RNA–Protein interactions for RNA: ENST00000540486.5

TRAPPC1-202, Transcript of trafficking protein particle complex 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TRAPPC1, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-202ENST00000540486 CFHP08603 1231 aa10.11□□□□□ -0.79
TRAPPC1-202ENST00000540486 CALM1P0DP23 149 aa10.11□□□□□ -0.79
TRAPPC1-202ENST00000540486 CALM2P0DP24 149 aa10.11□□□□□ -0.79
TRAPPC1-202ENST00000540486 CALM3P0DP25 149 aa10.11□□□□□ -0.79
TRAPPC1-202ENST00000540486 PMLP29590 882 aa10.11□□□□□ -0.79
TRAPPC1-202ENST00000540486 CDC27P30260 824 aa10.11□□□□□ -0.79
TRAPPC1-202ENST00000540486 EVCP57679 992 aa10.11□□□□□ -0.79
TRAPPC1-202ENST00000540486 SMC1AQ14683 1233 aaKnown RBP10.11□□□□□ -0.79
TRAPPC1-202ENST00000540486 IER5Q5VY09 327 aa10.11□□□□□ -0.79
TRAPPC1-202ENST00000540486 CCDC149Q6ZUS6 474 aa10.11□□□□□ -0.79
TRAPPC1-202ENST00000540486 VSIG10LQ86VR7 867 aa10.11□□□□□ -0.79
TRAPPC1-202ENST00000540486 MAML2Q8IZL2 1156 aaPredicted RBP10.11□□□□□ -0.79
TRAPPC1-202ENST00000540486 CTCFLQ8NI51 663 aaPredicted RBP10.11□□□□□ -0.79
TRAPPC1-202ENST00000540486 BRF1Q92994 677 aa10.11□□□□□ -0.79
TRAPPC1-202ENST00000540486 NXPE3Q969Y0 559 aa10.11□□□□□ -0.79
TRAPPC1-202ENST00000540486 EPC1Q9H2F5 836 aa10.11□□□□□ -0.79
TRAPPC1-202ENST00000540486 MAP3K20Q9NYL2 800 aaKnown RBP10.11□□□□□ -0.79
TRAPPC1-202ENST00000540486 PADI3Q9ULW8 664 aa10.11□□□□□ -0.79
TRAPPC1-202ENST00000540486 SMG5Q9UPR3 1016 aaKnown RBP10.11□□□□□ -0.79
TRAPPC1-202ENST00000540486 MRPL11Q9Y3B7 192 aaKnown RBP10.11□□□□□ -0.79
TRAPPC1-202ENST00000540486 MYH7BA7E2Y1 1941 aa10.11□□□□□ -0.79
TRAPPC1-202ENST00000540486 FLNBO75369 2602 aaKnown RBP10.1□□□□□ -0.79
TRAPPC1-202ENST00000540486 CACNA1IQ9P0X4 2223 aa10.1□□□□□ -0.79
TRAPPC1-202ENST00000540486 PNMA6FA0A0J9YX94 578 aa10.1□□□□□ -0.79
TRAPPC1-202ENST00000540486 C2orf71A6NGG8 1288 aa10.1□□□□□ -0.79
TRAPPC1-202ENST00000540486 OPLAHO14841 1288 aa10.1□□□□□ -0.79
TRAPPC1-202ENST00000540486 ZBTB43O43298 467 aa10.1□□□□□ -0.79
TRAPPC1-202ENST00000540486 NARSO43776 548 aaKnown RBP10.1□□□□□ -0.79
TRAPPC1-202ENST00000540486 MYCLP12524 364 aaPredicted RBP10.1□□□□□ -0.79
TRAPPC1-202ENST00000540486 KIF5BP33176 963 aa10.1□□□□□ -0.79
TRAPPC1-202ENST00000540486 ADD1P35611 737 aaKnown RBP10.1□□□□□ -0.79
TRAPPC1-202ENST00000540486 PPM1AP35813 382 aa10.1□□□□□ -0.79
TRAPPC1-202ENST00000540486 ANAPC15P60006 121 aa10.1□□□□□ -0.79
TRAPPC1-202ENST00000540486 MRPS6P82932 125 aaKnown RBP10.1□□□□□ -0.79
TRAPPC1-202ENST00000540486 FUT2Q10981 343 aa10.1□□□□□ -0.79
TRAPPC1-202ENST00000540486 NEDD9Q14511 834 aa10.1□□□□□ -0.79
TRAPPC1-202ENST00000540486 PADI6Q6TGC4 694 aa10.1□□□□□ -0.79
TRAPPC1-202ENST00000540486 SYNE3Q6ZMZ3 975 aa10.1□□□□□ -0.79
TRAPPC1-202ENST00000540486 PACS2Q86VP3 889 aa10.1□□□□□ -0.79
TRAPPC1-202ENST00000540486 MICU3Q86XE3 530 aa10.1□□□□□ -0.79
TRAPPC1-202ENST00000540486 HOMER1Q86YM7 354 aa10.1□□□□□ -0.79
TRAPPC1-202ENST00000540486 CCDC82Q8N4S0 544 aa10.1□□□□□ -0.79
TRAPPC1-202ENST00000540486 C12orf76Q8N812 135 aaPredicted RBP10.1□□□□□ -0.79
TRAPPC1-202ENST00000540486 ZBTB44Q8NCP5 570 aa10.1□□□□□ -0.79
TRAPPC1-202ENST00000540486 DNAJB3Q8WWF6 145 aa10.1□□□□□ -0.79
TRAPPC1-202ENST00000540486 PIBF1Q8WXW3 757 aa10.1□□□□□ -0.79
TRAPPC1-202ENST00000540486 PDCD2LQ9BRP1 358 aa10.1□□□□□ -0.79
TRAPPC1-202ENST00000540486 SPZ1Q9BXG8 430 aa10.1□□□□□ -0.79
TRAPPC1-202ENST00000540486 AMNQ9BXJ7 453 aa10.1□□□□□ -0.79
TRAPPC1-202ENST00000540486 CWH43Q9H720 699 aa10.1□□□□□ -0.79
TRAPPC1-202ENST00000540486 KIAA1468Q9P260 1216 aa10.1□□□□□ -0.79
TRAPPC1-202ENST00000540486 GMEB2Q9UKD1 530 aa10.1□□□□□ -0.79
TRAPPC1-202ENST00000540486 CYP46A1Q9Y6A2 500 aa10.1□□□□□ -0.79
TRAPPC1-202ENST00000540486 hCG_1642624A0A1W2PR95 340 aa10.09□□□□□ -0.79
TRAPPC1-202ENST00000540486 MBLAC1A4D2B0 266 aaPredicted RBP10.09□□□□□ -0.79
TRAPPC1-202ENST00000540486 LAMTOR5O43504 91 aa10.09□□□□□ -0.79
TRAPPC1-202ENST00000540486 LILRB5O75023 590 aa10.09□□□□□ -0.79
TRAPPC1-202ENST00000540486 LRP3O75074 770 aa10.09□□□□□ -0.79
TRAPPC1-202ENST00000540486 SRFP11831 508 aa10.09□□□□□ -0.79
TRAPPC1-202ENST00000540486 PDIA3P30101 505 aaKnown RBP10.09□□□□□ -0.79
TRAPPC1-202ENST00000540486 GNAQP50148 359 aa10.09□□□□□ -0.79
TRAPPC1-202ENST00000540486 PAK2Q13177 524 aa10.09□□□□□ -0.79
TRAPPC1-202ENST00000540486 FAM102BQ5T8I3 360 aa10.09□□□□□ -0.79
TRAPPC1-202ENST00000540486 METTL7BQ6UX53 244 aa10.09□□□□□ -0.79
TRAPPC1-202ENST00000540486 TMTC3Q6ZXV5 915 aa10.09□□□□□ -0.79
TRAPPC1-202ENST00000540486 GPR149Q86SP6 731 aa10.09□□□□□ -0.79
TRAPPC1-202ENST00000540486 SPNS2Q8IVW8 549 aa10.09□□□□□ -0.79
TRAPPC1-202ENST00000540486 SAMD3Q8N6K7 520 aa10.09□□□□□ -0.79
TRAPPC1-202ENST00000540486 GLG1Q92896 1179 aa10.09□□□□□ -0.79
TRAPPC1-202ENST00000540486 KIF2CQ99661 725 aa10.09□□□□□ -0.79
TRAPPC1-202ENST00000540486 LZTS2Q9BRK4 669 aa10.09□□□□□ -0.79
TRAPPC1-202ENST00000540486 C1orf112Q9NSG2 853 aa10.09□□□□□ -0.79
TRAPPC1-202ENST00000540486 PDRG1Q9NUG6 133 aa10.09□□□□□ -0.79
TRAPPC1-202ENST00000540486 ZSCAN32Q9NX65 697 aa10.09□□□□□ -0.79
TRAPPC1-202ENST00000540486 TUBE1Q9UJT0 475 aa10.09□□□□□ -0.79
TRAPPC1-202ENST00000540486 CA14Q9ULX7 337 aa10.09□□□□□ -0.79
TRAPPC1-202ENST00000540486 PCDHA1Q9Y5I3 950 aa10.09□□□□□ -0.79
TRAPPC1-202ENST00000540486 KIAA1671Q9BY89 1806 aa10.09□□□□□ -0.79
TRAPPC1-202ENST00000540486 M0QZ92 97 aa10.08□□□□□ -0.8
TRAPPC1-202ENST00000540486 GLULP15104 373 aa10.08□□□□□ -0.8
TRAPPC1-202ENST00000540486 RCAN1P53805 252 aa10.08□□□□□ -0.8
TRAPPC1-202ENST00000540486 FGD1P98174 961 aa10.08□□□□□ -0.8
TRAPPC1-202ENST00000540486 GHRHRQ02643 423 aa10.08□□□□□ -0.8
TRAPPC1-202ENST00000540486 GIT2Q14161 759 aa10.08□□□□□ -0.8
TRAPPC1-202ENST00000540486 NTRK3Q16288 839 aa10.08□□□□□ -0.8
TRAPPC1-202ENST00000540486 RTN1Q16799 776 aa10.08□□□□□ -0.8
TRAPPC1-202ENST00000540486 KCNT2Q6UVM3 1135 aa10.08□□□□□ -0.8
TRAPPC1-202ENST00000540486 SLC24A5Q71RS6 500 aa10.08□□□□□ -0.8
TRAPPC1-202ENST00000540486 SLC44A3Q8N4M1 653 aa10.08□□□□□ -0.8
TRAPPC1-202ENST00000540486 TMEM87AQ8NBN3 555 aa10.08□□□□□ -0.8
TRAPPC1-202ENST00000540486 PJA1Q8NG27 643 aa10.08□□□□□ -0.8
TRAPPC1-202ENST00000540486 NELL1Q92832 810 aa10.08□□□□□ -0.8
TRAPPC1-202ENST00000540486 SHDQ96IW2 340 aa10.08□□□□□ -0.8
TRAPPC1-202ENST00000540486 ZNF558Q96NG5 402 aa10.08□□□□□ -0.8
TRAPPC1-202ENST00000540486 BCO2Q9BYV7 579 aa10.08□□□□□ -0.8
TRAPPC1-202ENST00000540486 PARD6AQ9NPB6 346 aa10.08□□□□□ -0.8
TRAPPC1-202ENST00000540486 ARHGEF3Q9NR81 526 aa10.08□□□□□ -0.8
TRAPPC1-202ENST00000540486 RBM28Q9NW13 759 aaKnown RBP10.08□□□□□ -0.8
TRAPPC1-202ENST00000540486 SPG21Q9NZD8 308 aa10.08□□□□□ -0.8
TRAPPC1-202ENST00000540486 ZMIZ1Q9ULJ6 1067 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms