RNA–Protein interactions for RNA: ENST00000545998.1

HMGA2-211, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-211ENST00000545998 HIP1RO75146 1068 aa22.7■■□□□ 1.22
HMGA2-211ENST00000545998 RPS6KA5O75582 802 aa22.7■■□□□ 1.22
HMGA2-211ENST00000545998 POU5F1BQ06416 359 aa22.7■■□□□ 1.22
HMGA2-211ENST00000545998 PAK2Q13177 524 aa22.7■■□□□ 1.22
HMGA2-211ENST00000545998 CAPSQ13938 189 aa22.7■■□□□ 1.22
HMGA2-211ENST00000545998 DHX8Q14562 1220 aaKnown RBP22.7■■□□□ 1.22
HMGA2-211ENST00000545998 RASIP1Q5U651 963 aa22.7■■□□□ 1.22
HMGA2-211ENST00000545998 FAM228AQ86W67 206 aa22.7■■□□□ 1.22
HMGA2-211ENST00000545998 GPBP1Q86WP2 473 aa22.7■■□□□ 1.22
HMGA2-211ENST00000545998 TDHQ8IZJ6 230 aa22.7■■□□□ 1.22
HMGA2-211ENST00000545998 RNF149Q8NC42 400 aa22.7■■□□□ 1.22
HMGA2-211ENST00000545998 KIFAP3Q92845 792 aa22.7■■□□□ 1.22
HMGA2-211ENST00000545998 APBB2Q92870 758 aa22.7■■□□□ 1.22
HMGA2-211ENST00000545998 POLD4Q9HCU8 107 aa22.7■■□□□ 1.22
HMGA2-211ENST00000545998 A0A1W2PQ27 194 aa22.69■■□□□ 1.22
HMGA2-211ENST00000545998 A0A1W2PQ64 194 aa22.69■■□□□ 1.22
HMGA2-211ENST00000545998 A0A1W2PQD8 194 aa22.69■■□□□ 1.22
HMGA2-211ENST00000545998 ACTN1P12814 892 aa22.69■■□□□ 1.22
HMGA2-211ENST00000545998 MAPK7Q13164 816 aa22.69■■□□□ 1.22
HMGA2-211ENST00000545998 BSNDQ8WZ55 320 aa22.69■■□□□ 1.22
HMGA2-211ENST00000545998 ERVK-5Q9HDB9 667 aa22.69■■□□□ 1.22
HMGA2-211ENST00000545998 KCNH3Q9ULD8 1083 aa22.69■■□□□ 1.22
HMGA2-211ENST00000545998 ST3GAL5Q9UNP4 418 aa22.69■■□□□ 1.22
HMGA2-211ENST00000545998 NPHP3-ACAD11A0A0J9YXS1 232 aa22.68■■□□□ 1.22
HMGA2-211ENST00000545998 POLR2DO15514 142 aaKnown RBP22.68■■□□□ 1.22
HMGA2-211ENST00000545998 BAIAP3O94812 1187 aa22.68■■□□□ 1.22
HMGA2-211ENST00000545998 RAD51AP2Q09MP3 1159 aa22.68■■□□□ 1.22
HMGA2-211ENST00000545998 TFDP1Q14186 410 aa22.68■■□□□ 1.22
HMGA2-211ENST00000545998 IQUBQ8NA54 791 aa22.68■■□□□ 1.22
HMGA2-211ENST00000545998 CXXC1Q9P0U4 656 aaPredicted RBP22.68■■□□□ 1.22
HMGA2-211ENST00000545998 HPSEQ9Y251 543 aa22.68■■□□□ 1.22
HMGA2-211ENST00000545998 FAM237AA0A1B0GTK4 181 aa22.67■■□□□ 1.22
HMGA2-211ENST00000545998 A0A1B0GVL5 298 aa22.67■■□□□ 1.22
HMGA2-211ENST00000545998 A0A1W2PPC1 479 aa22.67■■□□□ 1.22
HMGA2-211ENST00000545998 GPR182O15218 404 aa22.67■■□□□ 1.22
HMGA2-211ENST00000545998 CSDE1O75534 798 aaKnown RBP22.67■■□□□ 1.22
HMGA2-211ENST00000545998 PFKFB1P16118 471 aa22.67■■□□□ 1.22
HMGA2-211ENST00000545998 PTENP60484 403 aa22.67■■□□□ 1.22
HMGA2-211ENST00000545998 IKBKEQ14164 716 aa22.67■■□□□ 1.22
HMGA2-211ENST00000545998 SV2BQ7L1I2 683 aa22.67■■□□□ 1.22
HMGA2-211ENST00000545998 SRGAP1Q7Z6B7 1085 aa22.67■■□□□ 1.22
HMGA2-211ENST00000545998 IFNLR1Q8IU57 520 aaPredicted RBP22.67■■□□□ 1.22
HMGA2-211ENST00000545998 DHX58Q96C10 678 aa22.67■■□□□ 1.22
HMGA2-211ENST00000545998 RNPC3Q96LT9 517 aaKnown RBP22.67■■□□□ 1.22
HMGA2-211ENST00000545998 DRC1Q96MC2 740 aa22.67■■□□□ 1.22
HMGA2-211ENST00000545998 NFKBIZQ9BYH8 718 aa22.67■■□□□ 1.22
HMGA2-211ENST00000545998 CUEDC2Q9H467 287 aa22.67■■□□□ 1.22
HMGA2-211ENST00000545998 ABHD14A-ACY1A0A1B0GW23 586 aa22.67■■□□□ 1.22
HMGA2-211ENST00000545998 PHKA2P46019 1235 aa22.67■■□□□ 1.22
HMGA2-211ENST00000545998 NFX1Q12986 1120 aaKnown RBP22.67■■□□□ 1.22
HMGA2-211ENST00000545998 ODR4Q5SWX8 454 aa22.67■■□□□ 1.22
HMGA2-211ENST00000545998 INO80BQ9C086 356 aaPredicted RBP22.67■■□□□ 1.22
HMGA2-211ENST00000545998 TMX1Q9H3N1 280 aa22.67■■□□□ 1.22
HMGA2-211ENST00000545998 MINDY3Q9H8M7 445 aa22.67■■□□□ 1.22
HMGA2-211ENST00000545998 PTPRSQ13332 1948 aa22.66■■□□□ 1.22
HMGA2-211ENST00000545998 EFCAB14O75071 495 aa22.66■■□□□ 1.22
HMGA2-211ENST00000545998 FGFR4P22455 802 aa22.66■■□□□ 1.22
HMGA2-211ENST00000545998 NAMPTP43490 491 aa22.66■■□□□ 1.22
HMGA2-211ENST00000545998 CDCA2Q69YH5 1023 aaPredicted RBP22.66■■□□□ 1.22
HMGA2-211ENST00000545998 IFT74Q96LB3 600 aa22.66■■□□□ 1.22
HMGA2-211ENST00000545998 REEP2Q9BRK0 252 aa22.66■■□□□ 1.22
HMGA2-211ENST00000545998 PYM1Q9BRP8 204 aaKnown RBP22.66■■□□□ 1.22
HMGA2-211ENST00000545998 MTIF3Q9H2K0 278 aaKnown RBP22.66■■□□□ 1.22
HMGA2-211ENST00000545998 ODF2LQ9ULJ1 636 aa22.66■■□□□ 1.22
HMGA2-211ENST00000545998 MYMKA6NI61 221 aa22.65■■□□□ 1.22
HMGA2-211ENST00000545998 LRRIQ4A6NIV6 560 aa22.65■■□□□ 1.22
HMGA2-211ENST00000545998 ZBBXA8MT70 800 aa22.65■■□□□ 1.22
HMGA2-211ENST00000545998 WDR5P61964 334 aaKnown RBP22.65■■□□□ 1.22
HMGA2-211ENST00000545998 CACNB1Q02641 598 aaPredicted RBP22.65■■□□□ 1.22
HMGA2-211ENST00000545998 GIT2Q14161 759 aa22.65■■□□□ 1.22
HMGA2-211ENST00000545998 PPP2R5AQ15172 486 aa22.65■■□□□ 1.22
HMGA2-211ENST00000545998 FAM43BQ6ZT52 329 aaPredicted RBP22.65■■□□□ 1.22
HMGA2-211ENST00000545998 FSIP1Q8NA03 581 aa22.65■■□□□ 1.22
HMGA2-211ENST00000545998 MRPS27Q92552 414 aaKnown RBP22.65■■□□□ 1.22
HMGA2-211ENST00000545998 FTHL17Q9BXU8 183 aa22.65■■□□□ 1.22
HMGA2-211ENST00000545998 GOLPH3LQ9H4A5 285 aa22.65■■□□□ 1.22
HMGA2-211ENST00000545998 C17orf75Q9HAS0 396 aa22.65■■□□□ 1.22
HMGA2-211ENST00000545998 KBTBD4Q9NVX7 518 aa22.65■■□□□ 1.22
HMGA2-211ENST00000545998 SZT2Q5T011 3432 aa22.65■■□□□ 1.22
HMGA2-211ENST00000545998 SFI1A8K8P3 1242 aa22.64■■□□□ 1.22
HMGA2-211ENST00000545998 SFPQP23246 707 aaKnown RBP eCLIP22.64■■□□□ 1.22
HMGA2-211ENST00000545998 NDUFA8P51970 172 aa22.64■■□□□ 1.22
HMGA2-211ENST00000545998 CSPP1Q1MSJ5 1256 aa22.64■■□□□ 1.22
HMGA2-211ENST00000545998 TPRNQ4KMQ1 711 aa22.64■■□□□ 1.22
HMGA2-211ENST00000545998 DDX12PQ92771 950 aa22.64■■□□□ 1.22
HMGA2-211ENST00000545998 TNMDQ9H2S6 317 aa22.64■■□□□ 1.22
HMGA2-211ENST00000545998 TTC3P53804 2025 aa22.64■■□□□ 1.21
HMGA2-211ENST00000545998 LOC101059915A0A1B0GWI6 518 aaPredicted RBP22.63■■□□□ 1.21
HMGA2-211ENST00000545998 KRT18P05783 430 aaKnown RBP22.63■■□□□ 1.21
HMGA2-211ENST00000545998 PLS3P13797 630 aa22.63■■□□□ 1.21
HMGA2-211ENST00000545998 NPTX2P47972 431 aa22.63■■□□□ 1.21
HMGA2-211ENST00000545998 PEX3P56589 373 aa22.63■■□□□ 1.21
HMGA2-211ENST00000545998 MBTD1Q05BQ5 628 aa22.63■■□□□ 1.21
HMGA2-211ENST00000545998 RTN4RL1Q86UN2 441 aaPredicted RBP22.63■■□□□ 1.21
HMGA2-211ENST00000545998 TMEM87AQ8NBN3 555 aa22.63■■□□□ 1.21
HMGA2-211ENST00000545998 LINC01599Q8WXQ3 324 aa22.63■■□□□ 1.21
HMGA2-211ENST00000545998 MAGEF1Q9HAY2 307 aa22.63■■□□□ 1.21
HMGA2-211ENST00000545998 SLC4A7Q9Y6M7 1214 aa22.63■■□□□ 1.21
HMGA2-211ENST00000545998 ADGRA3Q8IWK6 1321 aa22.63■■□□□ 1.21
HMGA2-211ENST00000545998 GOLGA6L4A6NEF3 574 aa22.63■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms