RNA–Protein interactions for RNA: ENST00000548277.1

TRAFD1-205, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-205ENST00000548277 HOXB8P17481 243 aaPredicted RBP13.48□□□□□ -0.25
TRAFD1-205ENST00000548277 PPM1AP35813 382 aa13.48□□□□□ -0.25
TRAFD1-205ENST00000548277 KRT32Q14532 448 aa13.48□□□□□ -0.25
TRAFD1-205ENST00000548277 TSGA10IPQ3SY00 556 aa13.48□□□□□ -0.25
TRAFD1-205ENST00000548277 BMP2KLQ5H9B9 411 aa13.48□□□□□ -0.25
TRAFD1-205ENST00000548277 TEX2Q8IWB9 1127 aa13.48□□□□□ -0.25
TRAFD1-205ENST00000548277 VPS52Q8N1B4 723 aa13.48□□□□□ -0.25
TRAFD1-205ENST00000548277 LINC01465Q8N7H1 131 aa13.48□□□□□ -0.25
TRAFD1-205ENST00000548277 LENG9Q96B70 501 aa13.48□□□□□ -0.25
TRAFD1-205ENST00000548277 JAKMIP1Q96N16 626 aaKnown RBP13.48□□□□□ -0.25
TRAFD1-205ENST00000548277 FDXACB1Q9BRP7 624 aaPredicted RBP13.48□□□□□ -0.25
TRAFD1-205ENST00000548277 TEKT3Q9BXF9 490 aa13.48□□□□□ -0.25
TRAFD1-205ENST00000548277 ADAM7Q9H2U9 754 aa13.48□□□□□ -0.25
TRAFD1-205ENST00000548277 LIMD1Q9UGP4 676 aa13.48□□□□□ -0.25
TRAFD1-205ENST00000548277 SEPT9Q9UHD8 586 aaPredicted RBP13.48□□□□□ -0.25
TRAFD1-205ENST00000548277 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.47□□□□□ -0.25
TRAFD1-205ENST00000548277 ESYT2A0FGR8 921 aa13.47□□□□□ -0.25
TRAFD1-205ENST00000548277 SPDYE4A6NLX3 237 aa13.47□□□□□ -0.25
TRAFD1-205ENST00000548277 DDX11L8A8MPP1 907 aa13.47□□□□□ -0.25
TRAFD1-205ENST00000548277 BRD1O95696 1058 aa13.47□□□□□ -0.25
TRAFD1-205ENST00000548277 EOMESO95936 686 aa13.47□□□□□ -0.25
TRAFD1-205ENST00000548277 EPCAMP16422 314 aa13.47□□□□□ -0.25
TRAFD1-205ENST00000548277 CIITAP33076 1130 aa13.47□□□□□ -0.25
TRAFD1-205ENST00000548277 NLRP5P59047 1200 aa13.47□□□□□ -0.25
TRAFD1-205ENST00000548277 LRCH2Q5VUJ6 765 aa13.47□□□□□ -0.25
TRAFD1-205ENST00000548277 MIER3Q7Z3K6 550 aa13.47□□□□□ -0.25
TRAFD1-205ENST00000548277 ZNF598Q86UK7 904 aaKnown RBP13.47□□□□□ -0.25
TRAFD1-205ENST00000548277 TMEM173Q86WV6 379 aaPredicted RBP13.47□□□□□ -0.25
TRAFD1-205ENST00000548277 KSR1Q8IVT5 923 aa13.47□□□□□ -0.25
TRAFD1-205ENST00000548277 TMEM169Q96HH4 297 aa13.47□□□□□ -0.25
TRAFD1-205ENST00000548277 GCOM2Q9BZD3 368 aaPredicted RBP13.47□□□□□ -0.25
TRAFD1-205ENST00000548277 NCOA5Q9HCD5 579 aaKnown RBP13.47□□□□□ -0.25
TRAFD1-205ENST00000548277 DACT1Q9NYF0 836 aa13.47□□□□□ -0.25
TRAFD1-205ENST00000548277 DBR1Q9UK59 544 aaKnown RBP13.47□□□□□ -0.25
TRAFD1-205ENST00000548277 TDRD15B5MCY1 1934 aaKnown RBP13.47□□□□□ -0.25
TRAFD1-205ENST00000548277 MEIS3P2A8K0S8 358 aa13.46□□□□□ -0.25
TRAFD1-205ENST00000548277 ST18O60284 1047 aa13.46□□□□□ -0.25
TRAFD1-205ENST00000548277 SSBP05455 408 aaKnown RBP eCLIP13.46□□□□□ -0.25
TRAFD1-205ENST00000548277 HMGB1P09429 215 aaKnown RBP13.46□□□□□ -0.25
TRAFD1-205ENST00000548277 MYBP10242 640 aa13.46□□□□□ -0.25
TRAFD1-205ENST00000548277 RNASELQ05823 741 aaKnown RBP13.46□□□□□ -0.25
TRAFD1-205ENST00000548277 BMS1Q14692 1282 aaKnown RBP13.46□□□□□ -0.25
TRAFD1-205ENST00000548277 MCTP2Q6DN12 878 aa13.46□□□□□ -0.25
TRAFD1-205ENST00000548277 TWF2Q6IBS0 349 aaKnown RBP13.46□□□□□ -0.25
TRAFD1-205ENST00000548277 BLOC1S2Q6QNY1 142 aa13.46□□□□□ -0.25
TRAFD1-205ENST00000548277 FAM43BQ6ZT52 329 aaPredicted RBP13.46□□□□□ -0.25
TRAFD1-205ENST00000548277 RHPN2Q8IUC4 686 aa13.46□□□□□ -0.25
TRAFD1-205ENST00000548277 BICD2Q8TD16 824 aa13.46□□□□□ -0.25
TRAFD1-205ENST00000548277 TBCKQ8TEA7 893 aa13.46□□□□□ -0.25
TRAFD1-205ENST00000548277 LARP6Q9BRS8 491 aaKnown RBP13.46□□□□□ -0.25
TRAFD1-205ENST00000548277 NRDE2Q9H7Z3 1164 aa13.46□□□□□ -0.25
TRAFD1-205ENST00000548277 SORCS3Q9UPU3 1222 aa13.46□□□□□ -0.25
TRAFD1-205ENST00000548277 PHKA2P46019 1235 aa13.45□□□□□ -0.26
TRAFD1-205ENST00000548277 JAK3P52333 1124 aa13.45□□□□□ -0.26
TRAFD1-205ENST00000548277 ITIH3Q06033 890 aa13.45□□□□□ -0.26
TRAFD1-205ENST00000548277 MTMR3Q13615 1198 aa13.45□□□□□ -0.26
TRAFD1-205ENST00000548277 ATAT1Q5SQI0 421 aa13.45□□□□□ -0.26
TRAFD1-205ENST00000548277 TMC5Q6UXY8 1006 aa13.45□□□□□ -0.26
TRAFD1-205ENST00000548277 TMEM105Q8N8V8 129 aa13.45□□□□□ -0.26
TRAFD1-205ENST00000548277 CCDC148Q8NFR7 591 aa13.45□□□□□ -0.26
TRAFD1-205ENST00000548277 SLC5A5Q92911 643 aa13.45□□□□□ -0.26
TRAFD1-205ENST00000548277 NLRP4Q96MN2 994 aa13.45□□□□□ -0.26
TRAFD1-205ENST00000548277 SUCLA2Q9P2R7 463 aaPredicted RBP13.45□□□□□ -0.26
TRAFD1-205ENST00000548277 DNAJB4Q9UDY4 337 aa13.45□□□□□ -0.26
TRAFD1-205ENST00000548277 PIN4Q9Y237 131 aaKnown RBP13.45□□□□□ -0.26
TRAFD1-205ENST00000548277 SNX14Q9Y5W7 946 aa13.45□□□□□ -0.26
TRAFD1-205ENST00000548277 DOCK6Q96HP0 2047 aa13.45□□□□□ -0.26
TRAFD1-205ENST00000548277 MTCL1Q9Y4B5 1905 aaKnown RBP13.45□□□□□ -0.26
TRAFD1-205ENST00000548277 CDC45O75419 566 aa13.44□□□□□ -0.26
TRAFD1-205ENST00000548277 TDP2O95551 362 aa13.44□□□□□ -0.26
TRAFD1-205ENST00000548277 GALTP07902 379 aa13.44□□□□□ -0.26
TRAFD1-205ENST00000548277 SFNP31947 248 aa13.44□□□□□ -0.26
TRAFD1-205ENST00000548277 MTHFRP42898 656 aa13.44□□□□□ -0.26
TRAFD1-205ENST00000548277 DNM2P50570 870 aa13.44□□□□□ -0.26
TRAFD1-205ENST00000548277 USP11P51784 963 aa13.44□□□□□ -0.26
TRAFD1-205ENST00000548277 RCAN1P53805 252 aa13.44□□□□□ -0.26
TRAFD1-205ENST00000548277 TARBP2Q15633 366 aaKnown RBP13.44□□□□□ -0.26
TRAFD1-205ENST00000548277 NTRK3Q16288 839 aa13.44□□□□□ -0.26
TRAFD1-205ENST00000548277 PLA2G4FQ68DD2 849 aa13.44□□□□□ -0.26
TRAFD1-205ENST00000548277 CATSPER4Q7RTX7 472 aa13.44□□□□□ -0.26
TRAFD1-205ENST00000548277 ZNF280BQ86YH2 543 aa13.44□□□□□ -0.26
TRAFD1-205ENST00000548277 TDRD5Q8NAT2 981 aaKnown RBP13.44□□□□□ -0.26
TRAFD1-205ENST00000548277 FLCNQ8NFG4 579 aa13.44□□□□□ -0.26
TRAFD1-205ENST00000548277 BCL7CQ8WUZ0 217 aaPredicted RBP13.44□□□□□ -0.26
TRAFD1-205ENST00000548277 IGSF21Q96ID5 467 aa13.44□□□□□ -0.26
TRAFD1-205ENST00000548277 NECTIN4Q96NY8 510 aa13.44□□□□□ -0.26
TRAFD1-205ENST00000548277 RIT2Q99578 217 aa13.44□□□□□ -0.26
TRAFD1-205ENST00000548277 MRPL9Q9BYD2 267 aaKnown RBP13.44□□□□□ -0.26
TRAFD1-205ENST00000548277 ZBP1Q9H171 429 aa13.44□□□□□ -0.26
TRAFD1-205ENST00000548277 MFSD1Q9H3U5 465 aa13.44□□□□□ -0.26
TRAFD1-205ENST00000548277 BMP2KQ9NSY1 1161 aaPredicted RBP13.44□□□□□ -0.26
TRAFD1-205ENST00000548277 TBC1D13Q9NVG8 400 aa13.44□□□□□ -0.26
TRAFD1-205ENST00000548277 GALR2O43603 387 aaPredicted RBP13.43□□□□□ -0.26
TRAFD1-205ENST00000548277 OFD1O75665 1012 aa13.43□□□□□ -0.26
TRAFD1-205ENST00000548277 PSMD10O75832 226 aa13.43□□□□□ -0.26
TRAFD1-205ENST00000548277 STBD1O95210 358 aa13.43□□□□□ -0.26
TRAFD1-205ENST00000548277 SFPQP23246 707 aaKnown RBP eCLIP13.43□□□□□ -0.26
TRAFD1-205ENST00000548277 KLRC2P26717 231 aa13.43□□□□□ -0.26
TRAFD1-205ENST00000548277 SLC11A1P49279 550 aa13.43□□□□□ -0.26
TRAFD1-205ENST00000548277 XKR3Q5GH77 459 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms