RNA–Protein interactions for RNA: ENST00000547486.1

CPSF6-204, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2

Gene CPSF6, Length 872 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-204ENST00000547486 RHPN2Q8IUC4 686 aa14.97□□□□□ -0.01
CPSF6-204ENST00000547486 ADHFE1Q8IWW8 467 aa14.97□□□□□ -0.01
CPSF6-204ENST00000547486 THNSL1Q8IYQ7 743 aa14.97□□□□□ -0.01
CPSF6-204ENST00000547486 NSUN7Q8NE18 718 aaKnown RBP14.97□□□□□ -0.01
CPSF6-204ENST00000547486 WASF1Q92558 559 aa14.97□□□□□ -0.01
CPSF6-204ENST00000547486 GTF3C6Q969F1 213 aa14.97□□□□□ -0.01
CPSF6-204ENST00000547486 RGL1Q9NZL6 768 aa14.97□□□□□ -0.01
CPSF6-204ENST00000547486 CD207Q9UJ71 328 aa14.97□□□□□ -0.01
CPSF6-204ENST00000547486 C5orf42Q9H799 3197 aa14.97□□□□□ -0.01
CPSF6-204ENST00000547486 FSCN2O14926 492 aa14.96□□□□□ -0.01
CPSF6-204ENST00000547486 HOXA2O43364 376 aa14.96□□□□□ -0.01
CPSF6-204ENST00000547486 JAK2O60674 1132 aa14.96□□□□□ -0.01
CPSF6-204ENST00000547486 GPR37L1O60883 481 aa14.96□□□□□ -0.01
CPSF6-204ENST00000547486 EOMESO95936 686 aa14.96□□□□□ -0.01
CPSF6-204ENST00000547486 P4HBP07237 508 aaKnown RBP14.96□□□□□ -0.01
CPSF6-204ENST00000547486 LAG3P18627 525 aa14.96□□□□□ -0.01
CPSF6-204ENST00000547486 NDUFV1P49821 464 aa14.96□□□□□ -0.01
CPSF6-204ENST00000547486 CDC42EP1Q00587 391 aa14.96□□□□□ -0.01
CPSF6-204ENST00000547486 PLCB3Q01970 1234 aa14.96□□□□□ -0.01
CPSF6-204ENST00000547486 ST3GAL1Q11201 340 aa14.96□□□□□ -0.01
CPSF6-204ENST00000547486 EPHA7Q15375 998 aa14.96□□□□□ -0.01
CPSF6-204ENST00000547486 TMEM31Q5JXX7 168 aa14.96□□□□□ -0.01
CPSF6-204ENST00000547486 KCNT2Q6UVM3 1135 aa14.96□□□□□ -0.01
CPSF6-204ENST00000547486 VN1R2Q8NFZ6 395 aa14.96□□□□□ -0.01
CPSF6-204ENST00000547486 TLE6Q9H808 572 aa14.96□□□□□ -0.01
CPSF6-204ENST00000547486 IFT122Q9HBG6 1241 aa14.96□□□□□ -0.01
CPSF6-204ENST00000547486 TLR9Q9NR96 1032 aa14.96□□□□□ -0.01
CPSF6-204ENST00000547486 CHST12Q9NRB3 414 aa14.96□□□□□ -0.01
CPSF6-204ENST00000547486 PRKAG3Q9UGI9 489 aa14.96□□□□□ -0.01
CPSF6-204ENST00000547486 BARX2Q9UMQ3 279 aaPredicted RBP14.96□□□□□ -0.01
CPSF6-204ENST00000547486 FAM50BQ9Y247 325 aa14.96□□□□□ -0.01
CPSF6-204ENST00000547486 KIAA1671Q9BY89 1806 aa14.95□□□□□ -0.02
CPSF6-204ENST00000547486 BTBD18B2RXH4 712 aa14.95□□□□□ -0.02
CPSF6-204ENST00000547486 WNT7AO00755 349 aa14.95□□□□□ -0.02
CPSF6-204ENST00000547486 MARCH6O60337 910 aa14.95□□□□□ -0.02
CPSF6-204ENST00000547486 EYA4O95677 639 aa14.95□□□□□ -0.02
CPSF6-204ENST00000547486 KRT2P35908 639 aa14.95□□□□□ -0.02
CPSF6-204ENST00000547486 SMAD4Q13485 552 aaKnown RBP14.95□□□□□ -0.02
CPSF6-204ENST00000547486 CTTNQ14247 550 aaKnown RBP14.95□□□□□ -0.02
CPSF6-204ENST00000547486 LONRF3Q496Y0 759 aa14.95□□□□□ -0.02
CPSF6-204ENST00000547486 NCAPH2Q6IBW4 605 aa14.95□□□□□ -0.02
CPSF6-204ENST00000547486 ZNF410Q86VK4 478 aa14.95□□□□□ -0.02
CPSF6-204ENST00000547486 C4orf19Q8IY42 314 aa14.95□□□□□ -0.02
CPSF6-204ENST00000547486 ABI1Q8IZP0 508 aa14.95□□□□□ -0.02
CPSF6-204ENST00000547486 HELQQ8TDG4 1101 aa14.95□□□□□ -0.02
CPSF6-204ENST00000547486 PRPF31Q8WWY3 499 aaKnown RBP14.95□□□□□ -0.02
CPSF6-204ENST00000547486 MRPS27Q92552 414 aaKnown RBP14.95□□□□□ -0.02
CPSF6-204ENST00000547486 PPP2R3CQ969Q6 453 aa14.95□□□□□ -0.02
CPSF6-204ENST00000547486 TMEM143Q96AN5 459 aa14.95□□□□□ -0.02
CPSF6-204ENST00000547486 DYDC2Q96IM9 177 aa14.95□□□□□ -0.02
CPSF6-204ENST00000547486 CEP170P1Q96L14 293 aa14.95□□□□□ -0.02
CPSF6-204ENST00000547486 NLRP4Q96MN2 994 aa14.95□□□□□ -0.02
CPSF6-204ENST00000547486 NAP1L4Q99733 375 aaKnown RBP14.95□□□□□ -0.02
CPSF6-204ENST00000547486 TRAIPQ9BWF2 469 aa14.95□□□□□ -0.02
CPSF6-204ENST00000547486 DHX33Q9H6R0 707 aaKnown RBP14.95□□□□□ -0.02
CPSF6-204ENST00000547486 DACT1Q9NYF0 836 aa14.95□□□□□ -0.02
CPSF6-204ENST00000547486 FNDC1Q4ZHG4 1894 aaPredicted RBP14.95□□□□□ -0.02
CPSF6-204ENST00000547486 WDR81Q562E7 1941 aa14.94□□□□□ -0.02
CPSF6-204ENST00000547486 MEIS3P2A8K0S8 358 aa14.94□□□□□ -0.02
CPSF6-204ENST00000547486 SLITRK3O94933 977 aa14.94□□□□□ -0.02
CPSF6-204ENST00000547486 YWHABP31946 246 aaKnown RBP14.94□□□□□ -0.02
CPSF6-204ENST00000547486 PHKA2P46019 1235 aa14.94□□□□□ -0.02
CPSF6-204ENST00000547486 FOSBP53539 338 aa14.94□□□□□ -0.02
CPSF6-204ENST00000547486 CYP4A11Q02928 519 aa14.94□□□□□ -0.02
CPSF6-204ENST00000547486 COASYQ13057 564 aa14.94□□□□□ -0.02
CPSF6-204ENST00000547486 KCNC3Q14003 757 aa14.94□□□□□ -0.02
CPSF6-204ENST00000547486 DUSP6Q16828 381 aa14.94□□□□□ -0.02
CPSF6-204ENST00000547486 CSPP1Q1MSJ5 1256 aa14.94□□□□□ -0.02
CPSF6-204ENST00000547486 LRRC43Q8N309 656 aa14.94□□□□□ -0.02
CPSF6-204ENST00000547486 LPPQ93052 612 aa14.94□□□□□ -0.02
CPSF6-204ENST00000547486 ZNF558Q96NG5 402 aa14.94□□□□□ -0.02
CPSF6-204ENST00000547486 LXNQ9BS40 222 aa14.94□□□□□ -0.02
CPSF6-204ENST00000547486 MINDY3Q9H8M7 445 aa14.94□□□□□ -0.02
CPSF6-204ENST00000547486 BMP2KQ9NSY1 1161 aaPredicted RBP14.94□□□□□ -0.02
CPSF6-204ENST00000547486 LZTS1Q9Y250 596 aa14.94□□□□□ -0.02
CPSF6-204ENST00000547486 HIDE1A8MVS5 230 aa14.93□□□□□ -0.02
CPSF6-204ENST00000547486 NT5C1B-RDH14C9J2C7 533 aa14.93□□□□□ -0.02
CPSF6-204ENST00000547486 DKC1O60832 514 aaKnown RBP eCLIP14.93□□□□□ -0.02
CPSF6-204ENST00000547486 SRGAP2CP0DJJ0 459 aa14.93□□□□□ -0.02
CPSF6-204ENST00000547486 SFPQP23246 707 aaKnown RBP eCLIP14.93□□□□□ -0.02
CPSF6-204ENST00000547486 PLPP4Q5VZY2 271 aa14.93□□□□□ -0.02
CPSF6-204ENST00000547486 PDE12Q6L8Q7 609 aaKnown RBP14.93□□□□□ -0.02
CPSF6-204ENST00000547486 CATSPER4Q7RTX7 472 aa14.93□□□□□ -0.02
CPSF6-204ENST00000547486 TPH2Q8IWU9 490 aa14.93□□□□□ -0.02
CPSF6-204ENST00000547486 SLFN12Q8IYM2 578 aa14.93□□□□□ -0.02
CPSF6-204ENST00000547486 SLC39A11Q8N1S5 342 aa14.93□□□□□ -0.02
CPSF6-204ENST00000547486 SMRP1Q8NCR6 262 aa14.93□□□□□ -0.02
CPSF6-204ENST00000547486 SLC7A3Q8WY07 619 aa14.93□□□□□ -0.02
CPSF6-204ENST00000547486 HSD17B14Q9BPX1 270 aa14.93□□□□□ -0.02
CPSF6-204ENST00000547486 TCF25Q9BQ70 676 aa14.93□□□□□ -0.02
CPSF6-204ENST00000547486 JPH2Q9BR39 696 aaPredicted RBP14.93□□□□□ -0.02
CPSF6-204ENST00000547486 INO80BQ9C086 356 aaPredicted RBP14.93□□□□□ -0.02
CPSF6-204ENST00000547486 ZSWIM4Q9H7M6 989 aa14.93□□□□□ -0.02
CPSF6-204ENST00000547486 SPG21Q9NZD8 308 aa14.93□□□□□ -0.02
CPSF6-204ENST00000547486 PUF60Q9UHX1 559 aaKnown RBP14.93□□□□□ -0.02
CPSF6-204ENST00000547486 PIN4Q9Y237 131 aaKnown RBP14.93□□□□□ -0.02
CPSF6-204ENST00000547486 COL4A3BPQ9Y5P4 624 aa14.93□□□□□ -0.02
CPSF6-204ENST00000547486 PLXNA4Q9HCM2 1894 aa14.93□□□□□ -0.02
CPSF6-204ENST00000547486 A0A087WWV3 80 aa14.92□□□□□ -0.02
CPSF6-204ENST00000547486 ZNF623O75123 536 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms