RNA–Protein interactions for RNA: ENST00000540309.5

GPD2-213, Transcript of glycerol-3-phosphate dehydrogenase 2, humanhuman

TSL 1 (best) BASIC

Gene GPD2, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPD2-213ENST00000540309 ANKRD62A6NC57 917 aa11.15□□□□□ -0.62
GPD2-213ENST00000540309 DDX3XO00571 662 aaKnown RBP eCLIP11.15□□□□□ -0.629e-13■■■□□ 17.3
GPD2-213ENST00000540309 BACH1O14867 736 aa11.15□□□□□ -0.62
GPD2-213ENST00000540309 RTN3O95197 1032 aaPredicted RBP11.15□□□□□ -0.62
GPD2-213ENST00000540309 TTLL1O95922 423 aa11.15□□□□□ -0.62
GPD2-213ENST00000540309 LINGO3P0C6S8 592 aa11.15□□□□□ -0.62
GPD2-213ENST00000540309 ATF3P18847 181 aa11.15□□□□□ -0.62
GPD2-213ENST00000540309 VCAM1P19320 739 aa11.15□□□□□ -0.62
GPD2-213ENST00000540309 YARSP54577 528 aaKnown RBP11.15□□□□□ -0.62
GPD2-213ENST00000540309 GALCP54803 685 aa11.15□□□□□ -0.62
GPD2-213ENST00000540309 PLTPP55058 493 aa11.15□□□□□ -0.62
GPD2-213ENST00000540309 IFI35P80217 286 aaPredicted RBP11.15□□□□□ -0.62
GPD2-213ENST00000540309 MTFR1Q15390 333 aa11.15□□□□□ -0.62
GPD2-213ENST00000540309 MTHFD1LQ6UB35 978 aa11.15□□□□□ -0.62
GPD2-213ENST00000540309 ERICH1Q86X53 443 aa11.15□□□□□ -0.62
GPD2-213ENST00000540309 UBL4BQ8N7F7 174 aa11.15□□□□□ -0.62
GPD2-213ENST00000540309 SPDYE1Q8NFV5 336 aaPredicted RBP11.15□□□□□ -0.62
GPD2-213ENST00000540309 STK32AQ8WU08 396 aa11.15□□□□□ -0.62
GPD2-213ENST00000540309 CTNNBL1Q8WYA6 563 aaPredicted RBP11.15□□□□□ -0.62
GPD2-213ENST00000540309 TRAPPC9Q96Q05 1148 aa11.15□□□□□ -0.62
GPD2-213ENST00000540309 SYT11Q9BT88 431 aa11.15□□□□□ -0.62
GPD2-213ENST00000540309 GLT8D2Q9H1C3 349 aa11.15□□□□□ -0.62
GPD2-213ENST00000540309 VCXQ9H320 206 aa11.15□□□□□ -0.62
GPD2-213ENST00000540309 WHRNQ9P202 907 aa11.15□□□□□ -0.62
GPD2-213ENST00000540309 CTTNBP2NLQ9P2B4 639 aa11.15□□□□□ -0.62
GPD2-213ENST00000540309 LGALS13Q9UHV8 139 aa11.15□□□□□ -0.62
GPD2-213ENST00000540309 SH3BGRP55822 239 aaPredicted RBP11.14□□□□□ -0.63
GPD2-213ENST00000540309 MECOMQ03112 1051 aa11.14□□□□□ -0.63
GPD2-213ENST00000540309 ARID5AQ03989 594 aa11.14□□□□□ -0.63
GPD2-213ENST00000540309 NR1H3Q13133 447 aa11.14□□□□□ -0.63
GPD2-213ENST00000540309 SF3B3Q15393 1217 aaKnown RBP11.14□□□□□ -0.63
GPD2-213ENST00000540309 TSNAXIP1Q2TAA8 658 aa11.14□□□□□ -0.63
GPD2-213ENST00000540309 GRIPAP1Q4V328 841 aa11.14□□□□□ -0.63
GPD2-213ENST00000540309 SUSD4Q5VX71 490 aa11.14□□□□□ -0.63
GPD2-213ENST00000540309 BARGINQ6ZT62 677 aa11.14□□□□□ -0.63
GPD2-213ENST00000540309 SDCCAG8Q86SQ7 713 aaPredicted RBP11.14□□□□□ -0.63
GPD2-213ENST00000540309 RIBC1Q8N443 379 aaPredicted RBP11.14□□□□□ -0.63
GPD2-213ENST00000540309 C7orf43Q8WVR3 580 aa11.14□□□□□ -0.63
GPD2-213ENST00000540309 DYDC1Q8WWB3 177 aa11.14□□□□□ -0.63
GPD2-213ENST00000540309 DTNBP1Q96EV8 351 aa11.14□□□□□ -0.63
GPD2-213ENST00000540309 BICD1Q96G01 975 aa11.14□□□□□ -0.63
GPD2-213ENST00000540309 FAM84BQ96KN1 310 aaPredicted RBP11.14□□□□□ -0.63
GPD2-213ENST00000540309 TSC22D3Q99576 134 aa11.14□□□□□ -0.63
GPD2-213ENST00000540309 TMEM47Q9BQJ4 181 aa11.14□□□□□ -0.63
GPD2-213ENST00000540309 TRIM51Q9BSJ1 452 aa11.14□□□□□ -0.63
GPD2-213ENST00000540309 MKNK1Q9BUB5 465 aa11.14□□□□□ -0.63
GPD2-213ENST00000540309 OSBPL1AQ9BXW6 950 aa11.14□□□□□ -0.63
GPD2-213ENST00000540309 STK33Q9BYT3 514 aa11.14□□□□□ -0.63
GPD2-213ENST00000540309 PAPOLBQ9NRJ5 636 aaKnown RBP11.14□□□□□ -0.63
GPD2-213ENST00000540309 CYP39A1Q9NYL5 469 aa11.14□□□□□ -0.63
GPD2-213ENST00000540309 ASAP1Q9ULH1 1129 aa11.14□□□□□ -0.63
GPD2-213ENST00000540309 STARD13Q9Y3M8 1113 aa11.14□□□□□ -0.63
GPD2-213ENST00000540309 PASKQ96RG2 1323 aa11.14□□□□□ -0.63
GPD2-213ENST00000540309 PDLIM1O00151 329 aa11.14□□□□□ -0.63
GPD2-213ENST00000540309 MTA2O94776 668 aa11.14□□□□□ -0.63
GPD2-213ENST00000540309 TSPY3P0CV98 308 aa11.14□□□□□ -0.63
GPD2-213ENST00000540309 TSPY8P0CW00 308 aa11.14□□□□□ -0.63
GPD2-213ENST00000540309 NR2F2P24468 414 aa11.14□□□□□ -0.63
GPD2-213ENST00000540309 MAN1A1P33908 653 aa11.14□□□□□ -0.63
GPD2-213ENST00000540309 ABL2P42684 1182 aa11.14□□□□□ -0.63
GPD2-213ENST00000540309 PPP4CP60510 307 aa11.14□□□□□ -0.63
GPD2-213ENST00000540309 STRN3Q13033 797 aa11.14□□□□□ -0.63
GPD2-213ENST00000540309 SETDB1Q15047 1291 aa11.14□□□□□ -0.63
GPD2-213ENST00000540309 KNOP1Q1ED39 458 aaKnown RBP11.14□□□□□ -0.63
GPD2-213ENST00000540309 EPM2AIP1Q7L775 607 aaPredicted RBP11.14□□□□□ -0.63
GPD2-213ENST00000540309 RELL1Q8IUW5 271 aa11.14□□□□□ -0.63
GPD2-213ENST00000540309 ZNF444Q8N0Y2 327 aaPredicted RBP11.14□□□□□ -0.63
GPD2-213ENST00000540309 FITM2Q8N6M3 262 aa11.14□□□□□ -0.63
GPD2-213ENST00000540309 SLC35G2Q8TBE7 412 aa11.14□□□□□ -0.63
GPD2-213ENST00000540309 RBM46Q8TBY0 533 aaKnown RBP11.14□□□□□ -0.63
GPD2-213ENST00000540309 PIGOQ8TEQ8 1089 aa11.14□□□□□ -0.63
GPD2-213ENST00000540309 SEMA4AQ9H3S1 761 aa11.14□□□□□ -0.63
GPD2-213ENST00000540309 GOPCQ9HD26 462 aa11.14□□□□□ -0.63
GPD2-213ENST00000540309 SIX2Q9NPC8 291 aa11.14□□□□□ -0.63
GPD2-213ENST00000540309 UBN1Q9NPG3 1134 aa11.14□□□□□ -0.63
GPD2-213ENST00000540309 MTUS1Q9ULD2 1270 aa11.14□□□□□ -0.63
GPD2-213ENST00000540309 NAV1Q8NEY1 1877 aa11.13□□□□□ -0.63
GPD2-213ENST00000540309 ADGRA3Q8IWK6 1321 aa11.13□□□□□ -0.63
GPD2-213ENST00000540309 KAT6BQ8WYB5 2073 aa11.13□□□□□ -0.63
GPD2-213ENST00000540309 TCP11X1B4DZS4 312 aa11.13□□□□□ -0.63
GPD2-213ENST00000540309 SNAP23O00161 211 aa11.13□□□□□ -0.63
GPD2-213ENST00000540309 ECE2O60344 883 aa11.13□□□□□ -0.63
GPD2-213ENST00000540309 DCTN3O75935 186 aa11.13□□□□□ -0.63
GPD2-213ENST00000540309 SOX5P35711 763 aa11.13□□□□□ -0.63
GPD2-213ENST00000540309 RAB27AP51159 221 aa11.13□□□□□ -0.63
GPD2-213ENST00000540309 RPS6KA3P51812 740 aa11.13□□□□□ -0.63
GPD2-213ENST00000540309 KLC1Q07866 573 aa11.13□□□□□ -0.63
GPD2-213ENST00000540309 LRRC41Q15345 812 aa11.13□□□□□ -0.63
GPD2-213ENST00000540309 DCAF12L1Q5VU92 463 aa11.13□□□□□ -0.63
GPD2-213ENST00000540309 NUGGCQ68CJ6 796 aa11.13□□□□□ -0.63
GPD2-213ENST00000540309 IRGCQ6NXR0 463 aa11.13□□□□□ -0.63
GPD2-213ENST00000540309 ZNF398Q8TD17 642 aa11.13□□□□□ -0.63
GPD2-213ENST00000540309 ARHGEF2Q92974 986 aaKnown RBP11.13□□□□□ -0.63
GPD2-213ENST00000540309 TUBB6Q9BUF5 446 aa11.13□□□□□ -0.63
GPD2-213ENST00000540309 WNT8AQ9H1J5 351 aa11.13□□□□□ -0.63
GPD2-213ENST00000540309 TLE6Q9H808 572 aa11.13□□□□□ -0.63
GPD2-213ENST00000540309 FGFR1OP2Q9NVK5 253 aa11.13□□□□□ -0.63
GPD2-213ENST00000540309 MCM9Q9NXL9 1143 aa11.13□□□□□ -0.63
GPD2-213ENST00000540309 ZBTB1Q9Y2K1 713 aa11.13□□□□□ -0.63
GPD2-213ENST00000540309 TLDC2A0PJX2 215 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms