ -0.71
USP15-208ENST00000548524 ZNF687Q8N1G0 1237 aa10.6□□□□□ -0.71
USP15-208ENST00000548524 RNF169Q8NCN4 708 aa10.6□□□□□ -0.71
USP15-208ENST00000548524 MTRQ99707 1265 aa10.6□□□□□ -0.71
USP15-208ENST00000548524 HSD17B14Q9BPX1 270 aa10.6□□□□□ -0.71
USP15-208ENST00000548524 C11orf84Q9BUA3 381 aaPredicted RBP10.6□□□□□ -0.71
USP15-208ENST00000548524 BACH2Q9BYV9 841 aa10.6□□□□□ -0.71
USP15-208ENST00000548524 DHX33Q9H6R0 707 aaKnown RBP10.6□□□□□ -0.71
USP15-208ENST00000548524 RC3H2Q9HBD1 1191 aaKnown RBP10.6□□□□□ -0.71
USP15-208ENST00000548524 TUFT1Q9NNX1 390 aa10.6□□□□□ -0.71
USP15-208ENST00000548524 ANKEF1Q9NU02 776 aa10.6□□□□□ -0.71
USP15-208ENST00000548524 MRPL42Q9Y6G3 142 aaKnown RBP10.6□□□□□ -0.71
USP15-208ENST00000548524 DLL1O00548 723 aa10.59□□□□□ -0.71
USP15-208ENST00000548524 HOXA2O43364 376 aa10.59□□□□□ -0.71
USP15-208ENST00000548524 SRGAP2CP0DJJ0 459 aa10.59□□□□□ -0.71
USP15-208ENST00000548524 FAM189BP81408 668 aa10.59□□□□□ -0.71
USP15-208ENST00000548524 LAMTOR4Q0VGL1 99 aa10.59□□□□□ -0.71
USP15-208ENST00000548524 FAM102BQ5T8I3 360 aa10.59□□□□□ -0.71
USP15-208ENST00000548524 CATSPER4Q7RTX7 472 aa10.59□□□□□ -0.71
USP15-208ENST00000548524 ABI1Q8IZP0 508 aa10.59□□□□□ -0.71
USP15-208ENST00000548524 PIGOQ8TEQ8 1089 aa10.59□□□□□ -0.71
USP15-208ENST00000548524 ATXN2LQ8WWM7 1075 aaKnown RBP10.59□□□□□ -0.71
USP15-208ENST00000548524 PRPF31Q8WWY3 499 aaKnown RBP10.59□□□□□ -0.71
USP15-208ENST00000548524 CLP1Q92989 425 aaKnown RBP10.59□□□□□ -0.71
USP15-208ENST00000548524 MRPL38Q96DV4 380 aaKnown RBP10.59□□□□□ -0.71
USP15-208ENST00000548524 ELAC1Q9H777 363 aaKnown RBP10.59□□□□□ -0.71
USP15-208ENST00000548524 TMEM161AQ9NX61 479 aa10.59□□□□□ -0.71
USP15-208ENST00000548524 DACT1Q9NYF0 836 aa10.59□□□□□ -0.71
USP15-208ENST00000548524 GTF3C3Q9Y5Q9 886 aa10.59□□□□□ -0.71
USP15-208ENST00000548524 CHD9Q3L8U1 2897 aa10.59□□□□□ -0.71
USP15-208ENST00000548524 A0A087WWV3 80 aa10.58□□□□□ -0.72
USP15-208ENST00000548524 C5orf67F2Z3F1 127 aa10.58□□□□□ -0.72
USP15-208ENST00000548524 ASAP2O43150 1006 aa10.58□□□□□ -0.72
USP15-208ENST00000548524 MED24O75448 989 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms