RNA–Protein interactions for RNA: ENST00000547063.5

TRAFD1-203, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 3

Gene TRAFD1, Length 867 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-203ENST00000547063 NPTX2P47972 431 aa17.46■□□□□ 0.39
TRAFD1-203ENST00000547063 GJA8P48165 433 aa17.46■□□□□ 0.39
TRAFD1-203ENST00000547063 ZNF165P49910 485 aa17.46■□□□□ 0.39
TRAFD1-203ENST00000547063 CLCN3P51790 818 aa17.46■□□□□ 0.39
TRAFD1-203ENST00000547063 NCKAP1LP55160 1127 aa17.46■□□□□ 0.39
TRAFD1-203ENST00000547063 RSPH3Q86UC2 560 aa17.46■□□□□ 0.39
TRAFD1-203ENST00000547063 ADSSL1Q8N142 457 aa17.46■□□□□ 0.39
TRAFD1-203ENST00000547063 NME8Q8N427 588 aa17.46■□□□□ 0.39
TRAFD1-203ENST00000547063 KIAA0895Q8NCT3 520 aa17.46■□□□□ 0.39
TRAFD1-203ENST00000547063 DEPTORQ8TB45 409 aa17.46■□□□□ 0.39
TRAFD1-203ENST00000547063 KCNN1Q92952 543 aa17.46■□□□□ 0.39
TRAFD1-203ENST00000547063 BPIFA3Q9BQP9 254 aa17.46■□□□□ 0.39
TRAFD1-203ENST00000547063 DNAJC25Q9H1X3 360 aa17.46■□□□□ 0.39
TRAFD1-203ENST00000547063 C2orf40Q9H1Z8 148 aa17.46■□□□□ 0.39
TRAFD1-203ENST00000547063 POLD4Q9HCU8 107 aa17.46■□□□□ 0.39
TRAFD1-203ENST00000547063 AKT3Q9Y243 479 aa17.46■□□□□ 0.39
TRAFD1-203ENST00000547063 EVPLQ92817 2033 aa17.46■□□□□ 0.39
TRAFD1-203ENST00000547063 BICDL2A1A5D9 508 aa17.45■□□□□ 0.38
TRAFD1-203ENST00000547063 PPP1R3GB7ZBB8 358 aa17.45■□□□□ 0.38
TRAFD1-203ENST00000547063 GLRA2P23416 452 aa17.45■□□□□ 0.38
TRAFD1-203ENST00000547063 PRCPP42785 496 aa17.45■□□□□ 0.38
TRAFD1-203ENST00000547063 EFNA5P52803 228 aa17.45■□□□□ 0.38
TRAFD1-203ENST00000547063 SOX10P56693 466 aa17.45■□□□□ 0.38
TRAFD1-203ENST00000547063 LAMTOR4Q0VGL1 99 aa17.45■□□□□ 0.38
TRAFD1-203ENST00000547063 PAK1Q13153 545 aa17.45■□□□□ 0.38
TRAFD1-203ENST00000547063 MKRN4PQ13434 485 aaPredicted RBP17.45■□□□□ 0.38
TRAFD1-203ENST00000547063 BMT2Q1RMZ1 405 aa17.45■□□□□ 0.38
TRAFD1-203ENST00000547063 L1TD1Q5T7N2 865 aaKnown RBP17.45■□□□□ 0.38
TRAFD1-203ENST00000547063 EPM2AIP1Q7L775 607 aaPredicted RBP17.45■□□□□ 0.38
TRAFD1-203ENST00000547063 HAUS6Q7Z4H7 955 aa17.45■□□□□ 0.38
TRAFD1-203ENST00000547063 RHPN2Q8IUC4 686 aa17.45■□□□□ 0.38
TRAFD1-203ENST00000547063 ZBTB8OSQ8IWT0 167 aa17.45■□□□□ 0.38
TRAFD1-203ENST00000547063 SMYD4Q8IYR2 804 aaPredicted RBP17.45■□□□□ 0.38
TRAFD1-203ENST00000547063 FAM200AQ8TCP9 573 aa17.45■□□□□ 0.38
TRAFD1-203ENST00000547063 ASAP3Q8TDY4 903 aa17.45■□□□□ 0.38
TRAFD1-203ENST00000547063 MCOLN1Q9GZU1 580 aa17.45■□□□□ 0.38
TRAFD1-203ENST00000547063 EXOC7Q9UPT5 735 aa17.45■□□□□ 0.38
TRAFD1-203ENST00000547063 LRRIQ4A6NIV6 560 aa17.44■□□□□ 0.38
TRAFD1-203ENST00000547063 SMTNL1A8MU46 457 aa17.44■□□□□ 0.38
TRAFD1-203ENST00000547063 SLC16A4O15374 487 aa17.44■□□□□ 0.38
TRAFD1-203ENST00000547063 TREHO43280 583 aa17.44■□□□□ 0.38
TRAFD1-203ENST00000547063 NMT1P30419 496 aaKnown RBP17.44■□□□□ 0.38
TRAFD1-203ENST00000547063 GTF2BQ00403 316 aa17.44■□□□□ 0.38
TRAFD1-203ENST00000547063 FOXR2Q6PJQ5 311 aa17.44■□□□□ 0.38
TRAFD1-203ENST00000547063 C11orf57Q6ZUT1 292 aaPredicted RBP17.44■□□□□ 0.38
TRAFD1-203ENST00000547063 ZNF410Q86VK4 478 aa17.44■□□□□ 0.38
TRAFD1-203ENST00000547063 KIAA0319LQ8IZA0 1049 aa17.44■□□□□ 0.38
TRAFD1-203ENST00000547063 SLC43A3Q8NBI5 491 aa17.44■□□□□ 0.38
TRAFD1-203ENST00000547063 ZNF507Q8TCN5 953 aa17.44■□□□□ 0.38
TRAFD1-203ENST00000547063 HPS3Q969F9 1004 aa17.44■□□□□ 0.38
TRAFD1-203ENST00000547063 FIZ1Q96SL8 496 aa17.44■□□□□ 0.38
TRAFD1-203ENST00000547063 NFKBIZQ9BYH8 718 aa17.44■□□□□ 0.38
TRAFD1-203ENST00000547063 TMEM206Q9H813 350 aa17.44■□□□□ 0.38
TRAFD1-203ENST00000547063 ARHGAP28Q9P2N2 729 aa17.44■□□□□ 0.38
TRAFD1-203ENST00000547063 RWDD2AQ9UIY3 292 aa17.44■□□□□ 0.38
TRAFD1-203ENST00000547063 NOD1Q9Y239 953 aa17.44■□□□□ 0.38
TRAFD1-203ENST00000547063 BECN2A8MW95 431 aa17.43■□□□□ 0.38
TRAFD1-203ENST00000547063 ARVCFO00192 962 aa17.43■□□□□ 0.38
TRAFD1-203ENST00000547063 CCNE1P24864 410 aa17.43■□□□□ 0.38
TRAFD1-203ENST00000547063 PHKA2P46019 1235 aa17.43■□□□□ 0.38
TRAFD1-203ENST00000547063 DRP2Q13474 957 aa17.43■□□□□ 0.38
TRAFD1-203ENST00000547063 CAPSQ13938 189 aa17.43■□□□□ 0.38
TRAFD1-203ENST00000547063 PTGISQ16647 500 aa17.43■□□□□ 0.38
TRAFD1-203ENST00000547063 KNOP1Q1ED39 458 aaKnown RBP17.43■□□□□ 0.38
TRAFD1-203ENST00000547063 KLHL10Q6JEL2 608 aa17.43■□□□□ 0.38
TRAFD1-203ENST00000547063 GDF6Q6KF10 455 aaPredicted RBP17.43■□□□□ 0.38
TRAFD1-203ENST00000547063 PPP4R3CPQ6ZMV5 832 aa17.43■□□□□ 0.38
TRAFD1-203ENST00000547063 SERINC5Q86VE9 423 aa17.43■□□□□ 0.38
TRAFD1-203ENST00000547063 RNF149Q8NC42 400 aa17.43■□□□□ 0.38
TRAFD1-203ENST00000547063 TMEM161BQ8NDZ6 487 aa17.43■□□□□ 0.38
TRAFD1-203ENST00000547063 SCFD1Q8WVM8 642 aa17.43■□□□□ 0.38
TRAFD1-203ENST00000547063 BSNDQ8WZ55 320 aa17.43■□□□□ 0.38
TRAFD1-203ENST00000547063 ACCSQ96QU6 501 aa17.43■□□□□ 0.38
TRAFD1-203ENST00000547063 TSG101Q99816 390 aa17.43■□□□□ 0.38
TRAFD1-203ENST00000547063 STRA6Q9BX79 667 aa17.43■□□□□ 0.38
TRAFD1-203ENST00000547063 TMEM134Q9H6X4 195 aa17.43■□□□□ 0.38
TRAFD1-203ENST00000547063 MAPK8IP1Q9UQF2 711 aa17.43■□□□□ 0.38
TRAFD1-203ENST00000547063 GRIN2DO15399 1336 aa17.43■□□□□ 0.38
TRAFD1-203ENST00000547063 MROH7Q68CQ1 1323 aa17.43■□□□□ 0.38
TRAFD1-203ENST00000547063 DENND3A2RUS2 1198 aa17.42■□□□□ 0.38
TRAFD1-203ENST00000547063 K7ERI5 159 aa17.42■□□□□ 0.38
TRAFD1-203ENST00000547063 M0QZ92 97 aa17.42■□□□□ 0.38
TRAFD1-203ENST00000547063 IKBKBO14920 756 aa17.42■□□□□ 0.38
TRAFD1-203ENST00000547063 PPP1R37O75864 691 aa17.42■□□□□ 0.38
TRAFD1-203ENST00000547063 SRGAP2CP0DJJ0 459 aa17.42■□□□□ 0.38
TRAFD1-203ENST00000547063 MYBP10242 640 aa17.42■□□□□ 0.38
TRAFD1-203ENST00000547063 CD44P16070 742 aaKnown RBP17.42■□□□□ 0.38
TRAFD1-203ENST00000547063 SNRPFP62306 86 aaKnown RBP17.42■□□□□ 0.38
TRAFD1-203ENST00000547063 TPM4P67936 248 aa17.42■□□□□ 0.38
TRAFD1-203ENST00000547063 MYL5Q02045 173 aa17.42■□□□□ 0.38
TRAFD1-203ENST00000547063 LRRC63Q05C16 580 aa17.42■□□□□ 0.38
TRAFD1-203ENST00000547063 STRN3Q13033 797 aa17.42■□□□□ 0.38
TRAFD1-203ENST00000547063 PTK7Q13308 1070 aa17.42■□□□□ 0.38
TRAFD1-203ENST00000547063 CDCA2Q69YH5 1023 aaPredicted RBP17.42■□□□□ 0.38
TRAFD1-203ENST00000547063 RPAINQ86UA6 219 aa17.42■□□□□ 0.38
TRAFD1-203ENST00000547063 IFNLR1Q8IU57 520 aaPredicted RBP17.42■□□□□ 0.38
TRAFD1-203ENST00000547063 GOLGA5Q8TBA6 731 aa17.42■□□□□ 0.38
TRAFD1-203ENST00000547063 ENOX1Q8TC92 643 aaKnown RBP17.42■□□□□ 0.38
TRAFD1-203ENST00000547063 NELFBQ8WX92 580 aa17.42■□□□□ 0.38
TRAFD1-203ENST00000547063 P2RX5Q93086 422 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms