RNA–Protein interactions for RNA: ENST00000545484.1

CCND1-206, Transcript of cyclin D1, humanhuman

TSL 5

Gene CCND1, Length 430 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1-206ENST00000545484 PLXNA4Q9HCM2 1894 aa24■■□□□ 1.43
CCND1-206ENST00000545484 TCF20Q9UGU0 1960 aaKnown RBP24■■□□□ 1.43
CCND1-206ENST00000545484 TECP42680 631 aa24■■□□□ 1.43
CCND1-206ENST00000545484 KCNQ1P51787 676 aa24■■□□□ 1.43
CCND1-206ENST00000545484 ECHDC2Q86YB7 292 aa24■■□□□ 1.43
CCND1-206ENST00000545484 TCP11Q8WWU5 503 aa24■■□□□ 1.43
CCND1-206ENST00000545484 PRPF31Q8WWY3 499 aaKnown RBP24■■□□□ 1.43
CCND1-206ENST00000545484 ALG13Q9NP73 1137 aaKnown RBP24■■□□□ 1.43
CCND1-206ENST00000545484 SRGAP2CP0DJJ0 459 aa23.99■■□□□ 1.43
CCND1-206ENST00000545484 U2AF2P26368 475 aaKnown RBP eCLIP23.99■■□□□ 1.43
CCND1-206ENST00000545484 TRAPPC10P48553 1259 aa23.99■■□□□ 1.43
CCND1-206ENST00000545484 MCM2P49736 904 aa23.99■■□□□ 1.43
CCND1-206ENST00000545484 LAMTOR4Q0VGL1 99 aa23.99■■□□□ 1.43
CCND1-206ENST00000545484 NBR1Q14596 966 aa23.99■■□□□ 1.43
CCND1-206ENST00000545484 CATSPER4Q7RTX7 472 aa23.99■■□□□ 1.43
CCND1-206ENST00000545484 P2RX5Q93086 422 aa23.99■■□□□ 1.43
CCND1-206ENST00000545484 LMAN2LQ9H0V9 348 aa23.99■■□□□ 1.43
CCND1-206ENST00000545484 NSUN3Q9H649 340 aaKnown RBP23.99■■□□□ 1.43
CCND1-206ENST00000545484 IFT122Q9HBG6 1241 aa23.99■■□□□ 1.43
CCND1-206ENST00000545484 ANKEF1Q9NU02 776 aa23.99■■□□□ 1.43
CCND1-206ENST00000545484 HCSTQ9UBK5 93 aa23.99■■□□□ 1.43
CCND1-206ENST00000545484 PLAGL2Q9UPG8 496 aa23.99■■□□□ 1.43
CCND1-206ENST00000545484 PIN4Q9Y237 131 aaKnown RBP23.99■■□□□ 1.43
CCND1-206ENST00000545484 CUL9Q8IWT3 2517 aa23.99■■□□□ 1.43
CCND1-206ENST00000545484 HOXA2O43364 376 aa23.98■■□□□ 1.43
CCND1-206ENST00000545484 TCEAL5Q5H9L2 206 aa23.98■■□□□ 1.43
CCND1-206ENST00000545484 TWF2Q6IBS0 349 aaKnown RBP23.98■■□□□ 1.43
CCND1-206ENST00000545484 FERMT3Q86UX7 667 aa23.98■■□□□ 1.43
CCND1-206ENST00000545484 ABI1Q8IZP0 508 aa23.98■■□□□ 1.43
CCND1-206ENST00000545484 KLHL23Q8NBE8 558 aa23.98■■□□□ 1.43
CCND1-206ENST00000545484 ADAMTS19Q8TE59 1207 aa23.98■■□□□ 1.43
CCND1-206ENST00000545484 PIGOQ8TEQ8 1089 aa23.98■■□□□ 1.43
CCND1-206ENST00000545484 CHST12Q9NRB3 414 aa23.98■■□□□ 1.43
CCND1-206ENST00000545484 XIRP2A4UGR9 3374 aa23.97■■□□□ 1.43
CCND1-206ENST00000545484 A0A087WWV3 80 aa23.97■■□□□ 1.43
CCND1-206ENST00000545484 A0A0U1RQF3 1178 aa23.97■■□□□ 1.43
CCND1-206ENST00000545484 ITGB1P05556 798 aa23.97■■□□□ 1.43
CCND1-206ENST00000545484 SPATA31C1P0DKV0 1188 aa23.97■■□□□ 1.43
CCND1-206ENST00000545484 GJB2P29033 226 aa23.97■■□□□ 1.43
CCND1-206ENST00000545484 RARRES1P49788 294 aa23.97■■□□□ 1.43
CCND1-206ENST00000545484 NAALADL2Q58DX5 795 aa23.97■■□□□ 1.43
CCND1-206ENST00000545484 MCTP1Q6DN14 999 aa23.97■■□□□ 1.43
CCND1-206ENST00000545484 RNF149Q8NC42 400 aa23.97■■□□□ 1.43
CCND1-206ENST00000545484 ERMNQ8TAM6 284 aa23.97■■□□□ 1.43
CCND1-206ENST00000545484 TMEM117Q9H0C3 514 aa23.97■■□□□ 1.43
CCND1-206ENST00000545484 UBE2ZQ9H832 354 aaPredicted RBP23.97■■□□□ 1.43
CCND1-206ENST00000545484 XPNPEP1Q9NQW7 623 aa23.97■■□□□ 1.43
CCND1-206ENST00000545484 BRWD1Q9NSI6 2320 aa23.97■■□□□ 1.43
CCND1-206ENST00000545484 RNF19AQ9NV58 838 aa23.97■■□□□ 1.43
CCND1-206ENST00000545484 TYW1Q9NV66 732 aaKnown RBP23.97■■□□□ 1.43
CCND1-206ENST00000545484 MYO7AQ13402 2215 aa23.96■■□□□ 1.43
CCND1-206ENST00000545484 DGAT1O75907 488 aa23.96■■□□□ 1.43
CCND1-206ENST00000545484 CATSPER3Q86XQ3 398 aa23.96■■□□□ 1.43
CCND1-206ENST00000545484 CASD1Q96PB1 797 aa23.96■■□□□ 1.43
CCND1-206ENST00000545484 TUFT1Q9NNX1 390 aa23.96■■□□□ 1.43
CCND1-206ENST00000545484 AAASQ9NRG9 546 aa23.96■■□□□ 1.43
CCND1-206ENST00000545484 PCDHB12Q9Y5F1 795 aa23.96■■□□□ 1.43
CCND1-206ENST00000545484 ASAP2O43150 1006 aa23.95■■□□□ 1.42
CCND1-206ENST00000545484 MED24O75448 989 aa23.95■■□□□ 1.42
CCND1-206ENST00000545484 ATF7P17544 494 aaPredicted RBP23.95■■□□□ 1.42
CCND1-206ENST00000545484 CLLU1OSQ5K130 101 aa23.95■■□□□ 1.42
CCND1-206ENST00000545484 SRGAP1Q7Z6B7 1085 aa23.95■■□□□ 1.42
CCND1-206ENST00000545484 ZNF598Q86UK7 904 aaKnown RBP23.95■■□□□ 1.42
CCND1-206ENST00000545484 LRRC43Q8N309 656 aa23.95■■□□□ 1.42
CCND1-206ENST00000545484 MINDY3Q9H8M7 445 aa23.95■■□□□ 1.42
CCND1-206ENST00000545484 H3BQV1 296 aa23.94■■□□□ 1.42
CCND1-206ENST00000545484 USO1O60763 962 aaKnown RBP23.94■■□□□ 1.42
CCND1-206ENST00000545484 EOMESO95936 686 aa23.94■■□□□ 1.42
CCND1-206ENST00000545484 BMP1P13497 986 aa23.94■■□□□ 1.42
CCND1-206ENST00000545484 KCNA5P22460 613 aa23.94■■□□□ 1.42
CCND1-206ENST00000545484 DNAJB1P25685 340 aa23.94■■□□□ 1.42
CCND1-206ENST00000545484 PHKA2P46019 1235 aa23.94■■□□□ 1.42
CCND1-206ENST00000545484 TOB1P50616 345 aaPredicted RBP23.94■■□□□ 1.42
CCND1-206ENST00000545484 MXD4Q14582 209 aaPredicted RBP23.94■■□□□ 1.42
CCND1-206ENST00000545484 POTEGQ6S5H5 508 aa23.94■■□□□ 1.42
CCND1-206ENST00000545484 EP400NLQ6ZTU2 488 aa23.94■■□□□ 1.42
CCND1-206ENST00000545484 THNSL1Q8IYQ7 743 aa23.94■■□□□ 1.42
CCND1-206ENST00000545484 COLGALT1Q8NBJ5 622 aa23.94■■□□□ 1.42
CCND1-206ENST00000545484 SPPL3Q8TCT6 385 aa23.94■■□□□ 1.42
CCND1-206ENST00000545484 POLR3CQ9BUI4 534 aaPredicted RBP23.94■■□□□ 1.42
CCND1-206ENST00000545484 AGPAT5Q9NUQ2 364 aa23.94■■□□□ 1.42
CCND1-206ENST00000545484 SMC3Q9UQE7 1217 aa23.94■■□□□ 1.42
CCND1-206ENST00000545484 PCDHB6Q9Y5E3 794 aa23.94■■□□□ 1.42
CCND1-206ENST00000545484 SPTBN5Q9NRC6 3674 aaKnown RBP23.94■■□□□ 1.42
CCND1-206ENST00000545484 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP23.93■■□□□ 1.42
CCND1-206ENST00000545484 XRCC6P12956 609 aaKnown RBP eCLIP23.93■■□□□ 1.42
CCND1-206ENST00000545484 LAG3P18627 525 aa23.93■■□□□ 1.42
CCND1-206ENST00000545484 CAMK1Q14012 370 aa23.93■■□□□ 1.42
CCND1-206ENST00000545484 HAUS3Q68CZ6 603 aa23.93■■□□□ 1.42
CCND1-206ENST00000545484 C4orf32Q8N8J7 132 aa23.93■■□□□ 1.42
CCND1-206ENST00000545484 HELQQ8TDG4 1101 aa23.93■■□□□ 1.42
CCND1-206ENST00000545484 POF1BQ8WVV4 589 aa23.93■■□□□ 1.42
CCND1-206ENST00000545484 UHRF1Q96T88 793 aaPredicted RBP23.93■■□□□ 1.42
CCND1-206ENST00000545484 TRAIPQ9BWF2 469 aa23.93■■□□□ 1.42
CCND1-206ENST00000545484 CWH43Q9H720 699 aa23.93■■□□□ 1.42
CCND1-206ENST00000545484 FAM105AQ9NUU6 356 aa23.93■■□□□ 1.42
CCND1-206ENST00000545484 ERLIN2O94905 339 aa23.92■■□□□ 1.42
CCND1-206ENST00000545484 SKIP12755 728 aa23.92■■□□□ 1.42
CCND1-206ENST00000545484 RPA1P27694 616 aa23.92■■□□□ 1.42
CCND1-206ENST00000545484 FXR2P51116 673 aaKnown RBP eCLIP23.92■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms