RNA–Protein interactions for RNA: ENST00000546735.5

TROAP-203, Transcript of trophinin associated protein, humanhuman

TSL 1 (best)

Gene TROAP, Length 1,213 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-203ENST00000546735 KCNT2Q6UVM3 1135 aa16.06■□□□□ 0.16
TROAP-203ENST00000546735 ZNF598Q86UK7 904 aaKnown RBP16.06■□□□□ 0.16
TROAP-203ENST00000546735 POTEDQ86YR6 584 aa16.06■□□□□ 0.16
TROAP-203ENST00000546735 ZNF710Q8N1W2 664 aa16.06■□□□□ 0.16
TROAP-203ENST00000546735 LRRC43Q8N309 656 aa16.06■□□□□ 0.16
TROAP-203ENST00000546735 VN1R2Q8NFZ6 395 aa16.06■□□□□ 0.16
TROAP-203ENST00000546735 HELQQ8TDG4 1101 aa16.06■□□□□ 0.16
TROAP-203ENST00000546735 MRPS27Q92552 414 aaKnown RBP16.06■□□□□ 0.16
TROAP-203ENST00000546735 HAS1Q92839 578 aa16.06■□□□□ 0.16
TROAP-203ENST00000546735 NLRP4Q96MN2 994 aa16.06■□□□□ 0.16
TROAP-203ENST00000546735 PPP4R2Q9NY27 417 aa16.06■□□□□ 0.16
TROAP-203ENST00000546735 FSCN2O14926 492 aa16.05■□□□□ 0.16
TROAP-203ENST00000546735 DCXO43602 365 aa16.05■□□□□ 0.16
TROAP-203ENST00000546735 ALADP13716 330 aa16.05■□□□□ 0.16
TROAP-203ENST00000546735 FDPSP14324 419 aaKnown RBP16.05■□□□□ 0.16
TROAP-203ENST00000546735 QARSP47897 775 aaKnown RBP16.05■□□□□ 0.16
TROAP-203ENST00000546735 DNM2P50570 870 aa16.05■□□□□ 0.16
TROAP-203ENST00000546735 NR5A1Q13285 461 aa16.05■□□□□ 0.16
TROAP-203ENST00000546735 PPP2R5CQ13362 524 aa16.05■□□□□ 0.16
TROAP-203ENST00000546735 DUSP6Q16828 381 aa16.05■□□□□ 0.16
TROAP-203ENST00000546735 LPPQ93052 612 aa16.05■□□□□ 0.16
TROAP-203ENST00000546735 ZNF558Q96NG5 402 aa16.05■□□□□ 0.16
TROAP-203ENST00000546735 TCF25Q9BQ70 676 aa16.05■□□□□ 0.16
TROAP-203ENST00000546735 CYP26B1Q9NR63 512 aa16.05■□□□□ 0.16
TROAP-203ENST00000546735 HIDE1A8MVS5 230 aa16.04■□□□□ 0.16
TROAP-203ENST00000546735 NT5C1B-RDH14C9J2C7 533 aa16.04■□□□□ 0.16
TROAP-203ENST00000546735 MARCH6O60337 910 aa16.04■□□□□ 0.16
TROAP-203ENST00000546735 EYA4O95677 639 aa16.04■□□□□ 0.16
TROAP-203ENST00000546735 GCFC2P16383 781 aaKnown RBP16.04■□□□□ 0.16
TROAP-203ENST00000546735 FOSBP53539 338 aa16.04■□□□□ 0.16
TROAP-203ENST00000546735 ANAPC15P60006 121 aa16.04■□□□□ 0.16
TROAP-203ENST00000546735 PLCB3Q01970 1234 aa16.04■□□□□ 0.16
TROAP-203ENST00000546735 COASYQ13057 564 aa16.04■□□□□ 0.16
TROAP-203ENST00000546735 ME3Q16798 604 aa16.04■□□□□ 0.16
TROAP-203ENST00000546735 CSPP1Q1MSJ5 1256 aa16.04■□□□□ 0.16
TROAP-203ENST00000546735 NCAPH2Q6IBW4 605 aa16.04■□□□□ 0.16
TROAP-203ENST00000546735 SMRP1Q8NCR6 262 aa16.04■□□□□ 0.16
TROAP-203ENST00000546735 CEP170P1Q96L14 293 aa16.04■□□□□ 0.16
TROAP-203ENST00000546735 FAM20AQ96MK3 541 aa16.04■□□□□ 0.16
TROAP-203ENST00000546735 ENTPD7Q9NQZ7 604 aa16.04■□□□□ 0.16
TROAP-203ENST00000546735 DACT1Q9NYF0 836 aa16.04■□□□□ 0.16
TROAP-203ENST00000546735 RGL1Q9NZL6 768 aa16.04■□□□□ 0.16
TROAP-203ENST00000546735 PUF60Q9UHX1 559 aaKnown RBP16.04■□□□□ 0.16
TROAP-203ENST00000546735 MUTYHQ9UIF7 546 aa16.04■□□□□ 0.16
TROAP-203ENST00000546735 PIN4Q9Y237 131 aaKnown RBP16.04■□□□□ 0.16
TROAP-203ENST00000546735 USP15Q9Y4E8 981 aaPredicted RBP16.04■□□□□ 0.16
TROAP-203ENST00000546735 MEIS3P2A8K0S8 358 aa16.03■□□□□ 0.16
TROAP-203ENST00000546735 ZBTB39O15060 712 aa16.03■□□□□ 0.16
TROAP-203ENST00000546735 EOMESO95936 686 aa16.03■□□□□ 0.16
TROAP-203ENST00000546735 P4HBP07237 508 aaKnown RBP16.03■□□□□ 0.16
TROAP-203ENST00000546735 SFPQP23246 707 aaKnown RBP eCLIP16.03■□□□□ 0.16
TROAP-203ENST00000546735 KRT2P35908 639 aa16.03■□□□□ 0.16
TROAP-203ENST00000546735 PHKA2P46019 1235 aa16.03■□□□□ 0.16
TROAP-203ENST00000546735 CYP4A11Q02928 519 aa16.03■□□□□ 0.16
TROAP-203ENST00000546735 ANKRD1Q15327 319 aa16.03■□□□□ 0.16
TROAP-203ENST00000546735 EPHA7Q15375 998 aa16.03■□□□□ 0.16
TROAP-203ENST00000546735 TWF2Q6IBS0 349 aaKnown RBP16.03■□□□□ 0.16
TROAP-203ENST00000546735 LLGL2Q6P1M3 1020 aa16.03■□□□□ 0.16
TROAP-203ENST00000546735 CATSPER4Q7RTX7 472 aa16.03■□□□□ 0.16
TROAP-203ENST00000546735 ZNF410Q86VK4 478 aa16.03■□□□□ 0.16
TROAP-203ENST00000546735 RNF135Q8IUD6 432 aa16.03■□□□□ 0.16
TROAP-203ENST00000546735 SLC39A11Q8N1S5 342 aa16.03■□□□□ 0.16
TROAP-203ENST00000546735 TMEM143Q96AN5 459 aa16.03■□□□□ 0.16
TROAP-203ENST00000546735 FAM122AQ96E09 287 aa16.03■□□□□ 0.16
TROAP-203ENST00000546735 DYDC2Q96IM9 177 aa16.03■□□□□ 0.16
TROAP-203ENST00000546735 LXNQ9BS40 222 aa16.03■□□□□ 0.16
TROAP-203ENST00000546735 CHST12Q9NRB3 414 aa16.03■□□□□ 0.16
TROAP-203ENST00000546735 SPG21Q9NZD8 308 aa16.03■□□□□ 0.16
TROAP-203ENST00000546735 LZTS1Q9Y250 596 aa16.03■□□□□ 0.16
TROAP-203ENST00000546735 HCN4Q9Y3Q4 1203 aa16.03■□□□□ 0.16
TROAP-203ENST00000546735 PRR33A8MZF0 331 aa16.02■□□□□ 0.16
TROAP-203ENST00000546735 JAK2O60674 1132 aa16.02■□□□□ 0.16
TROAP-203ENST00000546735 PLA2G5P39877 138 aa16.02■□□□□ 0.16
TROAP-203ENST00000546735 POLGP54098 1239 aaPredicted RBP16.02■□□□□ 0.16
TROAP-203ENST00000546735 CDC42EP1Q00587 391 aa16.02■□□□□ 0.16
TROAP-203ENST00000546735 CTTNQ14247 550 aaKnown RBP16.02■□□□□ 0.16
TROAP-203ENST00000546735 NSUN7Q8NE18 718 aaKnown RBP16.02■□□□□ 0.16
TROAP-203ENST00000546735 WASF1Q92558 559 aa16.02■□□□□ 0.16
TROAP-203ENST00000546735 TNFRSF25Q93038 417 aa16.02■□□□□ 0.16
TROAP-203ENST00000546735 GTF3C6Q969F1 213 aa16.02■□□□□ 0.16
TROAP-203ENST00000546735 POP1Q99575 1024 aaKnown RBP16.02■□□□□ 0.16
TROAP-203ENST00000546735 APOL5Q9BWW9 433 aa16.02■□□□□ 0.16
TROAP-203ENST00000546735 IFT122Q9HBG6 1241 aa16.02■□□□□ 0.16
TROAP-203ENST00000546735 COL4A3BPQ9Y5P4 624 aa16.02■□□□□ 0.16
TROAP-203ENST00000546735 TBX3O15119 743 aa16.01■□□□□ 0.15
TROAP-203ENST00000546735 DKC1O60832 514 aaKnown RBP eCLIP16.01■□□□□ 0.15
TROAP-203ENST00000546735 SRGAP2CP0DJJ0 459 aa16.01■□□□□ 0.15
TROAP-203ENST00000546735 YWHABP31946 246 aaKnown RBP16.01■□□□□ 0.15
TROAP-203ENST00000546735 PPM1AP35813 382 aa16.01■□□□□ 0.15
TROAP-203ENST00000546735 BCAR1P56945 870 aa16.01■□□□□ 0.15
TROAP-203ENST00000546735 KRT17Q04695 432 aa16.01■□□□□ 0.15
TROAP-203ENST00000546735 SPIRE1Q08AE8 756 aa16.01■□□□□ 0.15
TROAP-203ENST00000546735 PDE12Q6L8Q7 609 aaKnown RBP16.01■□□□□ 0.15
TROAP-203ENST00000546735 TMC7Q7Z402 723 aa16.01■□□□□ 0.15
TROAP-203ENST00000546735 TMEM173Q86WV6 379 aaPredicted RBP16.01■□□□□ 0.15
TROAP-203ENST00000546735 PRPF31Q8WWY3 499 aaKnown RBP16.01■□□□□ 0.15
TROAP-203ENST00000546735 SLC7A3Q8WY07 619 aa16.01■□□□□ 0.15
TROAP-203ENST00000546735 CDCA3Q99618 268 aaPredicted RBP16.01■□□□□ 0.15
TROAP-203ENST00000546735 NAP1L4Q99733 375 aaKnown RBP16.01■□□□□ 0.15
TROAP-203ENST00000546735 JPH2Q9BR39 696 aaPredicted RBP16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms