RNA–Protein interactions for RNA: ENST00000543120.5

PTPN6-221, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 4

Gene PTPN6, Length 564 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-221ENST00000543120 EMC2Q15006 297 aa18.54■□□□□ 0.56
PTPN6-221ENST00000543120 ZNF598Q86UK7 904 aaKnown RBP18.54■□□□□ 0.56
PTPN6-221ENST00000543120 ADAMTS19Q8TE59 1207 aa18.54■□□□□ 0.56
PTPN6-221ENST00000543120 PIGOQ8TEQ8 1089 aa18.54■□□□□ 0.56
PTPN6-221ENST00000543120 NECAB3Q96P71 396 aaPredicted RBP18.54■□□□□ 0.56
PTPN6-221ENST00000543120 CWH43Q9H720 699 aa18.54■□□□□ 0.56
PTPN6-221ENST00000543120 PPME1Q9Y570 386 aa18.54■□□□□ 0.56
PTPN6-221ENST00000543120 COL4A3BPQ9Y5P4 624 aa18.54■□□□□ 0.56
PTPN6-221ENST00000543120 LOXHD1Q8IVV2 1947 aa18.53■□□□□ 0.56
PTPN6-221ENST00000543120 MED24O75448 989 aa18.53■□□□□ 0.56
PTPN6-221ENST00000543120 ATF7P17544 494 aaPredicted RBP18.53■□□□□ 0.56
PTPN6-221ENST00000543120 CLLU1OSQ5K130 101 aa18.53■□□□□ 0.56
PTPN6-221ENST00000543120 TTC38Q5R3I4 469 aa18.53■□□□□ 0.56
PTPN6-221ENST00000543120 CATSPER3Q86XQ3 398 aa18.53■□□□□ 0.56
PTPN6-221ENST00000543120 RNF169Q8NCN4 708 aa18.53■□□□□ 0.56
PTPN6-221ENST00000543120 P2RX5Q93086 422 aa18.53■□□□□ 0.56
PTPN6-221ENST00000543120 UPF2Q9HAU5 1272 aaKnown RBP18.53■□□□□ 0.56
PTPN6-221ENST00000543120 CHST12Q9NRB3 414 aa18.53■□□□□ 0.56
PTPN6-221ENST00000543120 ANKEF1Q9NU02 776 aa18.53■□□□□ 0.56
PTPN6-221ENST00000543120 WDR81Q562E7 1941 aa18.53■□□□□ 0.56
PTPN6-221ENST00000543120 OR52Z1P0C646 297 aa18.52■□□□□ 0.56
PTPN6-221ENST00000543120 NAALADL2Q58DX5 795 aa18.52■□□□□ 0.56
PTPN6-221ENST00000543120 FERMT3Q86UX7 667 aa18.52■□□□□ 0.56
PTPN6-221ENST00000543120 EXOC8Q8IYI6 725 aa18.52■□□□□ 0.56
PTPN6-221ENST00000543120 NEK9Q8TD19 979 aa18.52■□□□□ 0.56
PTPN6-221ENST00000543120 PSPC1Q8WXF1 523 aaKnown RBP18.52■□□□□ 0.56
PTPN6-221ENST00000543120 NSUN3Q9H649 340 aaKnown RBP18.52■□□□□ 0.56
PTPN6-221ENST00000543120 UBE2ZQ9H832 354 aaPredicted RBP18.52■□□□□ 0.56
PTPN6-221ENST00000543120 RNF216Q9NWF9 866 aaPredicted RBP18.52■□□□□ 0.56
PTPN6-221ENST00000543120 SFPQP23246 707 aaKnown RBP eCLIP18.51■□□□□ 0.55
PTPN6-221ENST00000543120 HOXA11P31270 313 aaPredicted RBP18.51■□□□□ 0.55
PTPN6-221ENST00000543120 GTF2F1P35269 517 aaKnown RBP eCLIP18.51■□□□□ 0.55
PTPN6-221ENST00000543120 IRS1P35568 1242 aa18.51■□□□□ 0.55
PTPN6-221ENST00000543120 PHKA2P46019 1235 aa18.51■□□□□ 0.55
PTPN6-221ENST00000543120 RARRES1P49788 294 aa18.51■□□□□ 0.55
PTPN6-221ENST00000543120 GNL2Q13823 731 aaKnown RBP18.51■□□□□ 0.55
PTPN6-221ENST00000543120 AAK1Q2M2I8 961 aa18.51■□□□□ 0.55
PTPN6-221ENST00000543120 LONRF3Q496Y0 759 aa18.51■□□□□ 0.55
PTPN6-221ENST00000543120 TIGD5Q53EQ6 642 aa18.51■□□□□ 0.55
PTPN6-221ENST00000543120 SPOUT1Q5T280 376 aaKnown RBP18.51■□□□□ 0.55
PTPN6-221ENST00000543120 CATSPER4Q7RTX7 472 aa18.51■□□□□ 0.55
PTPN6-221ENST00000543120 ASAP3Q8TDY4 903 aa18.51■□□□□ 0.55
PTPN6-221ENST00000543120 POF1BQ8WVV4 589 aa18.51■□□□□ 0.55
PTPN6-221ENST00000543120 MTRQ99707 1265 aa18.51■□□□□ 0.55
PTPN6-221ENST00000543120 INO80BQ9C086 356 aaPredicted RBP18.51■□□□□ 0.55
PTPN6-221ENST00000543120 TMEM117Q9H0C3 514 aa18.51■□□□□ 0.55
PTPN6-221ENST00000543120 LMAN2LQ9H0V9 348 aa18.51■□□□□ 0.55
PTPN6-221ENST00000543120 PCDHB6Q9Y5E3 794 aa18.51■□□□□ 0.55
PTPN6-221ENST00000543120 PCDHGC5Q9Y5F6 944 aa18.51■□□□□ 0.55
PTPN6-221ENST00000543120 MEIS3P2A8K0S8 358 aa18.5■□□□□ 0.55
PTPN6-221ENST00000543120 EOMESO95936 686 aa18.5■□□□□ 0.55
PTPN6-221ENST00000543120 XRCC6P12956 609 aaKnown RBP eCLIP18.5■□□□□ 0.55
PTPN6-221ENST00000543120 KCNA5P22460 613 aa18.5■□□□□ 0.55
PTPN6-221ENST00000543120 ARL2P36404 184 aa18.5■□□□□ 0.55
PTPN6-221ENST00000543120 TRAPPC10P48553 1259 aa18.5■□□□□ 0.55
PTPN6-221ENST00000543120 HYAL1Q12794 435 aa18.5■□□□□ 0.55
PTPN6-221ENST00000543120 COL19A1Q14993 1142 aa18.5■□□□□ 0.55
PTPN6-221ENST00000543120 ECM1Q16610 540 aa18.5■□□□□ 0.55
PTPN6-221ENST00000543120 COLGALT1Q8NBJ5 622 aa18.5■□□□□ 0.55
PTPN6-221ENST00000543120 RNF149Q8NC42 400 aa18.5■□□□□ 0.55
PTPN6-221ENST00000543120 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.5■□□□□ 0.55
PTPN6-221ENST00000543120 HELQQ8TDG4 1101 aa18.5■□□□□ 0.55
PTPN6-221ENST00000543120 TCP11Q8WWU5 503 aa18.5■□□□□ 0.55
PTPN6-221ENST00000543120 LPPQ93052 612 aa18.5■□□□□ 0.55
PTPN6-221ENST00000543120 UHRF1Q96T88 793 aaPredicted RBP18.5■□□□□ 0.55
PTPN6-221ENST00000543120 POLR3CQ9BUI4 534 aaPredicted RBP18.5■□□□□ 0.55
PTPN6-221ENST00000543120 TRAIPQ9BWF2 469 aa18.5■□□□□ 0.55
PTPN6-221ENST00000543120 DACT1Q9NYF0 836 aa18.5■□□□□ 0.55
PTPN6-221ENST00000543120 PIN4Q9Y237 131 aaKnown RBP18.5■□□□□ 0.55
PTPN6-221ENST00000543120 MUC3AQ02505 3323 aa18.49■□□□□ 0.55
PTPN6-221ENST00000543120 ASAP2O43150 1006 aa18.49■□□□□ 0.55
PTPN6-221ENST00000543120 GAS2O43903 313 aaKnown RBP18.49■□□□□ 0.55
PTPN6-221ENST00000543120 GJB2P29033 226 aa18.49■□□□□ 0.55
PTPN6-221ENST00000543120 LTBRP36941 435 aa18.49■□□□□ 0.55
PTPN6-221ENST00000543120 PBX3P40426 434 aa18.49■□□□□ 0.55
PTPN6-221ENST00000543120 ORC2Q13416 577 aaPredicted RBP18.49■□□□□ 0.55
PTPN6-221ENST00000543120 IL17AQ16552 155 aa18.49■□□□□ 0.55
PTPN6-221ENST00000543120 TWF2Q6IBS0 349 aaKnown RBP18.49■□□□□ 0.55
PTPN6-221ENST00000543120 SRGAP1Q7Z6B7 1085 aa18.49■□□□□ 0.55
PTPN6-221ENST00000543120 TUFT1Q9NNX1 390 aa18.49■□□□□ 0.55
PTPN6-221ENST00000543120 PCDHB12Q9Y5F1 795 aa18.49■□□□□ 0.55
PTPN6-221ENST00000543120 H3BQ06 376 aaPredicted RBP18.48■□□□□ 0.55
PTPN6-221ENST00000543120 DGAT1O75907 488 aa18.48■□□□□ 0.55
PTPN6-221ENST00000543120 FGF18O76093 207 aa18.48■□□□□ 0.55
PTPN6-221ENST00000543120 GLRA2P23416 452 aa18.48■□□□□ 0.55
PTPN6-221ENST00000543120 RPA1P27694 616 aa18.48■□□□□ 0.55
PTPN6-221ENST00000543120 PTENP60484 403 aa18.48■□□□□ 0.55
PTPN6-221ENST00000543120 PTGDRQ13258 359 aa18.48■□□□□ 0.55
PTPN6-221ENST00000543120 LEXMQ3ZCV2 418 aa18.48■□□□□ 0.55
PTPN6-221ENST00000543120 UBXN11Q5T124 520 aa18.48■□□□□ 0.55
PTPN6-221ENST00000543120 POTEGQ6S5H5 508 aa18.48■□□□□ 0.55
PTPN6-221ENST00000543120 MAEAQ7L5Y9 396 aa18.48■□□□□ 0.55
PTPN6-221ENST00000543120 ADGRD2Q7Z7M1 963 aa18.48■□□□□ 0.55
PTPN6-221ENST00000543120 IL27Q8NEV9 243 aa18.48■□□□□ 0.55
PTPN6-221ENST00000543120 PABPC5Q96DU9 382 aaKnown RBP18.48■□□□□ 0.55
PTPN6-221ENST00000543120 IGFLR1Q9H665 355 aa18.48■□□□□ 0.55
PTPN6-221ENST00000543120 GPRC5CQ9NQ84 441 aa18.48■□□□□ 0.55
PTPN6-221ENST00000543120 AAASQ9NRG9 546 aa18.48■□□□□ 0.55
PTPN6-221ENST00000543120 AGPAT5Q9NUQ2 364 aa18.48■□□□□ 0.55
PTPN6-221ENST00000543120 FAM105AQ9NUU6 356 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms