RNA–Protein interactions for RNA: ENST00000541922.1

C2CD3-216, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 5

Gene C2CD3, Length 767 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-216ENST00000541922 ALG13Q9NP73 1137 aaKnown RBP24.64■■□□□ 1.54
C2CD3-216ENST00000541922 CHST12Q9NRB3 414 aa24.64■■□□□ 1.54
C2CD3-216ENST00000541922 AAASQ9NRG9 546 aa24.64■■□□□ 1.54
C2CD3-216ENST00000541922 ANKEF1Q9NU02 776 aa24.64■■□□□ 1.54
C2CD3-216ENST00000541922 PLAGL2Q9UPG8 496 aa24.64■■□□□ 1.54
C2CD3-216ENST00000541922 ATG2AQ2TAZ0 1938 aa24.63■■□□□ 1.53
C2CD3-216ENST00000541922 OR52Z1P0C646 297 aa24.63■■□□□ 1.53
C2CD3-216ENST00000541922 TRAPPC10P48553 1259 aa24.63■■□□□ 1.53
C2CD3-216ENST00000541922 KCNQ1P51787 676 aa24.63■■□□□ 1.53
C2CD3-216ENST00000541922 TCEAL5Q5H9L2 206 aa24.63■■□□□ 1.53
C2CD3-216ENST00000541922 CATSPER4Q7RTX7 472 aa24.63■■□□□ 1.53
C2CD3-216ENST00000541922 ABI1Q8IZP0 508 aa24.63■■□□□ 1.53
C2CD3-216ENST00000541922 KLHL23Q8NBE8 558 aa24.63■■□□□ 1.53
C2CD3-216ENST00000541922 RNF169Q8NCN4 708 aa24.63■■□□□ 1.53
C2CD3-216ENST00000541922 ADAMTS19Q8TE59 1207 aa24.63■■□□□ 1.53
C2CD3-216ENST00000541922 TBC1D32Q96NH3 1257 aa24.63■■□□□ 1.53
C2CD3-216ENST00000541922 MTRQ99707 1265 aa24.63■■□□□ 1.53
C2CD3-216ENST00000541922 TMEM117Q9H0C3 514 aa24.63■■□□□ 1.53
C2CD3-216ENST00000541922 PCDHB12Q9Y5F1 795 aa24.63■■□□□ 1.53
C2CD3-216ENST00000541922 MYO7AQ13402 2215 aa24.63■■□□□ 1.53
C2CD3-216ENST00000541922 REV3LO60673 3130 aa24.62■■□□□ 1.53
C2CD3-216ENST00000541922 CUL9Q8IWT3 2517 aa24.62■■□□□ 1.53
C2CD3-216ENST00000541922 A0A0U1RQF3 1178 aa24.62■■□□□ 1.53
C2CD3-216ENST00000541922 ASAP2O43150 1006 aa24.62■■□□□ 1.53
C2CD3-216ENST00000541922 SRGAP2CP0DJJ0 459 aa24.62■■□□□ 1.53
C2CD3-216ENST00000541922 BMP1P13497 986 aa24.62■■□□□ 1.53
C2CD3-216ENST00000541922 TECP42680 631 aa24.62■■□□□ 1.53
C2CD3-216ENST00000541922 MCM2P49736 904 aa24.62■■□□□ 1.53
C2CD3-216ENST00000541922 LAMTOR4Q0VGL1 99 aa24.62■■□□□ 1.53
C2CD3-216ENST00000541922 UBE2ZQ9H832 354 aaPredicted RBP24.62■■□□□ 1.53
C2CD3-216ENST00000541922 IFT122Q9HBG6 1241 aa24.62■■□□□ 1.53
C2CD3-216ENST00000541922 BRWD1Q9NSI6 2320 aa24.61■■□□□ 1.53
C2CD3-216ENST00000541922 CD2BP2O95400 341 aaKnown RBP24.61■■□□□ 1.53
C2CD3-216ENST00000541922 EOMESO95936 686 aa24.61■■□□□ 1.53
C2CD3-216ENST00000541922 ITGB1P05556 798 aa24.61■■□□□ 1.53
C2CD3-216ENST00000541922 U2AF2P26368 475 aaKnown RBP eCLIP24.61■■□□□ 1.53
C2CD3-216ENST00000541922 TWF2Q6IBS0 349 aaKnown RBP24.61■■□□□ 1.53
C2CD3-216ENST00000541922 FERMT3Q86UX7 667 aa24.61■■□□□ 1.53
C2CD3-216ENST00000541922 TYW1Q9NV66 732 aaKnown RBP24.61■■□□□ 1.53
C2CD3-216ENST00000541922 PIN4Q9Y237 131 aaKnown RBP24.61■■□□□ 1.53
C2CD3-216ENST00000541922 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP24.6■■□□□ 1.53
C2CD3-216ENST00000541922 DGAT1O75907 488 aa24.6■■□□□ 1.53
C2CD3-216ENST00000541922 CSPG5O95196 566 aa24.6■■□□□ 1.53
C2CD3-216ENST00000541922 XRCC6P12956 609 aaKnown RBP eCLIP24.6■■□□□ 1.53
C2CD3-216ENST00000541922 SRGAP1Q7Z6B7 1085 aa24.6■■□□□ 1.53
C2CD3-216ENST00000541922 ERMNQ8TAM6 284 aa24.6■■□□□ 1.53
C2CD3-216ENST00000541922 SPPL3Q8TCT6 385 aa24.6■■□□□ 1.53
C2CD3-216ENST00000541922 PIGOQ8TEQ8 1089 aa24.6■■□□□ 1.53
C2CD3-216ENST00000541922 CASD1Q96PB1 797 aa24.6■■□□□ 1.53
C2CD3-216ENST00000541922 UHRF1Q96T88 793 aaPredicted RBP24.6■■□□□ 1.53
C2CD3-216ENST00000541922 TUFT1Q9NNX1 390 aa24.6■■□□□ 1.53
C2CD3-216ENST00000541922 XPNPEP1Q9NQW7 623 aa24.6■■□□□ 1.53
C2CD3-216ENST00000541922 RNF19AQ9NV58 838 aa24.6■■□□□ 1.53
C2CD3-216ENST00000541922 SPATA31C1P0DKV0 1188 aa24.59■■□□□ 1.53
C2CD3-216ENST00000541922 RARRES1P49788 294 aa24.59■■□□□ 1.53
C2CD3-216ENST00000541922 MXD4Q14582 209 aaPredicted RBP24.59■■□□□ 1.53
C2CD3-216ENST00000541922 ZNF598Q86UK7 904 aaKnown RBP24.59■■□□□ 1.53
C2CD3-216ENST00000541922 RNF149Q8NC42 400 aa24.59■■□□□ 1.53
C2CD3-216ENST00000541922 HCSTQ9UBK5 93 aa24.59■■□□□ 1.53
C2CD3-216ENST00000541922 PLXNA4Q9HCM2 1894 aa24.59■■□□□ 1.53
C2CD3-216ENST00000541922 A0A087WWV3 80 aa24.58■■□□□ 1.53
C2CD3-216ENST00000541922 SKIP12755 728 aa24.58■■□□□ 1.53
C2CD3-216ENST00000541922 LAG3P18627 525 aa24.58■■□□□ 1.53
C2CD3-216ENST00000541922 KCNA5P22460 613 aa24.58■■□□□ 1.53
C2CD3-216ENST00000541922 PHKA2P46019 1235 aa24.58■■□□□ 1.53
C2CD3-216ENST00000541922 NBR1Q14596 966 aa24.58■■□□□ 1.53
C2CD3-216ENST00000541922 CSPP1Q1MSJ5 1256 aa24.58■■□□□ 1.53
C2CD3-216ENST00000541922 CLLU1OSQ5K130 101 aa24.58■■□□□ 1.53
C2CD3-216ENST00000541922 CATSPER3Q86XQ3 398 aa24.58■■□□□ 1.53
C2CD3-216ENST00000541922 LRRC43Q8N309 656 aa24.58■■□□□ 1.53
C2CD3-216ENST00000541922 COLGALT1Q8NBJ5 622 aa24.58■■□□□ 1.53
C2CD3-216ENST00000541922 POF1BQ8WVV4 589 aa24.58■■□□□ 1.53
C2CD3-216ENST00000541922 POLR3CQ9BUI4 534 aaPredicted RBP24.58■■□□□ 1.53
C2CD3-216ENST00000541922 TRAIPQ9BWF2 469 aa24.58■■□□□ 1.53
C2CD3-216ENST00000541922 CWH43Q9H720 699 aa24.58■■□□□ 1.53
C2CD3-216ENST00000541922 MED24O75448 989 aa24.57■■□□□ 1.52
C2CD3-216ENST00000541922 ATF7P17544 494 aaPredicted RBP24.57■■□□□ 1.52
C2CD3-216ENST00000541922 DNAJB1P25685 340 aa24.57■■□□□ 1.52
C2CD3-216ENST00000541922 GJB2P29033 226 aa24.57■■□□□ 1.52
C2CD3-216ENST00000541922 CAMK1Q14012 370 aa24.57■■□□□ 1.52
C2CD3-216ENST00000541922 TFDP1Q14186 410 aa24.57■■□□□ 1.52
C2CD3-216ENST00000541922 MCTP1Q6DN14 999 aa24.57■■□□□ 1.52
C2CD3-216ENST00000541922 EP400NLQ6ZTU2 488 aa24.57■■□□□ 1.52
C2CD3-216ENST00000541922 THNSL1Q8IYQ7 743 aa24.57■■□□□ 1.52
C2CD3-216ENST00000541922 HELQQ8TDG4 1101 aa24.57■■□□□ 1.52
C2CD3-216ENST00000541922 PABPC5Q96DU9 382 aaKnown RBP24.57■■□□□ 1.52
C2CD3-216ENST00000541922 MINDY3Q9H8M7 445 aa24.57■■□□□ 1.52
C2CD3-216ENST00000541922 AGPAT5Q9NUQ2 364 aa24.57■■□□□ 1.52
C2CD3-216ENST00000541922 TNFRSF10AO00220 468 aa24.56■■□□□ 1.52
C2CD3-216ENST00000541922 NCK2O43639 380 aa24.56■■□□□ 1.52
C2CD3-216ENST00000541922 RPA1P27694 616 aa24.56■■□□□ 1.52
C2CD3-216ENST00000541922 TOB1P50616 345 aaPredicted RBP24.56■■□□□ 1.52
C2CD3-216ENST00000541922 RAB27AP51159 221 aa24.56■■□□□ 1.52
C2CD3-216ENST00000541922 UBE3AQ05086 875 aa24.56■■□□□ 1.52
C2CD3-216ENST00000541922 LRRC55Q6ZSA7 311 aa24.56■■□□□ 1.52
C2CD3-216ENST00000541922 PPP2R3CQ969Q6 453 aa24.56■■□□□ 1.52
C2CD3-216ENST00000541922 NACC1Q96RE7 527 aa24.56■■□□□ 1.52
C2CD3-216ENST00000541922 FAM105AQ9NUU6 356 aa24.56■■□□□ 1.52
C2CD3-216ENST00000541922 H3BQV1 296 aa24.55■■□□□ 1.52
C2CD3-216ENST00000541922 USO1O60763 962 aaKnown RBP24.55■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms