RNA–Protein interactions for RNA: ENST00000546304.1

PRKDC-211, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-211ENST00000546304 RBM47A0AV96 593 aaKnown RBP7.16□□□□□ -1.26
PRKDC-211ENST00000546304 MEIS1O00470 390 aa7.16□□□□□ -1.26
PRKDC-211ENST00000546304 MSTNO14793 375 aa7.16□□□□□ -1.26
PRKDC-211ENST00000546304 NKRFO15226 690 aaKnown RBP eCLIP7.16□□□□□ -1.26
PRKDC-211ENST00000546304 SLC37A4O43826 429 aa7.16□□□□□ -1.26
PRKDC-211ENST00000546304 NEMFO60524 1076 aa7.16□□□□□ -1.26
PRKDC-211ENST00000546304 CCNT1O60563 726 aaKnown RBP7.16□□□□□ -1.26
PRKDC-211ENST00000546304 DUSP11O75319 330 aaKnown RBP7.16□□□□□ -1.26
PRKDC-211ENST00000546304 TXNP10599 105 aaKnown RBP7.16□□□□□ -1.26
PRKDC-211ENST00000546304 PTGS1P23219 599 aa7.16□□□□□ -1.26
PRKDC-211ENST00000546304 TARSP26639 723 aaKnown RBP7.16□□□□□ -1.26
PRKDC-211ENST00000546304 ICAM3P32942 547 aa7.16□□□□□ -1.26
PRKDC-211ENST00000546304 TRAPPC10P48553 1259 aa7.16□□□□□ -1.26
PRKDC-211ENST00000546304 USP11P51784 963 aa7.16□□□□□ -1.26
PRKDC-211ENST00000546304 TNFAIP2Q03169 654 aa7.16□□□□□ -1.26
PRKDC-211ENST00000546304 RESTQ13127 1097 aa7.16□□□□□ -1.26
PRKDC-211ENST00000546304 PKP1Q13835 747 aa7.16□□□□□ -1.26
PRKDC-211ENST00000546304 DUSP28Q4G0W2 176 aa7.16□□□□□ -1.26
PRKDC-211ENST00000546304 PRR16Q569H4 304 aa7.16□□□□□ -1.26
PRKDC-211ENST00000546304 FAM26DQ5JW98 314 aa7.16□□□□□ -1.26
PRKDC-211ENST00000546304 TTC38Q5R3I4 469 aa7.16□□□□□ -1.26
PRKDC-211ENST00000546304 GJC2Q5T442 439 aaPredicted RBP7.16□□□□□ -1.26
PRKDC-211ENST00000546304 ANO1Q5XXA6 986 aa7.16□□□□□ -1.26
PRKDC-211ENST00000546304 PPP4R3AQ6IN85 833 aa7.16□□□□□ -1.26
PRKDC-211ENST00000546304 CCDC62Q6P9F0 684 aa7.16□□□□□ -1.26
PRKDC-211ENST00000546304 KCNV1Q6PIU1 500 aa7.16□□□□□ -1.26
PRKDC-211ENST00000546304 PLA2G4DQ86XP0 818 aa7.16□□□□□ -1.26
PRKDC-211ENST00000546304 RGL4Q8IZJ4 473 aa7.16□□□□□ -1.26
PRKDC-211ENST00000546304 CYP2W1Q8TAV3 490 aa7.16□□□□□ -1.26
PRKDC-211ENST00000546304 MBOAT7Q96N66 472 aa7.16□□□□□ -1.26
PRKDC-211ENST00000546304 DEFB118Q96PH6 123 aa7.16□□□□□ -1.26
PRKDC-211ENST00000546304 NAP1L4Q99733 375 aaKnown RBP7.16□□□□□ -1.26
PRKDC-211ENST00000546304 MXRA8Q9BRK3 442 aa7.16□□□□□ -1.26
PRKDC-211ENST00000546304 WDR11Q9BZH6 1224 aa7.16□□□□□ -1.26
PRKDC-211ENST00000546304 RNF208Q9H0X6 261 aa7.16□□□□□ -1.26
PRKDC-211ENST00000546304 IGFLR1Q9H665 355 aa7.16□□□□□ -1.26
PRKDC-211ENST00000546304 JADE2Q9NQC1 790 aa7.16□□□□□ -1.26
PRKDC-211ENST00000546304 XPNPEP3Q9NQH7 507 aa7.16□□□□□ -1.26
PRKDC-211ENST00000546304 KCNH7Q9NS40 1196 aa7.16□□□□□ -1.26
PRKDC-211ENST00000546304 FAM13BQ9NYF5 915 aa7.16□□□□□ -1.26
PRKDC-211ENST00000546304 STIM2Q9P246 746 aa7.16□□□□□ -1.26
PRKDC-211ENST00000546304 DDX25Q9UHL0 483 aaKnown RBP7.16□□□□□ -1.26
PRKDC-211ENST00000546304 FAM184BQ9ULE4 1060 aa7.16□□□□□ -1.26
PRKDC-211ENST00000546304 GNEQ9Y223 722 aaKnown RBP7.16□□□□□ -1.26
PRKDC-211ENST00000546304 LOXHD1Q8IVV2 1947 aa7.16□□□□□ -1.26
PRKDC-211ENST00000546304 ALPK3Q96L96 1907 aa7.15□□□□□ -1.26
PRKDC-211ENST00000546304 KAT6AQ92794 2004 aa7.15□□□□□ -1.26
PRKDC-211ENST00000546304 CYP3A7-CYP3A51PA0A087WV96 503 aa7.15□□□□□ -1.26
PRKDC-211ENST00000546304 IPO5O00410 1097 aaKnown RBP7.15□□□□□ -1.26
PRKDC-211ENST00000546304 EDIL3O43854 480 aa7.15□□□□□ -1.26
PRKDC-211ENST00000546304 LILRB5O75023 590 aa7.15□□□□□ -1.26
PRKDC-211ENST00000546304 XYLBO75191 536 aa7.15□□□□□ -1.26
PRKDC-211ENST00000546304 SASH3O75995 380 aa7.15□□□□□ -1.26
PRKDC-211ENST00000546304 FARP2O94887 1054 aaPredicted RBP7.15□□□□□ -1.26
PRKDC-211ENST00000546304 GGPS1O95749 300 aa7.15□□□□□ -1.26
PRKDC-211ENST00000546304 F13A1P00488 732 aa7.15□□□□□ -1.26
PRKDC-211ENST00000546304 GH1P01241 217 aa7.15□□□□□ -1.26
PRKDC-211ENST00000546304 PROCP04070 461 aa7.15□□□□□ -1.26
PRKDC-211ENST00000546304 GJB1P08034 283 aa7.15□□□□□ -1.26
PRKDC-211ENST00000546304 ZSCAN22P10073 491 aaPredicted RBP7.15□□□□□ -1.26
PRKDC-211ENST00000546304 RARAP10276 462 aa7.15□□□□□ -1.26
PRKDC-211ENST00000546304 TGFB3P10600 412 aa7.15□□□□□ -1.26
PRKDC-211ENST00000546304 PDIA4P13667 645 aaKnown RBP7.15□□□□□ -1.26
PRKDC-211ENST00000546304 NID1P14543 1247 aa7.15□□□□□ -1.26
PRKDC-211ENST00000546304 KCNA2P16389 499 aa7.15□□□□□ -1.26
PRKDC-211ENST00000546304 ATP2B1P20020 1258 aa7.15□□□□□ -1.26
PRKDC-211ENST00000546304 CYP3A7P24462 503 aa7.15□□□□□ -1.26
PRKDC-211ENST00000546304 ARHGAP1Q07960 439 aa7.15□□□□□ -1.26
PRKDC-211ENST00000546304 TBC1D8BQ0IIM8 1120 aa7.15□□□□□ -1.26
PRKDC-211ENST00000546304 ITGB3BPQ13352 177 aaPredicted RBP7.15□□□□□ -1.26
PRKDC-211ENST00000546304 ORC2Q13416 577 aaPredicted RBP7.15□□□□□ -1.26
PRKDC-211ENST00000546304 NEDD9Q14511 834 aa7.15□□□□□ -1.26
PRKDC-211ENST00000546304 LY6KQ17RY6 165 aa7.15□□□□□ -1.26
PRKDC-211ENST00000546304 Q4G0T1 1027 aa7.15□□□□□ -1.26
PRKDC-211ENST00000546304 RILPL1Q5EBL4 403 aa7.15□□□□□ -1.26
PRKDC-211ENST00000546304 TMEM63BQ5T3F8 832 aa7.15□□□□□ -1.26
PRKDC-211ENST00000546304 METTL7BQ6UX53 244 aa7.15□□□□□ -1.26
PRKDC-211ENST00000546304 OR6J1Q8NGC5 347 aa7.15□□□□□ -1.26
PRKDC-211ENST00000546304 ETNPPLQ8TBG4 499 aa7.15□□□□□ -1.26
PRKDC-211ENST00000546304 U2AF1L4Q8WU68 220 aaKnown RBP7.15□□□□□ -1.26
PRKDC-211ENST00000546304 COPS5Q92905 334 aa7.15□□□□□ -1.26
PRKDC-211ENST00000546304 ABHD8Q96I13 439 aa7.15□□□□□ -1.26
PRKDC-211ENST00000546304 SPOCK3Q9BQ16 436 aa7.15□□□□□ -1.26
PRKDC-211ENST00000546304 SENP7Q9BQF6 1050 aa7.15□□□□□ -1.26
PRKDC-211ENST00000546304 UPF3AQ9H1J1 476 aaKnown RBP7.15□□□□□ -1.26
PRKDC-211ENST00000546304 AGO4Q9HCK5 861 aaKnown RBP7.15□□□□□ -1.26
PRKDC-211ENST00000546304 JPH1Q9HDC5 661 aaPredicted RBP7.15□□□□□ -1.26
PRKDC-211ENST00000546304 DDX41Q9UJV9 622 aaKnown RBP7.15□□□□□ -1.26
PRKDC-211ENST00000546304 NAGPAQ9UK23 515 aa7.15□□□□□ -1.26
PRKDC-211ENST00000546304 USP20Q9Y2K6 914 aa7.15□□□□□ -1.26
PRKDC-211ENST00000546304 MYADML2A6NDP7 307 aa7.14□□□□□ -1.27
PRKDC-211ENST00000546304 NOP56O00567 594 aaKnown RBP7.14□□□□□ -1.27
PRKDC-211ENST00000546304 MSH4O15457 936 aa7.14□□□□□ -1.27
PRKDC-211ENST00000546304 MAFGO15525 162 aa7.14□□□□□ -1.27
PRKDC-211ENST00000546304 SORBS3O60504 671 aa7.14□□□□□ -1.27
PRKDC-211ENST00000546304 ADAMTS4O75173 837 aa7.14□□□□□ -1.27
PRKDC-211ENST00000546304 NFASCO94856 1347 aa7.14□□□□□ -1.27
PRKDC-211ENST00000546304 BRD1O95696 1058 aa7.14□□□□□ -1.27
PRKDC-211ENST00000546304 PGK1P00558 417 aa7.14□□□□□ -1.27
PRKDC-211ENST00000546304 C6orf222P0C671 652 aaPredicted RBP7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms