RNA–Protein interactions for RNA: ENST00000543185.5

HDAC4-215, Transcript of histone deacetylase 4, humanhuman

TSL 5 BASIC

Gene HDAC4, Length 8,990 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-215ENST00000543185 CCDC85BQ15834 202 aaPredicted RBP20.58■□□□□ 0.88
HDAC4-215ENST00000543185 ADNPQ9H2P0 1102 aa20.58■□□□□ 0.88
HDAC4-215ENST00000543185 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.58■□□□□ 0.884e-7■■■■■ 27.4
HDAC4-215ENST00000543185 GTSE1Q9NYZ3 720 aa20.58■□□□□ 0.88
HDAC4-215ENST00000543185 CLEC11AQ9Y240 323 aa20.58■□□□□ 0.88
HDAC4-215ENST00000543185 ANP32DO95626 131 aa20.58■□□□□ 0.88
HDAC4-215ENST00000543185 DSG1Q02413 1049 aa20.57■□□□□ 0.88
HDAC4-215ENST00000543185 ICA1Q05084 483 aa20.57■□□□□ 0.88
HDAC4-215ENST00000543185 ZNF280CQ8ND82 737 aa20.57■□□□□ 0.88
HDAC4-215ENST00000543185 SLC26A7Q8TE54 656 aa20.57■□□□□ 0.88
HDAC4-215ENST00000543185 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.57■□□□□ 0.88
HDAC4-215ENST00000543185 CDC42BPGQ6DT37 1551 aa20.57■□□□□ 0.88
HDAC4-215ENST00000543185 TFDP2Q14188 446 aa20.57■□□□□ 0.88
HDAC4-215ENST00000543185 FAM47EQ6ZV65 393 aa20.57■□□□□ 0.88
HDAC4-215ENST00000543185 EME1Q96AY2 570 aa20.57■□□□□ 0.88
HDAC4-215ENST00000543185 DMC1Q14565 340 aa20.57■□□□□ 0.88
HDAC4-215ENST00000543185 PSMA3P25788 255 aa20.57■□□□□ 0.88
HDAC4-215ENST00000543185 CERKLQ49MI3 558 aaPredicted RBP20.57■□□□□ 0.88
HDAC4-215ENST00000543185 SGSM3Q96HU1 749 aa20.57■□□□□ 0.88
HDAC4-215ENST00000543185 ASNSD1Q9NWL6 643 aa20.57■□□□□ 0.88
HDAC4-215ENST00000543185 WDR3Q9UNX4 943 aaKnown RBP eCLIP20.57■□□□□ 0.88
HDAC4-215ENST00000543185 USP15Q9Y4E8 981 aaPredicted RBP20.57■□□□□ 0.88
HDAC4-215ENST00000543185 LDHAP00338 332 aaKnown RBP20.56■□□□□ 0.88
HDAC4-215ENST00000543185 SLC9A1P19634 815 aa20.56■□□□□ 0.88
HDAC4-215ENST00000543185 SOX6P35712 828 aa20.56■□□□□ 0.88
HDAC4-215ENST00000543185 IQCA1LA6NCM1 817 aa20.56■□□□□ 0.88
HDAC4-215ENST00000543185 PLCG1P19174 1290 aa20.56■□□□□ 0.88
HDAC4-215ENST00000543185 IL13P35225 146 aa20.56■□□□□ 0.88
HDAC4-215ENST00000543185 CEP78Q5JTW2 689 aa20.56■□□□□ 0.88
HDAC4-215ENST00000543185 PTH1RQ03431 593 aa20.56■□□□□ 0.88
HDAC4-215ENST00000543185 GOLGA8FQ08AF8 430 aa20.56■□□□□ 0.88
HDAC4-215ENST00000543185 GOLGA8DPQ0D2H9 430 aa20.56■□□□□ 0.88
HDAC4-215ENST00000543185 SPATA21Q7Z572 469 aa20.56■□□□□ 0.88
HDAC4-215ENST00000543185 MB21D1Q8N884 522 aa20.56■□□□□ 0.88
HDAC4-215ENST00000543185 ANTXR1Q9H6X2 564 aa20.56■□□□□ 0.88
HDAC4-215ENST00000543185 WBP4O75554 376 aaKnown RBP20.56■□□□□ 0.88
HDAC4-215ENST00000543185 ADD1P35611 737 aaKnown RBP20.56■□□□□ 0.88
HDAC4-215ENST00000543185 GPC5P78333 572 aa20.56■□□□□ 0.88
HDAC4-215ENST00000543185 HIF1AQ16665 826 aa20.56■□□□□ 0.88
HDAC4-215ENST00000543185 RIBC1Q8N443 379 aaPredicted RBP20.56■□□□□ 0.88
HDAC4-215ENST00000543185 RSPH1Q8WYR4 309 aa20.56■□□□□ 0.88
HDAC4-215ENST00000543185 ZNF556Q9HAH1 456 aa20.56■□□□□ 0.88
HDAC4-215ENST00000543185 KIAA1755Q5JYT7 1200 aa20.56■□□□□ 0.88
HDAC4-215ENST00000543185 RAPGEF5Q92565 580 aa20.56■□□□□ 0.88
HDAC4-215ENST00000543185 TSPOAP1O95153 1857 aa20.56■□□□□ 0.88
HDAC4-215ENST00000543185 ABL1P00519 1130 aa20.56■□□□□ 0.88
HDAC4-215ENST00000543185 LAMB3Q13751 1172 aa20.56■□□□□ 0.88
HDAC4-215ENST00000543185 STK36Q9NRP7 1315 aa20.56■□□□□ 0.88
HDAC4-215ENST00000543185 TOMM70O94826 608 aa20.56■□□□□ 0.88
HDAC4-215ENST00000543185 NSUN7Q8NE18 718 aaKnown RBP20.56■□□□□ 0.88
HDAC4-215ENST00000543185 DDI1Q8WTU0 396 aa20.56■□□□□ 0.88
HDAC4-215ENST00000543185 SYNJ2BP-COX16A0A087WUM0 186 aa20.55■□□□□ 0.88
HDAC4-215ENST00000543185 TOM1O60784 492 aa20.55■□□□□ 0.88
HDAC4-215ENST00000543185 CSTF3Q12996 717 aaKnown RBP20.55■□□□□ 0.88
HDAC4-215ENST00000543185 COX16Q9P0S2 106 aa20.55■□□□□ 0.88
HDAC4-215ENST00000543185 PITPNM2Q9BZ72 1349 aa20.55■□□□□ 0.88
HDAC4-215ENST00000543185 PLEKHG1Q9ULL1 1385 aa20.55■□□□□ 0.88
HDAC4-215ENST00000543185 USP17L12C9JPN9 530 aa20.55■□□□□ 0.88
HDAC4-215ENST00000543185 USP17L21D6R901 530 aa20.55■□□□□ 0.88
HDAC4-215ENST00000543185 LIFRP42702 1097 aa20.55■□□□□ 0.88
HDAC4-215ENST00000543185 CAB39Q9Y376 341 aaPredicted RBP20.55■□□□□ 0.88
HDAC4-215ENST00000543185 RFX7Q2KHR2 1363 aa20.55■□□□□ 0.88
HDAC4-215ENST00000543185 PJA2O43164 708 aa20.55■□□□□ 0.88
HDAC4-215ENST00000543185 CDH16O75309 829 aa20.55■□□□□ 0.88
HDAC4-215ENST00000543185 CHRNA2Q15822 529 aa20.55■□□□□ 0.88
HDAC4-215ENST00000543185 ZMYM1Q5SVZ6 1142 aa20.55■□□□□ 0.88
HDAC4-215ENST00000543185 TFCP2L1Q9NZI6 479 aa20.55■□□□□ 0.88
HDAC4-215ENST00000543185 RNF139Q8WU17 664 aa20.55■□□□□ 0.88
HDAC4-215ENST00000543185 SCFD1Q8WVM8 642 aa20.55■□□□□ 0.88
HDAC4-215ENST00000543185 ANAPC7Q9UJX3 599 aa20.55■□□□□ 0.88
HDAC4-215ENST00000543185 ATP7BP35670 1465 aa20.55■□□□□ 0.88
HDAC4-215ENST00000543185 M0R3G1 203 aa20.55■□□□□ 0.88
HDAC4-215ENST00000543185 KRT14P02533 472 aa20.55■□□□□ 0.88
HDAC4-215ENST00000543185 CCND2P30279 289 aa20.55■□□□□ 0.88
HDAC4-215ENST00000543185 PRPF18Q99633 342 aaKnown RBP20.55■□□□□ 0.88
HDAC4-215ENST00000543185 TAGAPQ8N103 731 aa20.55■□□□□ 0.88
HDAC4-215ENST00000543185 PCYOX1LQ8NBM8 494 aa20.55■□□□□ 0.88
HDAC4-215ENST00000543185 CYTH1Q15438 398 aa20.54■□□□□ 0.88
HDAC4-215ENST00000543185 DNAJC9Q8WXX5 260 aa20.54■□□□□ 0.88
HDAC4-215ENST00000543185 SUGCTQ9HAC7 445 aa20.54■□□□□ 0.88
HDAC4-215ENST00000543185 TFAMQ00059 246 aaKnown RBP20.54■□□□□ 0.88
HDAC4-215ENST00000543185 ENOSF1Q7L5Y1 443 aa20.54■□□□□ 0.88
HDAC4-215ENST00000543185 EMILIN3Q9NT22 766 aa20.54■□□□□ 0.88
HDAC4-215ENST00000543185 LMCD1Q9NZU5 365 aa20.54■□□□□ 0.88
HDAC4-215ENST00000543185 ERVV-2B6SEH9 535 aa20.54■□□□□ 0.88
HDAC4-215ENST00000543185 KLHL2O95198 593 aa20.54■□□□□ 0.88
HDAC4-215ENST00000543185 NUP107P57740 925 aa20.54■□□□□ 0.88
HDAC4-215ENST00000543185 KRT72Q14CN4 511 aa20.54■□□□□ 0.88
HDAC4-215ENST00000543185 LRRC8EQ6NSJ5 796 aa20.54■□□□□ 0.88
HDAC4-215ENST00000543185 RMDN1Q96DB5 314 aa20.54■□□□□ 0.88
HDAC4-215ENST00000543185 DCTN4Q9UJW0 460 aa20.54■□□□□ 0.88
HDAC4-215ENST00000543185 CSADQ9Y600 493 aa20.54■□□□□ 0.88
HDAC4-215ENST00000543185 USP14P54578 494 aa20.54■□□□□ 0.88
HDAC4-215ENST00000543185 CENPPQ6IPU0 288 aa20.54■□□□□ 0.88
HDAC4-215ENST00000543185 ARHGEF1Q92888 912 aaKnown RBP20.54■□□□□ 0.88
HDAC4-215ENST00000543185 MAP3K19Q56UN5 1328 aa20.54■□□□□ 0.88
HDAC4-215ENST00000543185 APOA4P06727 396 aa20.54■□□□□ 0.88
HDAC4-215ENST00000543185 BRAFP15056 766 aa20.54■□□□□ 0.88
HDAC4-215ENST00000543185 MARK3P27448 753 aa20.54■□□□□ 0.88
HDAC4-215ENST00000543185 ST13P50502 369 aaKnown RBP20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms