RNA–Protein interactions for RNA: ENST00000543115.5

PTPN6-220, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 4

Gene PTPN6, Length 650 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-220ENST00000543115 ORC3Q9UBD5 711 aaPredicted RBP13.54□□□□□ -0.24
PTPN6-220ENST00000543115 WDR81Q562E7 1941 aa13.54□□□□□ -0.24
PTPN6-220ENST00000543115 FSCN2O14926 492 aa13.53□□□□□ -0.24
PTPN6-220ENST00000543115 HOXA2O43364 376 aa13.53□□□□□ -0.24
PTPN6-220ENST00000543115 EYA4O95677 639 aa13.53□□□□□ -0.24
PTPN6-220ENST00000543115 QARSP47897 775 aaKnown RBP13.53□□□□□ -0.24
PTPN6-220ENST00000543115 PLCB3Q01970 1234 aa13.53□□□□□ -0.24
PTPN6-220ENST00000543115 KCNT2Q6UVM3 1135 aa13.53□□□□□ -0.24
PTPN6-220ENST00000543115 RHPN2Q8IUC4 686 aa13.53□□□□□ -0.24
PTPN6-220ENST00000543115 LRRC43Q8N309 656 aa13.53□□□□□ -0.24
PTPN6-220ENST00000543115 SMRP1Q8NCR6 262 aa13.53□□□□□ -0.24
PTPN6-220ENST00000543115 HELQQ8TDG4 1101 aa13.53□□□□□ -0.24
PTPN6-220ENST00000543115 MRPS27Q92552 414 aaKnown RBP13.53□□□□□ -0.24
PTPN6-220ENST00000543115 TNFRSF25Q93038 417 aa13.53□□□□□ -0.24
PTPN6-220ENST00000543115 FAM20AQ96MK3 541 aa13.53□□□□□ -0.24
PTPN6-220ENST00000543115 CYP26B1Q9NR63 512 aa13.53□□□□□ -0.24
PTPN6-220ENST00000543115 SUCLA2Q9P2R7 463 aaPredicted RBP13.53□□□□□ -0.24
PTPN6-220ENST00000543115 DCXO43602 365 aa13.52□□□□□ -0.25
PTPN6-220ENST00000543115 GCFC2P16383 781 aaKnown RBP13.52□□□□□ -0.25
PTPN6-220ENST00000543115 XBP1P17861 261 aa13.52□□□□□ -0.25
PTPN6-220ENST00000543115 DNM2P50570 870 aa13.52□□□□□ -0.25
PTPN6-220ENST00000543115 SPIRE1Q08AE8 756 aa13.52□□□□□ -0.25
PTPN6-220ENST00000543115 COASYQ13057 564 aa13.52□□□□□ -0.25
PTPN6-220ENST00000543115 DUSP6Q16828 381 aa13.52□□□□□ -0.25
PTPN6-220ENST00000543115 CSPP1Q1MSJ5 1256 aa13.52□□□□□ -0.25
PTPN6-220ENST00000543115 PLPP4Q5VZY2 271 aa13.52□□□□□ -0.25
PTPN6-220ENST00000543115 ZNF410Q86VK4 478 aa13.52□□□□□ -0.25
PTPN6-220ENST00000543115 ABI1Q8IZP0 508 aa13.52□□□□□ -0.25
PTPN6-220ENST00000543115 NLRP4Q96MN2 994 aa13.52□□□□□ -0.25
PTPN6-220ENST00000543115 ZNF558Q96NG5 402 aa13.52□□□□□ -0.25
PTPN6-220ENST00000543115 IFT122Q9HBG6 1241 aa13.52□□□□□ -0.25
PTPN6-220ENST00000543115 BMP2KQ9NSY1 1161 aaPredicted RBP13.52□□□□□ -0.25
PTPN6-220ENST00000543115 DACT1Q9NYF0 836 aa13.52□□□□□ -0.25
PTPN6-220ENST00000543115 RGL1Q9NZL6 768 aa13.52□□□□□ -0.25
PTPN6-220ENST00000543115 LZTS1Q9Y250 596 aa13.52□□□□□ -0.25
PTPN6-220ENST00000543115 MYO7AQ13402 2215 aa13.52□□□□□ -0.25
PTPN6-220ENST00000543115 MEIS3P2A8K0S8 358 aa13.51□□□□□ -0.25
PTPN6-220ENST00000543115 HIDE1A8MVS5 230 aa13.51□□□□□ -0.25
PTPN6-220ENST00000543115 WNT7AO00755 349 aa13.51□□□□□ -0.25
PTPN6-220ENST00000543115 ZBTB39O15060 712 aa13.51□□□□□ -0.25
PTPN6-220ENST00000543115 TBX3O15119 743 aa13.51□□□□□ -0.25
PTPN6-220ENST00000543115 EOMESO95936 686 aa13.51□□□□□ -0.25
PTPN6-220ENST00000543115 P4HBP07237 508 aaKnown RBP13.51□□□□□ -0.25
PTPN6-220ENST00000543115 ALADP13716 330 aa13.51□□□□□ -0.25
PTPN6-220ENST00000543115 KRT2P35908 639 aa13.51□□□□□ -0.25
PTPN6-220ENST00000543115 PHKA2P46019 1235 aa13.51□□□□□ -0.25
PTPN6-220ENST00000543115 CDC42EP1Q00587 391 aa13.51□□□□□ -0.25
PTPN6-220ENST00000543115 ST3GAL1Q11201 340 aa13.51□□□□□ -0.25
PTPN6-220ENST00000543115 KCNC3Q14003 757 aa13.51□□□□□ -0.25
PTPN6-220ENST00000543115 ANKRD1Q15327 319 aa13.51□□□□□ -0.25
PTPN6-220ENST00000543115 LONRF3Q496Y0 759 aa13.51□□□□□ -0.25
PTPN6-220ENST00000543115 NCAPH2Q6IBW4 605 aa13.51□□□□□ -0.25
PTPN6-220ENST00000543115 NSUN7Q8NE18 718 aaKnown RBP13.51□□□□□ -0.25
PTPN6-220ENST00000543115 LPPQ93052 612 aa13.51□□□□□ -0.25
PTPN6-220ENST00000543115 GTF3C6Q969F1 213 aa13.51□□□□□ -0.25
PTPN6-220ENST00000543115 CEP170P1Q96L14 293 aa13.51□□□□□ -0.25
PTPN6-220ENST00000543115 TCF25Q9BQ70 676 aa13.51□□□□□ -0.25
PTPN6-220ENST00000543115 LXNQ9BS40 222 aa13.51□□□□□ -0.25
PTPN6-220ENST00000543115 TRAIPQ9BWF2 469 aa13.51□□□□□ -0.25
PTPN6-220ENST00000543115 DHX33Q9H6R0 707 aaKnown RBP13.51□□□□□ -0.25
PTPN6-220ENST00000543115 CHST12Q9NRB3 414 aa13.51□□□□□ -0.25
PTPN6-220ENST00000543115 PIN4Q9Y237 131 aaKnown RBP13.51□□□□□ -0.25
PTPN6-220ENST00000543115 USP15Q9Y4E8 981 aaPredicted RBP13.51□□□□□ -0.25
PTPN6-220ENST00000543115 PRR33A8MZF0 331 aa13.5□□□□□ -0.25
PTPN6-220ENST00000543115 NT5C1B-RDH14C9J2C7 533 aa13.5□□□□□ -0.25
PTPN6-220ENST00000543115 JAK2O60674 1132 aa13.5□□□□□ -0.25
PTPN6-220ENST00000543115 SEC24BO95487 1268 aa13.5□□□□□ -0.25
PTPN6-220ENST00000543115 SFPQP23246 707 aaKnown RBP eCLIP13.5□□□□□ -0.25
PTPN6-220ENST00000543115 PLA2G5P39877 138 aa13.5□□□□□ -0.25
PTPN6-220ENST00000543115 FOSBP53539 338 aa13.5□□□□□ -0.25
PTPN6-220ENST00000543115 CTTNQ14247 550 aaKnown RBP13.5□□□□□ -0.25
PTPN6-220ENST00000543115 EPHA7Q15375 998 aa13.5□□□□□ -0.25
PTPN6-220ENST00000543115 TWF2Q6IBS0 349 aaKnown RBP13.5□□□□□ -0.25
PTPN6-220ENST00000543115 PDE12Q6L8Q7 609 aaKnown RBP13.5□□□□□ -0.25
PTPN6-220ENST00000543115 C4orf19Q8IY42 314 aa13.5□□□□□ -0.25
PTPN6-220ENST00000543115 SLC39A11Q8N1S5 342 aa13.5□□□□□ -0.25
PTPN6-220ENST00000543115 WASF1Q92558 559 aa13.5□□□□□ -0.25
PTPN6-220ENST00000543115 TMEM143Q96AN5 459 aa13.5□□□□□ -0.25
PTPN6-220ENST00000543115 DYDC2Q96IM9 177 aa13.5□□□□□ -0.25
PTPN6-220ENST00000543115 POP1Q99575 1024 aaKnown RBP13.5□□□□□ -0.25
PTPN6-220ENST00000543115 MINDY3Q9H8M7 445 aa13.5□□□□□ -0.25
PTPN6-220ENST00000543115 ENTPD7Q9NQZ7 604 aa13.5□□□□□ -0.25
PTPN6-220ENST00000543115 FAM105AQ9NUU6 356 aa13.5□□□□□ -0.25
PTPN6-220ENST00000543115 SPG21Q9NZD8 308 aa13.5□□□□□ -0.25
PTPN6-220ENST00000543115 MUTYHQ9UIF7 546 aa13.5□□□□□ -0.25
PTPN6-220ENST00000543115 COL4A3BPQ9Y5P4 624 aa13.5□□□□□ -0.25
PTPN6-220ENST00000543115 BTBD18B2RXH4 712 aa13.49□□□□□ -0.25
PTPN6-220ENST00000543115 MARCH6O60337 910 aa13.49□□□□□ -0.25
PTPN6-220ENST00000543115 DKC1O60832 514 aaKnown RBP eCLIP13.49□□□□□ -0.25
PTPN6-220ENST00000543115 YWHABP31946 246 aaKnown RBP13.49□□□□□ -0.25
PTPN6-220ENST00000543115 PPM1AP35813 382 aa13.49□□□□□ -0.25
PTPN6-220ENST00000543115 POLGP54098 1239 aaPredicted RBP13.49□□□□□ -0.25
PTPN6-220ENST00000543115 BCAR1P56945 870 aa13.49□□□□□ -0.25
PTPN6-220ENST00000543115 CYP4A11Q02928 519 aa13.49□□□□□ -0.25
PTPN6-220ENST00000543115 CATSPER4Q7RTX7 472 aa13.49□□□□□ -0.25
PTPN6-220ENST00000543115 TMEM173Q86WV6 379 aaPredicted RBP13.49□□□□□ -0.25
PTPN6-220ENST00000543115 RNF135Q8IUD6 432 aa13.49□□□□□ -0.25
PTPN6-220ENST00000543115 PRPF31Q8WWY3 499 aaKnown RBP13.49□□□□□ -0.25
PTPN6-220ENST00000543115 SLC7A3Q8WY07 619 aa13.49□□□□□ -0.25
PTPN6-220ENST00000543115 CDCA3Q99618 268 aaPredicted RBP13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms