RNA–Protein interactions for RNA: ENST00000542552.1

ECHDC2-223, Transcript of enoyl-CoA hydratase domain containing 2, humanhuman

TSL 1 (best)

Gene ECHDC2, Length 981 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC2-223ENST00000542552 DTHD1Q6ZMT9 781 aa17.21■□□□□ 0.35
ECHDC2-223ENST00000542552 BRAPQ7Z569 592 aa17.21■□□□□ 0.35
ECHDC2-223ENST00000542552 TMEM192Q8IY95 271 aa17.21■□□□□ 0.35
ECHDC2-223ENST00000542552 CMTR2Q8IYT2 770 aaKnown RBP17.21■□□□□ 0.35
ECHDC2-223ENST00000542552 FBXO22Q8NEZ5 403 aa17.21■□□□□ 0.35
ECHDC2-223ENST00000542552 GDPD5Q8WTR4 605 aa17.21■□□□□ 0.35
ECHDC2-223ENST00000542552 NLRP4Q96MN2 994 aa17.21■□□□□ 0.35
ECHDC2-223ENST00000542552 ATP6V0A4Q9HBG4 840 aa17.21■□□□□ 0.35
ECHDC2-223ENST00000542552 CHST12Q9NRB3 414 aa17.21■□□□□ 0.35
ECHDC2-223ENST00000542552 BMP2KQ9NSY1 1161 aaPredicted RBP17.21■□□□□ 0.35
ECHDC2-223ENST00000542552 TMEM161AQ9NX61 479 aa17.21■□□□□ 0.35
ECHDC2-223ENST00000542552 LMCD1Q9NZU5 365 aa17.21■□□□□ 0.35
ECHDC2-223ENST00000542552 PCDHB7Q9Y5E2 793 aa17.21■□□□□ 0.35
ECHDC2-223ENST00000542552 STK24Q9Y6E0 443 aa17.21■□□□□ 0.35
ECHDC2-223ENST00000542552 KIAA1671Q9BY89 1806 aa17.2■□□□□ 0.34
ECHDC2-223ENST00000542552 C5orf67F2Z3F1 127 aa17.2■□□□□ 0.34
ECHDC2-223ENST00000542552 SRGAP2CP0DJJ0 459 aa17.2■□□□□ 0.34
ECHDC2-223ENST00000542552 ZSCAN20P17040 1043 aaPredicted RBP17.2■□□□□ 0.34
ECHDC2-223ENST00000542552 SFPQP23246 707 aaKnown RBP eCLIP17.2■□□□□ 0.34
ECHDC2-223ENST00000542552 POU5F1BQ06416 359 aa17.2■□□□□ 0.34
ECHDC2-223ENST00000542552 BTG3Q14201 252 aaPredicted RBP17.2■□□□□ 0.34
ECHDC2-223ENST00000542552 MXD4Q14582 209 aaPredicted RBP17.2■□□□□ 0.34
ECHDC2-223ENST00000542552 SRGAP1Q7Z6B7 1085 aa17.2■□□□□ 0.34
ECHDC2-223ENST00000542552 TRAIPQ9BWF2 469 aa17.2■□□□□ 0.34
ECHDC2-223ENST00000542552 RAB34Q9BZG1 259 aa17.2■□□□□ 0.34
ECHDC2-223ENST00000542552 MINDY3Q9H8M7 445 aa17.2■□□□□ 0.34
ECHDC2-223ENST00000542552 LRFN2Q9ULH4 789 aa17.2■□□□□ 0.34
ECHDC2-223ENST00000542552 A0A0U1RQF3 1178 aa17.19■□□□□ 0.34
ECHDC2-223ENST00000542552 H3BNC9 293 aa17.19■□□□□ 0.34
ECHDC2-223ENST00000542552 SYT1P21579 422 aa17.19■□□□□ 0.34
ECHDC2-223ENST00000542552 BMPR1AP36894 532 aa17.19■□□□□ 0.34
ECHDC2-223ENST00000542552 CCT6AP40227 531 aaKnown RBP17.19■□□□□ 0.34
ECHDC2-223ENST00000542552 GATMP50440 423 aa17.19■□□□□ 0.34
ECHDC2-223ENST00000542552 ARL6IP4Q66PJ3 421 aaKnown RBP17.19■□□□□ 0.34
ECHDC2-223ENST00000542552 ZNF598Q86UK7 904 aaKnown RBP17.19■□□□□ 0.34
ECHDC2-223ENST00000542552 ECHDC2Q86YB7 292 aa17.19■□□□□ 0.34
ECHDC2-223ENST00000542552 IFNLR1Q8IU57 520 aaPredicted RBP17.19■□□□□ 0.34
ECHDC2-223ENST00000542552 ASAP3Q8TDY4 903 aa17.19■□□□□ 0.34
ECHDC2-223ENST00000542552 CCDC43Q96MW1 224 aaKnown RBP17.19■□□□□ 0.34
ECHDC2-223ENST00000542552 MMTAG2Q9BU76 263 aaKnown RBP17.19■□□□□ 0.34
ECHDC2-223ENST00000542552 RWDD3Q9Y3V2 267 aa17.19■□□□□ 0.34
ECHDC2-223ENST00000542552 MRPL42Q9Y6G3 142 aaKnown RBP17.19■□□□□ 0.34
ECHDC2-223ENST00000542552 VPS37CA5D8V6 355 aaPredicted RBP17.18■□□□□ 0.34
ECHDC2-223ENST00000542552 PP2D1A8MPX8 630 aa17.18■□□□□ 0.34
ECHDC2-223ENST00000542552 GTPBP6O43824 516 aaPredicted RBP17.18■□□□□ 0.34
ECHDC2-223ENST00000542552 RB1P06400 928 aa17.18■□□□□ 0.34
ECHDC2-223ENST00000542552 PTENP60484 403 aa17.18■□□□□ 0.34
ECHDC2-223ENST00000542552 FAM102BQ5T8I3 360 aa17.18■□□□□ 0.34
ECHDC2-223ENST00000542552 CATSPER4Q7RTX7 472 aa17.18■□□□□ 0.34
ECHDC2-223ENST00000542552 RNF149Q8NC42 400 aa17.18■□□□□ 0.34
ECHDC2-223ENST00000542552 SLC17A8Q8NDX2 589 aa17.18■□□□□ 0.34
ECHDC2-223ENST00000542552 MCPH1Q8NEM0 835 aa17.18■□□□□ 0.34
ECHDC2-223ENST00000542552 NFKBIZQ9BYH8 718 aa17.18■□□□□ 0.34
ECHDC2-223ENST00000542552 RNF19AQ9NV58 838 aa17.18■□□□□ 0.34
ECHDC2-223ENST00000542552 DACT1Q9NYF0 836 aa17.18■□□□□ 0.34
ECHDC2-223ENST00000542552 KIAA1024Q9UPX6 916 aa17.18■□□□□ 0.34
ECHDC2-223ENST00000542552 USO1O60763 962 aaKnown RBP17.17■□□□□ 0.34
ECHDC2-223ENST00000542552 EOMESO95936 686 aa17.17■□□□□ 0.34
ECHDC2-223ENST00000542552 ATF7P17544 494 aaPredicted RBP17.17■□□□□ 0.34
ECHDC2-223ENST00000542552 CYP11B2P19099 503 aa17.17■□□□□ 0.34
ECHDC2-223ENST00000542552 GLRA2P23416 452 aa17.17■□□□□ 0.34
ECHDC2-223ENST00000542552 HOXA11P31270 313 aaPredicted RBP17.17■□□□□ 0.34
ECHDC2-223ENST00000542552 PHKA2P46019 1235 aa17.17■□□□□ 0.34
ECHDC2-223ENST00000542552 CAPSQ13938 189 aa17.17■□□□□ 0.34
ECHDC2-223ENST00000542552 PCBP1Q15365 356 aaKnown RBP eCLIP17.17■□□□□ 0.34
ECHDC2-223ENST00000542552 CCDC85BQ15834 202 aaPredicted RBP17.17■□□□□ 0.34
ECHDC2-223ENST00000542552 KRT79Q5XKE5 535 aa17.17■□□□□ 0.34
ECHDC2-223ENST00000542552 PADI6Q6TGC4 694 aa17.17■□□□□ 0.34
ECHDC2-223ENST00000542552 SNX29Q8TEQ0 813 aa17.17■□□□□ 0.34
ECHDC2-223ENST00000542552 AGPAT5Q9NUQ2 364 aa17.17■□□□□ 0.34
ECHDC2-223ENST00000542552 ARHGEF35A5YM69 484 aa17.16■□□□□ 0.34
ECHDC2-223ENST00000542552 FGFR1P11362 822 aa17.16■□□□□ 0.34
ECHDC2-223ENST00000542552 CDC25AP30304 524 aa17.16■□□□□ 0.34
ECHDC2-223ENST00000542552 CTNNB1P35222 781 aa17.16■□□□□ 0.34
ECHDC2-223ENST00000542552 RESTQ13127 1097 aa17.16■□□□□ 0.34
ECHDC2-223ENST00000542552 GPM6BQ13491 265 aa17.16■□□□□ 0.34
ECHDC2-223ENST00000542552 TFDP1Q14186 410 aa17.16■□□□□ 0.34
ECHDC2-223ENST00000542552 PAN2Q504Q3 1202 aaKnown RBP17.16■□□□□ 0.34
ECHDC2-223ENST00000542552 HYIQ5T013 277 aa17.16■□□□□ 0.34
ECHDC2-223ENST00000542552 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.16■□□□□ 0.34
ECHDC2-223ENST00000542552 PPM1EQ8WY54 764 aa17.16■□□□□ 0.34
ECHDC2-223ENST00000542552 PLVAPQ9BX97 442 aa17.16■□□□□ 0.34
ECHDC2-223ENST00000542552 POLR3FQ9H1D9 316 aaPredicted RBP17.16■□□□□ 0.34
ECHDC2-223ENST00000542552 GPRC5CQ9NQ84 441 aa17.16■□□□□ 0.34
ECHDC2-223ENST00000542552 DDX19AQ9NUU7 478 aaKnown RBP17.16■□□□□ 0.34
ECHDC2-223ENST00000542552 MTMR6Q9Y217 621 aa17.16■□□□□ 0.34
ECHDC2-223ENST00000542552 PIN4Q9Y237 131 aaKnown RBP17.16■□□□□ 0.34
ECHDC2-223ENST00000542552 VWA3AA6NCI4 1184 aa17.15■□□□□ 0.34
ECHDC2-223ENST00000542552 TBKBP1A7MCY6 615 aa17.15■□□□□ 0.34
ECHDC2-223ENST00000542552 HOXA2O43364 376 aa17.15■□□□□ 0.34
ECHDC2-223ENST00000542552 ZNF623O75123 536 aa17.15■□□□□ 0.34
ECHDC2-223ENST00000542552 EYA4O95677 639 aa17.15■□□□□ 0.34
ECHDC2-223ENST00000542552 BMP15O95972 392 aa17.15■□□□□ 0.34
ECHDC2-223ENST00000542552 IBSPP21815 317 aaPredicted RBP17.15■□□□□ 0.34
ECHDC2-223ENST00000542552 AMHR2Q16671 573 aa17.15■□□□□ 0.34
ECHDC2-223ENST00000542552 NAALADL2Q58DX5 795 aa17.15■□□□□ 0.34
ECHDC2-223ENST00000542552 CLLU1OSQ5K130 101 aa17.15■□□□□ 0.34
ECHDC2-223ENST00000542552 P2RX5Q93086 422 aa17.15■□□□□ 0.34
ECHDC2-223ENST00000542552 MRPL38Q96DV4 380 aaKnown RBP17.15■□□□□ 0.34
ECHDC2-223ENST00000542552 CASD1Q96PB1 797 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms