RNA–Protein interactions for RNA: ENST00000540010.1

TRAF1-202, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 4,303 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-202ENST00000540010 ATF7P17544 494 aaPredicted RBP10.8□□□□□ -0.68
TRAF1-202ENST00000540010 RPA1P27694 616 aa10.8□□□□□ -0.68
TRAF1-202ENST00000540010 APBA1Q02410 837 aa10.8□□□□□ -0.68
TRAF1-202ENST00000540010 LRRC63Q05C16 580 aa10.8□□□□□ -0.68
TRAF1-202ENST00000540010 FAM133BQ5BKY9 247 aaKnown RBP10.8□□□□□ -0.68
TRAF1-202ENST00000540010 NOA1Q8NC60 698 aaKnown RBP10.8□□□□□ -0.68
TRAF1-202ENST00000540010 ETNPPLQ8TBG4 499 aa10.8□□□□□ -0.68
TRAF1-202ENST00000540010 MMS19Q96T76 1030 aa10.8□□□□□ -0.68
TRAF1-202ENST00000540010 FERMT1Q9BQL6 677 aa10.8□□□□□ -0.68
TRAF1-202ENST00000540010 WDR11Q9BZH6 1224 aa10.8□□□□□ -0.68
TRAF1-202ENST00000540010 METTL14Q9HCE5 456 aaKnown RBP10.8□□□□□ -0.68
TRAF1-202ENST00000540010 SORBS3O60504 671 aa10.79□□□□□ -0.68
TRAF1-202ENST00000540010 KCNJ6P48051 423 aa10.79□□□□□ -0.68
TRAF1-202ENST00000540010 HMGCS2P54868 508 aa10.79□□□□□ -0.68
TRAF1-202ENST00000540010 LIN9Q5TKA1 542 aa10.79□□□□□ -0.68
TRAF1-202ENST00000540010 CTAGE3PQ8IX95 158 aa10.79□□□□□ -0.68
TRAF1-202ENST00000540010 DYDC2Q96IM9 177 aa10.79□□□□□ -0.68
TRAF1-202ENST00000540010 TSNARE1Q96NA8 513 aa10.79□□□□□ -0.68
TRAF1-202ENST00000540010 DUSP9Q99956 384 aaKnown RBP10.79□□□□□ -0.68
TRAF1-202ENST00000540010 KIAA1683Q9H0B3 1180 aa10.79□□□□□ -0.68
TRAF1-202ENST00000540010 ZNF541Q9H0D2 1346 aa10.79□□□□□ -0.68
TRAF1-202ENST00000540010 NFIBO00712 420 aa10.79□□□□□ -0.68
TRAF1-202ENST00000540010 N4BP1O75113 896 aaKnown RBP10.79□□□□□ -0.68
TRAF1-202ENST00000540010 GYPCP04921 128 aa10.79□□□□□ -0.68
TRAF1-202ENST00000540010 GCKP35557 465 aa10.79□□□□□ -0.68
TRAF1-202ENST00000540010 SNCBQ16143 134 aa10.79□□□□□ -0.68
TRAF1-202ENST00000540010 EMBQ6PCB8 327 aa10.79□□□□□ -0.68
TRAF1-202ENST00000540010 MIER3Q7Z3K6 550 aa10.79□□□□□ -0.68
TRAF1-202ENST00000540010 LMNTD2Q8IXW0 634 aa10.79□□□□□ -0.68
TRAF1-202ENST00000540010 CCDC197Q8NCU1 140 aa10.79□□□□□ -0.68
TRAF1-202ENST00000540010 SEMA6BQ9H3T3 888 aa10.79□□□□□ -0.68
TRAF1-202ENST00000540010 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.79□□□□□ -0.68
TRAF1-202ENST00000540010 GINS2Q9Y248 185 aa10.79□□□□□ -0.68
TRAF1-202ENST00000540010 COL4A5P29400 1685 aa10.79□□□□□ -0.68
TRAF1-202ENST00000540010 TESPA1A2RU30 521 aaPredicted RBP10.79□□□□□ -0.68
TRAF1-202ENST00000540010 POC1B-GALNT4F8VUJ3 575 aa10.79□□□□□ -0.68
TRAF1-202ENST00000540010 IPO5O00410 1097 aaKnown RBP10.79□□□□□ -0.68
TRAF1-202ENST00000540010 HIP1RO75146 1068 aa10.79□□□□□ -0.68
TRAF1-202ENST00000540010 PRPF6O94906 941 aaKnown RBP10.79□□□□□ -0.68
TRAF1-202ENST00000540010 CYP11B2P19099 503 aa10.79□□□□□ -0.68
TRAF1-202ENST00000540010 VCAM1P19320 739 aa10.79□□□□□ -0.68
TRAF1-202ENST00000540010 PSMC6P62333 389 aa10.79□□□□□ -0.68
TRAF1-202ENST00000540010 SUPT20HL1Q3ZLR7 823 aa10.79□□□□□ -0.68
TRAF1-202ENST00000540010 ARHGEF16Q5VV41 709 aa10.79□□□□□ -0.68
TRAF1-202ENST00000540010 KAZNQ674X7 775 aa10.79□□□□□ -0.68
TRAF1-202ENST00000540010 PHLDB2Q86SQ0 1253 aa10.79□□□□□ -0.68
TRAF1-202ENST00000540010 CCDC13Q8IYE1 715 aa10.79□□□□□ -0.68
TRAF1-202ENST00000540010 ZBED3Q96IU2 234 aaPredicted RBP10.79□□□□□ -0.68
TRAF1-202ENST00000540010 LARSQ9P2J5 1176 aaKnown RBP10.79□□□□□ -0.68
TRAF1-202ENST00000540010 K7ENM7 598 aa10.78□□□□□ -0.68
TRAF1-202ENST00000540010 OPLAHO14841 1288 aa10.78□□□□□ -0.68
TRAF1-202ENST00000540010 CIITAP33076 1130 aa10.78□□□□□ -0.68
TRAF1-202ENST00000540010 PRELPP51888 382 aa10.78□□□□□ -0.68
TRAF1-202ENST00000540010 CLUL1Q15846 466 aa10.78□□□□□ -0.68
TRAF1-202ENST00000540010 CYP4F22Q6NT55 531 aa10.78□□□□□ -0.68
TRAF1-202ENST00000540010 SPATS2Q86XZ4 545 aaKnown RBP10.78□□□□□ -0.68
TRAF1-202ENST00000540010 SCYL3Q8IZE3 742 aa10.78□□□□□ -0.68
TRAF1-202ENST00000540010 ZNF280CQ8ND82 737 aa10.78□□□□□ -0.68
TRAF1-202ENST00000540010 COG1Q8WTW3 980 aa10.78□□□□□ -0.68
TRAF1-202ENST00000540010 PCIF1Q9H4Z3 704 aa10.78□□□□□ -0.68
TRAF1-202ENST00000540010 AGPAT5Q9NUQ2 364 aa10.78□□□□□ -0.68
TRAF1-202ENST00000540010 PARP2Q9UGN5 583 aa10.78□□□□□ -0.68
TRAF1-202ENST00000540010 FEZ2Q9UHY8 353 aaPredicted RBP10.78□□□□□ -0.68
TRAF1-202ENST00000540010 ODF2LQ9ULJ1 636 aa10.78□□□□□ -0.68
TRAF1-202ENST00000540010 COMMD10Q9Y6G5 202 aa10.78□□□□□ -0.68
TRAF1-202ENST00000540010 ITIH6Q6UXX5 1313 aa10.78□□□□□ -0.68
TRAF1-202ENST00000540010 LRRC10BA6NIK2 292 aa10.78□□□□□ -0.68
TRAF1-202ENST00000540010 PPP2R5DQ14738 602 aa10.78□□□□□ -0.68
TRAF1-202ENST00000540010 OTUD6AQ7L8S5 288 aa10.78□□□□□ -0.68
TRAF1-202ENST00000540010 APTXQ7Z2E3 356 aaKnown RBP10.78□□□□□ -0.68
TRAF1-202ENST00000540010 PLAAQ9Y263 795 aa10.78□□□□□ -0.68
TRAF1-202ENST00000540010 AFPP02771 609 aaKnown RBP10.78□□□□□ -0.68
TRAF1-202ENST00000540010 CYP3A4P08684 503 aa10.78□□□□□ -0.68
TRAF1-202ENST00000540010 CCDC38Q502W7 563 aa10.78□□□□□ -0.68
TRAF1-202ENST00000540010 ICE2Q659A1 982 aa10.78□□□□□ -0.68
TRAF1-202ENST00000540010 CENPPQ6IPU0 288 aa10.78□□□□□ -0.68
TRAF1-202ENST00000540010 SFR1Q86XK3 245 aa10.78□□□□□ -0.68
TRAF1-202ENST00000540010 IRF2BP1Q8IU81 584 aa10.78□□□□□ -0.68
TRAF1-202ENST00000540010 SH2D3CQ8N5H7 860 aa10.78□□□□□ -0.68
TRAF1-202ENST00000540010 GLIS3Q8NEA6 775 aa10.78□□□□□ -0.68
TRAF1-202ENST00000540010 LRRC1Q9BTT6 524 aa10.78□□□□□ -0.68
TRAF1-202ENST00000540010 SPON1Q9HCB6 807 aa10.78□□□□□ -0.68
TRAF1-202ENST00000540010 GCNT4Q9P109 453 aa10.78□□□□□ -0.68
TRAF1-202ENST00000540010 PHF20L1A8MW92 1017 aa10.77□□□□□ -0.68
TRAF1-202ENST00000540010 FZD9O00144 591 aa10.77□□□□□ -0.68
TRAF1-202ENST00000540010 SLC26A4O43511 780 aa10.77□□□□□ -0.68
TRAF1-202ENST00000540010 LMNB1P20700 586 aa10.77□□□□□ -0.68
TRAF1-202ENST00000540010 PLA2G4AP47712 749 aa10.77□□□□□ -0.68
TRAF1-202ENST00000540010 TRIP13Q15645 432 aaPredicted RBP10.77□□□□□ -0.68
TRAF1-202ENST00000540010 ALS2CLQ60I27 953 aa10.77□□□□□ -0.68
TRAF1-202ENST00000540010 RNF207Q6ZRF8 634 aa10.77□□□□□ -0.68
TRAF1-202ENST00000540010 FAM186BQ8IYM0 893 aa10.77□□□□□ -0.68
TRAF1-202ENST00000540010 ATG4CQ96DT6 458 aa10.77□□□□□ -0.68
TRAF1-202ENST00000540010 OSBPL9Q96SU4 736 aa10.77□□□□□ -0.68
TRAF1-202ENST00000540010 DDX47Q9H0S4 455 aaKnown RBP10.77□□□□□ -0.68
TRAF1-202ENST00000540010 GINM1Q9NU53 330 aa10.77□□□□□ -0.68
TRAF1-202ENST00000540010 PLA2G6O60733 806 aa10.77□□□□□ -0.69
TRAF1-202ENST00000540010 SERPING1P05155 500 aa10.77□□□□□ -0.69
TRAF1-202ENST00000540010 ARP10275 920 aa10.77□□□□□ -0.69
TRAF1-202ENST00000540010 GBP1P32455 592 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms