RNA–Protein interactions for RNA: ENST00000540209.5

RAP1B-221, Transcript of RAP1B, member of RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAP1B, Length 1,264 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-221ENST00000540209 RNF19AQ9NV58 838 aa21.66■■□□□ 1.06
RAP1B-221ENST00000540209 COL4A3BPQ9Y5P4 624 aa21.66■■□□□ 1.06
RAP1B-221ENST00000540209 A0A0U1RQF3 1178 aa21.65■■□□□ 1.06
RAP1B-221ENST00000540209 POTEMA6NI47 508 aa21.65■■□□□ 1.06
RAP1B-221ENST00000540209 GAS2O43903 313 aaKnown RBP21.65■■□□□ 1.06
RAP1B-221ENST00000540209 ST18O60284 1047 aa21.65■■□□□ 1.06
RAP1B-221ENST00000540209 ITGB1P05556 798 aa21.65■■□□□ 1.06
RAP1B-221ENST00000540209 ATP2B1P20020 1258 aa21.65■■□□□ 1.06
RAP1B-221ENST00000540209 SFPQP23246 707 aaKnown RBP eCLIP21.65■■□□□ 1.06
RAP1B-221ENST00000540209 ORC2Q13416 577 aaPredicted RBP21.65■■□□□ 1.06
RAP1B-221ENST00000540209 EMC2Q15006 297 aa21.65■■□□□ 1.06
RAP1B-221ENST00000540209 XKR9Q5GH70 373 aa21.65■■□□□ 1.06
RAP1B-221ENST00000540209 NOSTRINQ8IVI9 506 aa21.65■■□□□ 1.06
RAP1B-221ENST00000540209 KLHL23Q8NBE8 558 aa21.65■■□□□ 1.06
RAP1B-221ENST00000540209 NLRP4Q96MN2 994 aa21.65■■□□□ 1.06
RAP1B-221ENST00000540209 INO80BQ9C086 356 aaPredicted RBP21.65■■□□□ 1.06
RAP1B-221ENST00000540209 CHST12Q9NRB3 414 aa21.65■■□□□ 1.06
RAP1B-221ENST00000540209 DACT1Q9NYF0 836 aa21.65■■□□□ 1.06
RAP1B-221ENST00000540209 HOXA2O43364 376 aa21.64■■□□□ 1.05
RAP1B-221ENST00000540209 ATF7P17544 494 aaPredicted RBP21.64■■□□□ 1.05
RAP1B-221ENST00000540209 DNAJB1P25685 340 aa21.64■■□□□ 1.05
RAP1B-221ENST00000540209 ZNF598Q86UK7 904 aaKnown RBP21.64■■□□□ 1.05
RAP1B-221ENST00000540209 SPPL3Q8TCT6 385 aa21.64■■□□□ 1.05
RAP1B-221ENST00000540209 PRPF31Q8WWY3 499 aaKnown RBP21.64■■□□□ 1.05
RAP1B-221ENST00000540209 PSPC1Q8WXF1 523 aaKnown RBP21.64■■□□□ 1.05
RAP1B-221ENST00000540209 TMEM143Q96AN5 459 aa21.64■■□□□ 1.05
RAP1B-221ENST00000540209 CASD1Q96PB1 797 aa21.64■■□□□ 1.05
RAP1B-221ENST00000540209 UHRF1Q96T88 793 aaPredicted RBP21.64■■□□□ 1.05
RAP1B-221ENST00000540209 TRAIPQ9BWF2 469 aa21.64■■□□□ 1.05
RAP1B-221ENST00000540209 TMEM117Q9H0C3 514 aa21.64■■□□□ 1.05
RAP1B-221ENST00000540209 CWH43Q9H720 699 aa21.64■■□□□ 1.05
RAP1B-221ENST00000540209 UPF2Q9HAU5 1272 aaKnown RBP21.64■■□□□ 1.05
RAP1B-221ENST00000540209 BMP2KQ9NSY1 1161 aaPredicted RBP21.64■■□□□ 1.05
RAP1B-221ENST00000540209 TYW1Q9NV66 732 aaKnown RBP21.64■■□□□ 1.05
RAP1B-221ENST00000540209 HCSTQ9UBK5 93 aa21.64■■□□□ 1.05
RAP1B-221ENST00000540209 U2AF2P26368 475 aaKnown RBP eCLIP21.63■■□□□ 1.051e-7■■□□□ 14.3
RAP1B-221ENST00000540209 TCP11Q8WWU5 503 aa21.63■■□□□ 1.05
RAP1B-221ENST00000540209 XPNPEP1Q9NQW7 623 aa21.63■■□□□ 1.05
RAP1B-221ENST00000540209 ANKEF1Q9NU02 776 aa21.63■■□□□ 1.05
RAP1B-221ENST00000540209 CD2BP2O95400 341 aaKnown RBP21.62■■□□□ 1.05
RAP1B-221ENST00000540209 EOMESO95936 686 aa21.62■■□□□ 1.05
RAP1B-221ENST00000540209 TRAPPC10P48553 1259 aa21.62■■□□□ 1.05
RAP1B-221ENST00000540209 LAMTOR4Q0VGL1 99 aa21.62■■□□□ 1.05
RAP1B-221ENST00000540209 LEXMQ3ZCV2 418 aa21.62■■□□□ 1.05
RAP1B-221ENST00000540209 CLLU1OSQ5K130 101 aa21.62■■□□□ 1.05
RAP1B-221ENST00000540209 PABPC5Q96DU9 382 aaKnown RBP21.62■■□□□ 1.05
RAP1B-221ENST00000540209 TBC1D32Q96NH3 1257 aa21.62■■□□□ 1.05
RAP1B-221ENST00000540209 MTRQ99707 1265 aa21.62■■□□□ 1.05
RAP1B-221ENST00000540209 AAASQ9NRG9 546 aa21.62■■□□□ 1.05
RAP1B-221ENST00000540209 PIN4Q9Y237 131 aaKnown RBP21.62■■□□□ 1.05
RAP1B-221ENST00000540209 PCDHB12Q9Y5F1 795 aa21.62■■□□□ 1.05
RAP1B-221ENST00000540209 ASAP2O43150 1006 aa21.61■■□□□ 1.05
RAP1B-221ENST00000540209 OR52Z1P0C646 297 aa21.61■■□□□ 1.05
RAP1B-221ENST00000540209 SPATA31C1P0DKV0 1188 aa21.61■■□□□ 1.05
RAP1B-221ENST00000540209 KCNA5P22460 613 aa21.61■■□□□ 1.05
RAP1B-221ENST00000540209 PHKA2P46019 1235 aa21.61■■□□□ 1.05
RAP1B-221ENST00000540209 RARRES1P49788 294 aa21.61■■□□□ 1.05
RAP1B-221ENST00000540209 GNL2Q13823 731 aaKnown RBP21.61■■□□□ 1.05
RAP1B-221ENST00000540209 ZNF174Q15697 407 aa21.61■■□□□ 1.05
RAP1B-221ENST00000540209 TTC38Q5R3I4 469 aa21.61■■□□□ 1.05
RAP1B-221ENST00000540209 SPOUT1Q5T280 376 aaKnown RBP21.61■■□□□ 1.05
RAP1B-221ENST00000540209 LRRC55Q6ZSA7 311 aa21.61■■□□□ 1.05
RAP1B-221ENST00000540209 CATSPER4Q7RTX7 472 aa21.61■■□□□ 1.05
RAP1B-221ENST00000540209 SRGAP1Q7Z6B7 1085 aa21.61■■□□□ 1.05
RAP1B-221ENST00000540209 FERMT3Q86UX7 667 aa21.61■■□□□ 1.05
RAP1B-221ENST00000540209 LRRC43Q8N309 656 aa21.61■■□□□ 1.05
RAP1B-221ENST00000540209 COLGALT1Q8NBJ5 622 aa21.61■■□□□ 1.05
RAP1B-221ENST00000540209 TMX3Q96JJ7 454 aa21.61■■□□□ 1.05
RAP1B-221ENST00000540209 NECAB3Q96P71 396 aaPredicted RBP21.61■■□□□ 1.05
RAP1B-221ENST00000540209 MINDY3Q9H8M7 445 aa21.61■■□□□ 1.05
RAP1B-221ENST00000540209 AGPAT5Q9NUQ2 364 aa21.61■■□□□ 1.05
RAP1B-221ENST00000540209 DGAT1O75907 488 aa21.6■■□□□ 1.05
RAP1B-221ENST00000540209 SRGAP2CP0DJJ0 459 aa21.6■■□□□ 1.05
RAP1B-221ENST00000540209 LAG3P18627 525 aa21.6■■□□□ 1.05
RAP1B-221ENST00000540209 TECP42680 631 aa21.6■■□□□ 1.05
RAP1B-221ENST00000540209 HYAL1Q12794 435 aa21.6■■□□□ 1.05
RAP1B-221ENST00000540209 CTC1Q2NKJ3 1217 aa21.6■■□□□ 1.05
RAP1B-221ENST00000540209 ABI1Q8IZP0 508 aa21.6■■□□□ 1.05
RAP1B-221ENST00000540209 RNF169Q8NCN4 708 aa21.6■■□□□ 1.05
RAP1B-221ENST00000540209 POF1BQ8WVV4 589 aa21.6■■□□□ 1.05
RAP1B-221ENST00000540209 TUFT1Q9NNX1 390 aa21.6■■□□□ 1.05
RAP1B-221ENST00000540209 NCK2O43639 380 aa21.59■■□□□ 1.05
RAP1B-221ENST00000540209 MED24O75448 989 aa21.59■■□□□ 1.05
RAP1B-221ENST00000540209 CSPG5O95196 566 aa21.59■■□□□ 1.05
RAP1B-221ENST00000540209 XRCC6P12956 609 aaKnown RBP eCLIP21.59■■□□□ 1.05
RAP1B-221ENST00000540209 IRS1P35568 1242 aa21.59■■□□□ 1.05
RAP1B-221ENST00000540209 UBE3AQ05086 875 aa21.59■■□□□ 1.05
RAP1B-221ENST00000540209 MXD4Q14582 209 aaPredicted RBP21.59■■□□□ 1.05
RAP1B-221ENST00000540209 CSPP1Q1MSJ5 1256 aa21.59■■□□□ 1.05
RAP1B-221ENST00000540209 TWF2Q6IBS0 349 aaKnown RBP21.59■■□□□ 1.05
RAP1B-221ENST00000540209 CATSPER3Q86XQ3 398 aa21.59■■□□□ 1.05
RAP1B-221ENST00000540209 C4orf32Q8N8J7 132 aa21.59■■□□□ 1.05
RAP1B-221ENST00000540209 RNF149Q8NC42 400 aa21.59■■□□□ 1.05
RAP1B-221ENST00000540209 GADD45GIP1Q8TAE8 222 aaPredicted RBP21.59■■□□□ 1.05
RAP1B-221ENST00000540209 PIGOQ8TEQ8 1089 aa21.59■■□□□ 1.05
RAP1B-221ENST00000540209 FAM105AQ9NUU6 356 aa21.59■■□□□ 1.05
RAP1B-221ENST00000540209 NOL7Q9UMY1 257 aaKnown RBP21.59■■□□□ 1.05
RAP1B-221ENST00000540209 ZNF623O75123 536 aa21.58■■□□□ 1.05
RAP1B-221ENST00000540209 FGF18O76093 207 aa21.58■■□□□ 1.05
RAP1B-221ENST00000540209 SKIP12755 728 aa21.58■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms