RNA–Protein interactions for RNA: ENST00000540700.1

UBC-208, Transcript of ubiquitin C, humanhuman

TSL 2

Gene UBC, Length 627 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-208ENST00000540700 OTUD6AQ7L8S5 288 aa18.57■□□□□ 0.56
UBC-208ENST00000540700 ALYREFQ86V81 257 aaKnown RBP18.57■□□□□ 0.56
UBC-208ENST00000540700 SYT2Q8N9I0 419 aaPredicted RBP18.57■□□□□ 0.56
UBC-208ENST00000540700 MRPS27Q92552 414 aaKnown RBP18.57■□□□□ 0.56
UBC-208ENST00000540700 DHX58Q96C10 678 aa18.57■□□□□ 0.56
UBC-208ENST00000540700 MTRQ99707 1265 aa18.57■□□□□ 0.56
UBC-208ENST00000540700 POLD4Q9HCU8 107 aa18.57■□□□□ 0.56
UBC-208ENST00000540700 MTUS1Q9ULD2 1270 aa18.57■□□□□ 0.56
UBC-208ENST00000540700 DNM3Q9UQ16 869 aa18.57■□□□□ 0.56
UBC-208ENST00000540700 PCDHA2Q9Y5H9 948 aa18.57■□□□□ 0.56
UBC-208ENST00000540700 SCN5AQ14524 2016 aa18.57■□□□□ 0.56
UBC-208ENST00000540700 ARHGEF35A5YM69 484 aa18.56■□□□□ 0.56
UBC-208ENST00000540700 USO1O60763 962 aaKnown RBP18.56■□□□□ 0.56
UBC-208ENST00000540700 TXLNAP40222 546 aa18.56■□□□□ 0.56
UBC-208ENST00000540700 TBC1D8BQ0IIM8 1120 aa18.56■□□□□ 0.56
UBC-208ENST00000540700 PTK7Q13308 1070 aa18.56■□□□□ 0.56
UBC-208ENST00000540700 EMC2Q15006 297 aa18.56■□□□□ 0.56
UBC-208ENST00000540700 ARSHQ5FYA8 562 aa18.56■□□□□ 0.56
UBC-208ENST00000540700 TRAF7Q6Q0C0 670 aa18.56■□□□□ 0.56
UBC-208ENST00000540700 PADI6Q6TGC4 694 aa18.56■□□□□ 0.56
UBC-208ENST00000540700 KIAA0319LQ8IZA0 1049 aa18.56■□□□□ 0.56
UBC-208ENST00000540700 RASSF8Q8NHQ8 419 aa18.56■□□□□ 0.56
UBC-208ENST00000540700 DNAJB3Q8WWF6 145 aa18.56■□□□□ 0.56
UBC-208ENST00000540700 ZBED2Q9BTP6 218 aa18.56■□□□□ 0.56
UBC-208ENST00000540700 OSBPL7Q9BZF2 842 aa18.56■□□□□ 0.56
UBC-208ENST00000540700 GPRC5CQ9NQ84 441 aa18.56■□□□□ 0.56
UBC-208ENST00000540700 KCNH3Q9ULD8 1083 aa18.56■□□□□ 0.56
UBC-208ENST00000540700 NPHP3-ACAD11A0A0J9YXS1 232 aa18.55■□□□□ 0.56
UBC-208ENST00000540700 PI4K2BG5E9Z4 385 aa18.55■□□□□ 0.56
UBC-208ENST00000540700 PITPNM1O00562 1244 aa18.55■□□□□ 0.56
UBC-208ENST00000540700 ACTN4O43707 911 aaKnown RBP18.55■□□□□ 0.56
UBC-208ENST00000540700 PRPF40AO75400 957 aaKnown RBP18.55■□□□□ 0.56
UBC-208ENST00000540700 GNAT1P11488 350 aa18.55■□□□□ 0.56
UBC-208ENST00000540700 LIG1P18858 919 aa18.55■□□□□ 0.56
UBC-208ENST00000540700 BFSP2Q13515 415 aa18.55■□□□□ 0.56
UBC-208ENST00000540700 DHX8Q14562 1220 aaKnown RBP18.55■□□□□ 0.56
UBC-208ENST00000540700 RINT1Q6NUQ1 792 aa18.55■□□□□ 0.56
UBC-208ENST00000540700 EFCAB12Q6NXP0 572 aa18.55■□□□□ 0.56
UBC-208ENST00000540700 C1orf186Q6ZWK4 172 aa18.55■□□□□ 0.56
UBC-208ENST00000540700 MAEAQ7L5Y9 396 aa18.55■□□□□ 0.56
UBC-208ENST00000540700 ENGASEQ8NFI3 743 aa18.55■□□□□ 0.56
UBC-208ENST00000540700 LARP4BQ92615 738 aaKnown RBP18.55■□□□□ 0.56
UBC-208ENST00000540700 STAMQ92783 540 aa18.55■□□□□ 0.56
UBC-208ENST00000540700 TMEM143Q96AN5 459 aa18.55■□□□□ 0.56
UBC-208ENST00000540700 FAM49AQ9H0Q0 323 aaPredicted RBP18.55■□□□□ 0.56
UBC-208ENST00000540700 LMBRD1Q9NUN5 540 aa18.55■□□□□ 0.56
UBC-208ENST00000540700 FAM13BQ9NYF5 915 aa18.55■□□□□ 0.56
UBC-208ENST00000540700 CCDC39Q9UFE4 941 aa18.55■□□□□ 0.56
UBC-208ENST00000540700 SMIM35A0A1B0GVV1 85 aa18.54■□□□□ 0.56
UBC-208ENST00000540700 BAIAP3O94812 1187 aa18.54■□□□□ 0.56
UBC-208ENST00000540700 CYP11B2P19099 503 aa18.54■□□□□ 0.56
UBC-208ENST00000540700 STAT6P42226 847 aa18.54■□□□□ 0.56
UBC-208ENST00000540700 POLGP54098 1239 aaPredicted RBP18.54■□□□□ 0.56
UBC-208ENST00000540700 MAPK7Q13164 816 aa18.54■□□□□ 0.56
UBC-208ENST00000540700 SNW1Q13573 536 aaKnown RBP18.54■□□□□ 0.56
UBC-208ENST00000540700 LONRF3Q496Y0 759 aa18.54■□□□□ 0.56
UBC-208ENST00000540700 CCDC73Q6ZRK6 1079 aa18.54■□□□□ 0.56
UBC-208ENST00000540700 DAW1Q8N136 415 aa18.54■□□□□ 0.56
UBC-208ENST00000540700 METTL13Q8N6R0 699 aa18.54■□□□□ 0.56
UBC-208ENST00000540700 SUGCTQ9HAC7 445 aa18.54■□□□□ 0.56
UBC-208ENST00000540700 STK17AQ9UEE5 414 aa18.54■□□□□ 0.56
UBC-208ENST00000540700 SERTAD1Q9UHV2 236 aa18.54■□□□□ 0.56
UBC-208ENST00000540700 PPME1Q9Y570 386 aa18.54■□□□□ 0.56
UBC-208ENST00000540700 MAGEB2O15479 319 aa18.53■□□□□ 0.56
UBC-208ENST00000540700 DGAT1O75907 488 aa18.53■□□□□ 0.56
UBC-208ENST00000540700 VTNP04004 478 aa18.53■□□□□ 0.56
UBC-208ENST00000540700 SSBP05455 408 aaKnown RBP eCLIP18.53■□□□□ 0.56
UBC-208ENST00000540700 CKBP12277 381 aa18.53■□□□□ 0.56
UBC-208ENST00000540700 CASP1P29466 404 aa18.53■□□□□ 0.56
UBC-208ENST00000540700 RFC5P40937 340 aa18.53■□□□□ 0.56
UBC-208ENST00000540700 WDR5P61964 334 aaKnown RBP18.53■□□□□ 0.56
UBC-208ENST00000540700 CACNB1Q02641 598 aaPredicted RBP18.53■□□□□ 0.56
UBC-208ENST00000540700 RBL2Q08999 1139 aa18.53■□□□□ 0.56
UBC-208ENST00000540700 MGAT3Q09327 533 aa18.53■□□□□ 0.56
UBC-208ENST00000540700 TMEM62Q0P6H9 643 aa18.53■□□□□ 0.56
UBC-208ENST00000540700 GPNMBQ14956 572 aa18.53■□□□□ 0.56
UBC-208ENST00000540700 GRAMD1CQ8IYS0 662 aa18.53■□□□□ 0.56
UBC-208ENST00000540700 FMR1NBQ8N0W7 255 aaPredicted RBP18.53■□□□□ 0.56
UBC-208ENST00000540700 KCTD17Q8N5Z5 321 aa18.53■□□□□ 0.56
UBC-208ENST00000540700 ASAP3Q8TDY4 903 aa18.53■□□□□ 0.56
UBC-208ENST00000540700 ZNF668Q96K58 619 aaPredicted RBP18.53■□□□□ 0.56
UBC-208ENST00000540700 PPP1R16BQ96T49 567 aa18.53■□□□□ 0.56
UBC-208ENST00000540700 CDHR5Q9HBB8 845 aa18.53■□□□□ 0.56
UBC-208ENST00000540700 ATP6V0A4Q9HBG4 840 aa18.53■□□□□ 0.56
UBC-208ENST00000540700 MYMKA6NI61 221 aa18.52■□□□□ 0.56
UBC-208ENST00000540700 RSPH10B2B2RC85 870 aa18.52■□□□□ 0.56
UBC-208ENST00000540700 CTSHP09668 335 aa18.52■□□□□ 0.56
UBC-208ENST00000540700 RSPH10BP0C881 870 aa18.52■□□□□ 0.56
UBC-208ENST00000540700 SSTR3P32745 418 aaPredicted RBP18.52■□□□□ 0.56
UBC-208ENST00000540700 ARL2P36404 184 aa18.52■□□□□ 0.56
UBC-208ENST00000540700 SYKP43405 635 aa18.52■□□□□ 0.56
UBC-208ENST00000540700 DEFB103AP81534 67 aa18.52■□□□□ 0.56
UBC-208ENST00000540700 RAD51AP2Q09MP3 1159 aa18.52■□□□□ 0.56
UBC-208ENST00000540700 MBTPS1Q14703 1052 aa18.52■□□□□ 0.56
UBC-208ENST00000540700 CSPP1Q1MSJ5 1256 aa18.52■□□□□ 0.56
UBC-208ENST00000540700 ZNF618Q5T7W0 954 aa18.52■□□□□ 0.56
UBC-208ENST00000540700 TAF2Q6P1X5 1199 aa18.52■□□□□ 0.56
UBC-208ENST00000540700 RPAINQ86UA6 219 aa18.52■□□□□ 0.56
UBC-208ENST00000540700 GPBP1Q86WP2 473 aa18.52■□□□□ 0.56
UBC-208ENST00000540700 KSR1Q8IVT5 923 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms