RNA–Protein interactions for RNA: ENST00000545493.1

SCARB1-210, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-210ENST00000545493 RGL1Q9NZL6 768 aa23.66■■□□□ 1.38
SCARB1-210ENST00000545493 A0A0U1RQF3 1178 aa23.65■■□□□ 1.38
SCARB1-210ENST00000545493 DKC1O60832 514 aaKnown RBP eCLIP23.65■■□□□ 1.381e-7■■■■□ 19.3
SCARB1-210ENST00000545493 FGF18O76093 207 aa23.65■■□□□ 1.38
SCARB1-210ENST00000545493 SFPQP23246 707 aaKnown RBP eCLIP23.65■■□□□ 1.382e-6■■□□□ 12.9
SCARB1-210ENST00000545493 DNM2P50570 870 aa23.65■■□□□ 1.38
SCARB1-210ENST00000545493 CYP4A11Q02928 519 aa23.65■■□□□ 1.38
SCARB1-210ENST00000545493 UBE3AQ05086 875 aa23.65■■□□□ 1.38
SCARB1-210ENST00000545493 C4orf19Q8IY42 314 aa23.65■■□□□ 1.38
SCARB1-210ENST00000545493 SLFN12Q8IYM2 578 aa23.65■■□□□ 1.38
SCARB1-210ENST00000545493 THNSL1Q8IYQ7 743 aa23.65■■□□□ 1.38
SCARB1-210ENST00000545493 RNF169Q8NCN4 708 aa23.65■■□□□ 1.38
SCARB1-210ENST00000545493 CEP170P1Q96L14 293 aa23.65■■□□□ 1.38
SCARB1-210ENST00000545493 JPH2Q9BR39 696 aaPredicted RBP23.65■■□□□ 1.38
SCARB1-210ENST00000545493 MARCH6O60337 910 aa23.64■■□□□ 1.37
SCARB1-210ENST00000545493 GLP2RO95838 553 aa23.64■■□□□ 1.37
SCARB1-210ENST00000545493 CENPBP07199 599 aaPredicted RBP23.64■■□□□ 1.37
SCARB1-210ENST00000545493 YWHABP31946 246 aaKnown RBP23.64■■□□□ 1.37
SCARB1-210ENST00000545493 PBX3P40426 434 aa23.64■■□□□ 1.37
SCARB1-210ENST00000545493 POLGP54098 1239 aaPredicted RBP23.64■■□□□ 1.37
SCARB1-210ENST00000545493 CDC42EP1Q00587 391 aa23.64■■□□□ 1.37
SCARB1-210ENST00000545493 CTTNQ14247 550 aaKnown RBP23.64■■□□□ 1.37
SCARB1-210ENST00000545493 SLC7A3Q8WY07 619 aa23.64■■□□□ 1.37
SCARB1-210ENST00000545493 IFT122Q9HBG6 1241 aa23.64■■□□□ 1.37
SCARB1-210ENST00000545493 TLR9Q9NR96 1032 aa23.64■■□□□ 1.37
SCARB1-210ENST00000545493 DACT1Q9NYF0 836 aa23.64■■□□□ 1.37
SCARB1-210ENST00000545493 PPME1Q9Y570 386 aa23.64■■□□□ 1.37
SCARB1-210ENST00000545493 COL4A3BPQ9Y5P4 624 aa23.64■■□□□ 1.37
SCARB1-210ENST00000545493 FSCN2O14926 492 aa23.63■■□□□ 1.37
SCARB1-210ENST00000545493 NRIP1P48552 1158 aa23.63■■□□□ 1.37
SCARB1-210ENST00000545493 ADAM15Q13444 863 aa23.63■■□□□ 1.37
SCARB1-210ENST00000545493 EMC2Q15006 297 aa23.63■■□□□ 1.37
SCARB1-210ENST00000545493 CALCRLQ16602 461 aa23.63■■□□□ 1.37
SCARB1-210ENST00000545493 CSPP1Q1MSJ5 1256 aa23.63■■□□□ 1.37
SCARB1-210ENST00000545493 C8orf34Q49A92 452 aa23.63■■□□□ 1.37
SCARB1-210ENST00000545493 ABI1Q8IZP0 508 aa23.63■■□□□ 1.37
SCARB1-210ENST00000545493 GJD3Q8N144 294 aa23.63■■□□□ 1.37
SCARB1-210ENST00000545493 HELQQ8TDG4 1101 aa23.63■■□□□ 1.37
SCARB1-210ENST00000545493 PPP2R3CQ969Q6 453 aa23.63■■□□□ 1.37
SCARB1-210ENST00000545493 PIN4Q9Y237 131 aaKnown RBP23.63■■□□□ 1.37
SCARB1-210ENST00000545493 ZBTB39O15060 712 aa23.62■■□□□ 1.37
SCARB1-210ENST00000545493 MBTPS2O43462 519 aa23.62■■□□□ 1.37
SCARB1-210ENST00000545493 NEMFO60524 1076 aa23.62■■□□□ 1.37
SCARB1-210ENST00000545493 PHKA2P46019 1235 aa23.62■■□□□ 1.37
SCARB1-210ENST00000545493 NDUFV1P49821 464 aa23.62■■□□□ 1.37
SCARB1-210ENST00000545493 ERVFC1P60507 584 aa23.62■■□□□ 1.37
SCARB1-210ENST00000545493 ZP2Q05996 745 aa23.62■■□□□ 1.37
SCARB1-210ENST00000545493 CCDC83Q8IWF9 413 aa23.62■■□□□ 1.37
SCARB1-210ENST00000545493 EFHBQ8N7U6 833 aa23.62■■□□□ 1.37
SCARB1-210ENST00000545493 TMEM143Q96AN5 459 aa23.62■■□□□ 1.37
SCARB1-210ENST00000545493 MSLNLQ96KJ4 702 aa23.62■■□□□ 1.37
SCARB1-210ENST00000545493 KIF2CQ99661 725 aa23.62■■□□□ 1.37
SCARB1-210ENST00000545493 TRAIPQ9BWF2 469 aa23.62■■□□□ 1.37
SCARB1-210ENST00000545493 ZSWIM4Q9H7M6 989 aa23.62■■□□□ 1.37
SCARB1-210ENST00000545493 CHST12Q9NRB3 414 aa23.62■■□□□ 1.37
SCARB1-210ENST00000545493 CLEC1BQ9P126 229 aa23.62■■□□□ 1.37
SCARB1-210ENST00000545493 SLITRK3O94933 977 aa23.61■■□□□ 1.37
SCARB1-210ENST00000545493 BAG4O95429 457 aaKnown RBP23.61■■□□□ 1.37
SCARB1-210ENST00000545493 EOMESO95936 686 aa23.61■■□□□ 1.37
SCARB1-210ENST00000545493 COL9A1P20849 921 aa23.61■■□□□ 1.37
SCARB1-210ENST00000545493 RFC5P40937 340 aa23.61■■□□□ 1.37
SCARB1-210ENST00000545493 PLCB3Q01970 1234 aa23.61■■□□□ 1.37
SCARB1-210ENST00000545493 SMAD4Q13485 552 aaKnown RBP23.61■■□□□ 1.37
SCARB1-210ENST00000545493 TRIM29Q14134 588 aa23.61■■□□□ 1.37
SCARB1-210ENST00000545493 SMAD2Q15796 467 aaKnown RBP23.61■■□□□ 1.37
SCARB1-210ENST00000545493 KCNT2Q6UVM3 1135 aa23.61■■□□□ 1.37
SCARB1-210ENST00000545493 RBM23Q86U06 439 aaKnown RBP23.61■■□□□ 1.37
SCARB1-210ENST00000545493 PSPC1Q8WXF1 523 aaKnown RBP23.61■■□□□ 1.37
SCARB1-210ENST00000545493 EIF2AK1Q9BQI3 630 aaKnown RBP23.61■■□□□ 1.37
SCARB1-210ENST00000545493 C1QTNF1Q9BXJ1 281 aa23.61■■□□□ 1.37
SCARB1-210ENST00000545493 MINDY3Q9H8M7 445 aa23.61■■□□□ 1.37
SCARB1-210ENST00000545493 XPNPEP1Q9NQW7 623 aa23.61■■□□□ 1.37
SCARB1-210ENST00000545493 AGPAT5Q9NUQ2 364 aa23.61■■□□□ 1.37
SCARB1-210ENST00000545493 RAPGEFL1Q9UHV5 662 aa23.61■■□□□ 1.37
SCARB1-210ENST00000545493 MEIS3P2A8K0S8 358 aa23.6■■□□□ 1.37
SCARB1-210ENST00000545493 SSTR3P32745 418 aaPredicted RBP23.6■■□□□ 1.37
SCARB1-210ENST00000545493 GUCY1B3Q02153 619 aa23.6■■□□□ 1.37
SCARB1-210ENST00000545493 TWF2Q6IBS0 349 aaKnown RBP23.6■■□□□ 1.37
SCARB1-210ENST00000545493 CATSPER4Q7RTX7 472 aa23.6■■□□□ 1.37
SCARB1-210ENST00000545493 VN1R2Q8NFZ6 395 aa23.6■■□□□ 1.37
SCARB1-210ENST00000545493 MRPS27Q92552 414 aaKnown RBP23.6■■□□□ 1.37
SCARB1-210ENST00000545493 LPPQ93052 612 aa23.6■■□□□ 1.37
SCARB1-210ENST00000545493 ZNF558Q96NG5 402 aa23.6■■□□□ 1.37
SCARB1-210ENST00000545493 MTMR9Q96QG7 549 aa23.6■■□□□ 1.37
SCARB1-210ENST00000545493 INO80BQ9C086 356 aaPredicted RBP23.6■■□□□ 1.37
SCARB1-210ENST00000545493 TMEM60Q9H2L4 133 aa23.6■■□□□ 1.37
SCARB1-210ENST00000545493 C11orf16Q9NQ32 467 aa23.6■■□□□ 1.37
SCARB1-210ENST00000545493 CD207Q9UJ71 328 aa23.6■■□□□ 1.37
SCARB1-210ENST00000545493 BARX2Q9UMQ3 279 aaPredicted RBP23.6■■□□□ 1.37
SCARB1-210ENST00000545493 LIMCH1Q9UPQ0 1083 aa23.6■■□□□ 1.37
SCARB1-210ENST00000545493 FAM50BQ9Y247 325 aa23.6■■□□□ 1.37
SCARB1-210ENST00000545493 LZTS1Q9Y250 596 aa23.6■■□□□ 1.37
SCARB1-210ENST00000545493 RBM10P98175 930 aaKnown RBP23.59■■□□□ 1.37
SCARB1-210ENST00000545493 LAMTOR4Q0VGL1 99 aa23.59■■□□□ 1.37
SCARB1-210ENST00000545493 XKR9Q5GH70 373 aa23.59■■□□□ 1.37
SCARB1-210ENST00000545493 PLPP4Q5VZY2 271 aa23.59■■□□□ 1.37
SCARB1-210ENST00000545493 PRPF31Q8WWY3 499 aaKnown RBP23.59■■□□□ 1.37
SCARB1-210ENST00000545493 MTRQ99707 1265 aa23.59■■□□□ 1.37
SCARB1-210ENST00000545493 HSD17B14Q9BPX1 270 aa23.59■■□□□ 1.37
SCARB1-210ENST00000545493 MRPL9Q9BYD2 267 aaKnown RBP23.59■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms